Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0317:0315
Extra
PDB:
ATOM 1 O3' U A 316 19.038 124.724 21.582 1.00 56.94 O
ATOM 2 P A A 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A A 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A A 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A A 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A A 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A A 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A A 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A A 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A A 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A A 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A A 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A A 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A A 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A A 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A A 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A A 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A A 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A A 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A A 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A A 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A A 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A A 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C A 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C A 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C A 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C A 318 19.204 127.515 29.138 1.00 51.63 O
TER
ATOM 1 O3' G B 314 10.511 131.005 20.264 1.00 56.05 O
ATOM 2 P A B 315 10.802 129.558 19.631 1.00 57.66 P
ATOM 3 OP1 A B 315 11.448 129.775 18.311 1.00 55.44 O
ATOM 4 OP2 A B 315 9.557 128.756 19.729 1.00 57.46 O
ATOM 5 O5' A B 315 11.887 128.895 20.587 1.00 59.36 O
ATOM 6 C5' A B 315 13.241 129.379 20.635 1.00 57.87 C
ATOM 7 C4' A B 315 14.013 128.625 21.686 1.00 57.66 C
ATOM 8 O4' A B 315 13.400 128.841 22.985 1.00 57.79 O
ATOM 9 C3' A B 315 13.985 127.118 21.516 1.00 57.06 C
ATOM 10 O3' A B 315 14.983 126.692 20.604 1.00 57.02 O
ATOM 11 C2' A B 315 14.259 126.617 22.927 1.00 57.04 C
ATOM 12 O2' A B 315 15.633 126.611 23.258 1.00 54.43 O
ATOM 13 C1' A B 315 13.523 127.664 23.768 1.00 58.03 C
ATOM 14 N9 A B 315 12.190 127.243 24.200 1.00 59.99 N
ATOM 15 C8 A B 315 10.973 127.577 23.665 1.00 59.79 C
ATOM 16 N7 A B 315 9.956 127.036 24.288 1.00 59.94 N
ATOM 17 C5 A B 315 10.543 126.292 25.301 1.00 61.90 C
ATOM 18 C6 A B 315 10.003 125.476 26.315 1.00 62.89 C
ATOM 19 N6 A B 315 8.695 125.265 26.483 1.00 62.92 N
ATOM 20 N1 A B 315 10.868 124.877 27.163 1.00 63.66 N
ATOM 21 C2 A B 315 12.178 125.088 26.997 1.00 62.11 C
ATOM 22 N3 A B 315 12.802 125.829 26.088 1.00 61.06 N
ATOM 23 C4 A B 315 11.918 126.411 25.259 1.00 61.05 C
ATOM 24 P U B 316 14.555 126.104 19.180 1.00 55.96 P
ATOM 25 OP1 U B 316 14.650 127.211 18.208 1.00 58.26 O
ATOM 26 OP2 U B 316 13.269 125.384 19.347 1.00 56.17 O
ATOM 27 O5' U B 316 15.701 125.053 18.849 1.00 55.62 O
TER
ATOM 2 P A A 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A A 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A A 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A A 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A A 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A A 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A A 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A A 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A A 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A A 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A A 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A A 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A A 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A A 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A A 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A A 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A A 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A A 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A A 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A A 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A A 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A A 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C A 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C A 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C A 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C A 318 19.204 127.515 29.138 1.00 51.63 O
TER
ATOM 1 O3' G B 314 10.511 131.005 20.264 1.00 56.05 O
ATOM 2 P A B 315 10.802 129.558 19.631 1.00 57.66 P
ATOM 3 OP1 A B 315 11.448 129.775 18.311 1.00 55.44 O
ATOM 4 OP2 A B 315 9.557 128.756 19.729 1.00 57.46 O
ATOM 5 O5' A B 315 11.887 128.895 20.587 1.00 59.36 O
ATOM 6 C5' A B 315 13.241 129.379 20.635 1.00 57.87 C
ATOM 7 C4' A B 315 14.013 128.625 21.686 1.00 57.66 C
ATOM 8 O4' A B 315 13.400 128.841 22.985 1.00 57.79 O
ATOM 9 C3' A B 315 13.985 127.118 21.516 1.00 57.06 C
ATOM 10 O3' A B 315 14.983 126.692 20.604 1.00 57.02 O
ATOM 11 C2' A B 315 14.259 126.617 22.927 1.00 57.04 C
ATOM 12 O2' A B 315 15.633 126.611 23.258 1.00 54.43 O
ATOM 13 C1' A B 315 13.523 127.664 23.768 1.00 58.03 C
ATOM 14 N9 A B 315 12.190 127.243 24.200 1.00 59.99 N
ATOM 15 C8 A B 315 10.973 127.577 23.665 1.00 59.79 C
ATOM 16 N7 A B 315 9.956 127.036 24.288 1.00 59.94 N
ATOM 17 C5 A B 315 10.543 126.292 25.301 1.00 61.90 C
ATOM 18 C6 A B 315 10.003 125.476 26.315 1.00 62.89 C
ATOM 19 N6 A B 315 8.695 125.265 26.483 1.00 62.92 N
ATOM 20 N1 A B 315 10.868 124.877 27.163 1.00 63.66 N
ATOM 21 C2 A B 315 12.178 125.088 26.997 1.00 62.11 C
ATOM 22 N3 A B 315 12.802 125.829 26.088 1.00 61.06 N
ATOM 23 C4 A B 315 11.918 126.411 25.259 1.00 61.05 C
ATOM 24 P U B 316 14.555 126.104 19.180 1.00 55.96 P
ATOM 25 OP1 U B 316 14.650 127.211 18.208 1.00 58.26 O
ATOM 26 OP2 U B 316 13.269 125.384 19.347 1.00 56.17 O
ATOM 27 O5' U B 316 15.701 125.053 18.849 1.00 55.62 O
TER
Atoms:
OP1: (19.418,123.551,23.728)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
OP1: (11.448,129.775,18.311)
OP2: (9.557,128.756,19.729)
C3': (13.985,127.118,21.516)
C1': (13.523,127.664,23.768)
C5': (13.241,129.379,20.635)
O4': (13.400,128.841,22.985)
C8: (10.973,127.577,23.665)
O2': (15.633,126.611,23.258)
C6: (10.003,125.476,26.315)
C5: (10.543,126.292,25.301)
C4: (11.918,126.411,25.259)
P: (10.802,129.558,19.631)
C4': (14.013,128.625,21.686)
C2': (14.259,126.617,22.927)
C2: (12.178,125.088,26.997)
N1: (10.868,124.877,27.163)
N3: (12.802,125.829,26.088)
N6: (8.695,125.265,26.483)
N7: (9.956,127.036,24.288)
N9: (12.190,127.243,24.200)
O5': (11.887,128.895,20.587)
O3': (14.983,126.692,20.604)
OP2: (9.557,128.756,19.729)
C3': (13.985,127.118,21.516)
C1': (13.523,127.664,23.768)
C5': (13.241,129.379,20.635)
O4': (13.400,128.841,22.985)
C8: (10.973,127.577,23.665)
O2': (15.633,126.611,23.258)
C6: (10.003,125.476,26.315)
C5: (10.543,126.292,25.301)
C4: (11.918,126.411,25.259)
P: (10.802,129.558,19.631)
C4': (14.013,128.625,21.686)
C2': (14.259,126.617,22.927)
C2: (12.178,125.088,26.997)
N1: (10.868,124.877,27.163)
N3: (12.802,125.829,26.088)
N6: (8.695,125.265,26.483)
N7: (9.956,127.036,24.288)
N9: (12.190,127.243,24.200)
O5': (11.887,128.895,20.587)
O3': (14.983,126.692,20.604)
Image (generated by PyMOL):