Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:X4:X3
Extra
PDB:
ATOM 1 O3' A A 3 -52.256 116.242 88.545 1.00 24.39 O
ATOM 2 P A A 4 -51.270 115.244 87.760 1.00 26.89 P
ATOM 3 OP1 A A 4 -49.924 115.870 87.717 1.00 26.89 O
ATOM 4 OP2 A A 4 -51.938 114.870 86.487 1.00 26.89 O
ATOM 5 O5' A A 4 -51.206 113.977 88.735 1.00 10.84 O
ATOM 6 C5' A A 4 -50.342 113.981 89.898 1.00 10.84 C
ATOM 7 C4' A A 4 -50.985 113.249 91.059 1.00 10.84 C
ATOM 8 O4' A A 4 -52.099 114.000 91.584 1.00 10.84 O
ATOM 9 C3' A A 4 -51.563 111.889 90.746 1.00 10.84 C
ATOM 10 O3' A A 4 -50.555 110.907 90.761 1.00 10.84 O
ATOM 11 C2' A A 4 -52.588 111.703 91.849 1.00 10.84 C
ATOM 12 O2' A A 4 -52.030 111.300 93.081 1.00 10.84 O
ATOM 13 C1' A A 4 -53.125 113.121 91.998 1.00 10.84 C
ATOM 14 N9 A A 4 -54.245 113.302 91.084 1.00 14.99 N
ATOM 15 C8 A A 4 -54.246 114.035 89.922 1.00 14.99 C
ATOM 16 N7 A A 4 -55.371 113.964 89.255 1.00 14.99 N
ATOM 17 C5 A A 4 -56.169 113.144 90.035 1.00 14.99 C
ATOM 18 C6 A A 4 -57.468 112.684 89.863 1.00 14.99 C
ATOM 19 N6 A A 4 -58.221 113.015 88.816 1.00 14.99 N
ATOM 20 N1 A A 4 -57.979 111.871 90.810 1.00 14.99 N
ATOM 21 C2 A A 4 -57.214 111.562 91.865 1.00 14.99 C
ATOM 22 N3 A A 4 -55.967 111.943 92.144 1.00 14.99 N
ATOM 23 C4 A A 4 -55.497 112.741 91.174 1.00 14.99 C
ATOM 24 P U A 5 -50.577 109.759 89.653 1.00 27.72 P
ATOM 25 OP1 U A 5 -49.250 109.097 89.731 1.00 44.09 O
ATOM 26 OP2 U A 5 -51.041 110.330 88.364 1.00 44.09 O
ATOM 27 O5' U A 5 -51.709 108.788 90.187 1.00 11.28 O
TER
ATOM 1 O3' A B 2 -50.340 121.874 86.871 1.00 67.32 O
ATOM 2 P A B 3 -49.808 120.429 86.455 1.00 49.96 P
ATOM 3 OP1 A B 3 -48.576 120.165 87.244 1.00 66.33 O
ATOM 4 OP2 A B 3 -49.764 120.356 84.971 1.00 66.33 O
ATOM 5 O5' A B 3 -50.958 119.465 86.966 1.00 24.39 O
ATOM 6 C5' A B 3 -51.141 119.235 88.366 1.00 24.39 C
ATOM 7 C4' A B 3 -52.502 118.644 88.616 1.00 24.39 C
ATOM 8 O4' A B 3 -53.524 119.561 88.135 1.00 24.39 O
ATOM 9 C3' A B 3 -52.798 117.357 87.870 1.00 24.39 C
ATOM 10 O3' A B 3 -52.256 116.242 88.545 1.00 24.39 O
ATOM 11 C2' A B 3 -54.320 117.348 87.833 1.00 24.39 C
ATOM 12 O2' A B 3 -54.895 116.928 89.045 1.00 24.39 O
ATOM 13 C1' A B 3 -54.635 118.830 87.649 1.00 24.39 C
ATOM 14 N9 A B 3 -54.822 119.134 86.233 1.00 74.76 N
ATOM 15 C8 A B 3 -53.908 119.585 85.311 1.00 74.76 C
ATOM 16 N7 A B 3 -54.387 119.675 84.095 1.00 74.76 N
ATOM 17 C5 A B 3 -55.710 119.272 84.228 1.00 74.76 C
ATOM 18 C6 A B 3 -56.758 119.132 83.299 1.00 74.76 C
ATOM 19 N6 A B 3 -56.627 119.374 81.993 1.00 74.76 N
ATOM 20 N1 A B 3 -57.961 118.721 83.764 1.00 74.76 N
ATOM 21 C2 A B 3 -58.088 118.460 85.071 1.00 74.76 C
ATOM 22 N3 A B 3 -57.177 118.542 86.038 1.00 74.76 N
ATOM 23 C4 A B 3 -55.996 118.959 85.543 1.00 74.76 C
ATOM 24 P A B 4 -51.270 115.244 87.760 1.00 26.89 P
ATOM 25 OP1 A B 4 -49.924 115.870 87.717 1.00 26.89 O
ATOM 26 OP2 A B 4 -51.938 114.870 86.487 1.00 26.89 O
ATOM 27 O5' A B 4 -51.206 113.977 88.735 1.00 10.84 O
TER
ATOM 2 P A A 4 -51.270 115.244 87.760 1.00 26.89 P
ATOM 3 OP1 A A 4 -49.924 115.870 87.717 1.00 26.89 O
ATOM 4 OP2 A A 4 -51.938 114.870 86.487 1.00 26.89 O
ATOM 5 O5' A A 4 -51.206 113.977 88.735 1.00 10.84 O
ATOM 6 C5' A A 4 -50.342 113.981 89.898 1.00 10.84 C
ATOM 7 C4' A A 4 -50.985 113.249 91.059 1.00 10.84 C
ATOM 8 O4' A A 4 -52.099 114.000 91.584 1.00 10.84 O
ATOM 9 C3' A A 4 -51.563 111.889 90.746 1.00 10.84 C
ATOM 10 O3' A A 4 -50.555 110.907 90.761 1.00 10.84 O
ATOM 11 C2' A A 4 -52.588 111.703 91.849 1.00 10.84 C
ATOM 12 O2' A A 4 -52.030 111.300 93.081 1.00 10.84 O
ATOM 13 C1' A A 4 -53.125 113.121 91.998 1.00 10.84 C
ATOM 14 N9 A A 4 -54.245 113.302 91.084 1.00 14.99 N
ATOM 15 C8 A A 4 -54.246 114.035 89.922 1.00 14.99 C
ATOM 16 N7 A A 4 -55.371 113.964 89.255 1.00 14.99 N
ATOM 17 C5 A A 4 -56.169 113.144 90.035 1.00 14.99 C
ATOM 18 C6 A A 4 -57.468 112.684 89.863 1.00 14.99 C
ATOM 19 N6 A A 4 -58.221 113.015 88.816 1.00 14.99 N
ATOM 20 N1 A A 4 -57.979 111.871 90.810 1.00 14.99 N
ATOM 21 C2 A A 4 -57.214 111.562 91.865 1.00 14.99 C
ATOM 22 N3 A A 4 -55.967 111.943 92.144 1.00 14.99 N
ATOM 23 C4 A A 4 -55.497 112.741 91.174 1.00 14.99 C
ATOM 24 P U A 5 -50.577 109.759 89.653 1.00 27.72 P
ATOM 25 OP1 U A 5 -49.250 109.097 89.731 1.00 44.09 O
ATOM 26 OP2 U A 5 -51.041 110.330 88.364 1.00 44.09 O
ATOM 27 O5' U A 5 -51.709 108.788 90.187 1.00 11.28 O
TER
ATOM 1 O3' A B 2 -50.340 121.874 86.871 1.00 67.32 O
ATOM 2 P A B 3 -49.808 120.429 86.455 1.00 49.96 P
ATOM 3 OP1 A B 3 -48.576 120.165 87.244 1.00 66.33 O
ATOM 4 OP2 A B 3 -49.764 120.356 84.971 1.00 66.33 O
ATOM 5 O5' A B 3 -50.958 119.465 86.966 1.00 24.39 O
ATOM 6 C5' A B 3 -51.141 119.235 88.366 1.00 24.39 C
ATOM 7 C4' A B 3 -52.502 118.644 88.616 1.00 24.39 C
ATOM 8 O4' A B 3 -53.524 119.561 88.135 1.00 24.39 O
ATOM 9 C3' A B 3 -52.798 117.357 87.870 1.00 24.39 C
ATOM 10 O3' A B 3 -52.256 116.242 88.545 1.00 24.39 O
ATOM 11 C2' A B 3 -54.320 117.348 87.833 1.00 24.39 C
ATOM 12 O2' A B 3 -54.895 116.928 89.045 1.00 24.39 O
ATOM 13 C1' A B 3 -54.635 118.830 87.649 1.00 24.39 C
ATOM 14 N9 A B 3 -54.822 119.134 86.233 1.00 74.76 N
ATOM 15 C8 A B 3 -53.908 119.585 85.311 1.00 74.76 C
ATOM 16 N7 A B 3 -54.387 119.675 84.095 1.00 74.76 N
ATOM 17 C5 A B 3 -55.710 119.272 84.228 1.00 74.76 C
ATOM 18 C6 A B 3 -56.758 119.132 83.299 1.00 74.76 C
ATOM 19 N6 A B 3 -56.627 119.374 81.993 1.00 74.76 N
ATOM 20 N1 A B 3 -57.961 118.721 83.764 1.00 74.76 N
ATOM 21 C2 A B 3 -58.088 118.460 85.071 1.00 74.76 C
ATOM 22 N3 A B 3 -57.177 118.542 86.038 1.00 74.76 N
ATOM 23 C4 A B 3 -55.996 118.959 85.543 1.00 74.76 C
ATOM 24 P A B 4 -51.270 115.244 87.760 1.00 26.89 P
ATOM 25 OP1 A B 4 -49.924 115.870 87.717 1.00 26.89 O
ATOM 26 OP2 A B 4 -51.938 114.870 86.487 1.00 26.89 O
ATOM 27 O5' A B 4 -51.206 113.977 88.735 1.00 10.84 O
TER
Atoms:
OP1: (-49.924,115.870,87.717)
OP2: (-51.938,114.870,86.487)
C3': (-51.563,111.889,90.746)
C1': (-53.125,113.121,91.998)
C5': (-50.342,113.981,89.898)
O4': (-52.099,114.000,91.584)
C8: (-54.246,114.035,89.922)
O2': (-52.030,111.300,93.081)
C6: (-57.468,112.684,89.863)
C5: (-56.169,113.144,90.035)
C4: (-55.497,112.741,91.174)
P: (-51.270,115.244,87.760)
C4': (-50.985,113.249,91.059)
C2': (-52.588,111.703,91.849)
C2: (-57.214,111.562,91.865)
N1: (-57.979,111.871,90.810)
N3: (-55.967,111.943,92.144)
N6: (-58.221,113.015,88.816)
N7: (-55.371,113.964,89.255)
N9: (-54.245,113.302,91.084)
O5': (-51.206,113.977,88.735)
O3': (-50.555,110.907,90.761)
OP2: (-51.938,114.870,86.487)
C3': (-51.563,111.889,90.746)
C1': (-53.125,113.121,91.998)
C5': (-50.342,113.981,89.898)
O4': (-52.099,114.000,91.584)
C8: (-54.246,114.035,89.922)
O2': (-52.030,111.300,93.081)
C6: (-57.468,112.684,89.863)
C5: (-56.169,113.144,90.035)
C4: (-55.497,112.741,91.174)
P: (-51.270,115.244,87.760)
C4': (-50.985,113.249,91.059)
C2': (-52.588,111.703,91.849)
C2: (-57.214,111.562,91.865)
N1: (-57.979,111.871,90.810)
N3: (-55.967,111.943,92.144)
N6: (-58.221,113.015,88.816)
N7: (-55.371,113.964,89.255)
N9: (-54.245,113.302,91.084)
O5': (-51.206,113.977,88.735)
O3': (-50.555,110.907,90.761)
OP1: (-48.576,120.165,87.244)
OP2: (-49.764,120.356,84.971)
C3': (-52.798,117.357,87.870)
C1': (-54.635,118.830,87.649)
C5': (-51.141,119.235,88.366)
O4': (-53.524,119.561,88.135)
C8: (-53.908,119.585,85.311)
O2': (-54.895,116.928,89.045)
C6: (-56.758,119.132,83.299)
C5: (-55.710,119.272,84.228)
C4: (-55.996,118.959,85.543)
P: (-49.808,120.429,86.455)
C4': (-52.502,118.644,88.616)
C2': (-54.320,117.348,87.833)
C2: (-58.088,118.460,85.071)
N1: (-57.961,118.721,83.764)
N3: (-57.177,118.542,86.038)
N6: (-56.627,119.374,81.993)
N7: (-54.387,119.675,84.095)
N9: (-54.822,119.134,86.233)
O5': (-50.958,119.465,86.966)
O3': (-52.256,116.242,88.545)
OP2: (-49.764,120.356,84.971)
C3': (-52.798,117.357,87.870)
C1': (-54.635,118.830,87.649)
C5': (-51.141,119.235,88.366)
O4': (-53.524,119.561,88.135)
C8: (-53.908,119.585,85.311)
O2': (-54.895,116.928,89.045)
C6: (-56.758,119.132,83.299)
C5: (-55.710,119.272,84.228)
C4: (-55.996,118.959,85.543)
P: (-49.808,120.429,86.455)
C4': (-52.502,118.644,88.616)
C2': (-54.320,117.348,87.833)
C2: (-58.088,118.460,85.071)
N1: (-57.961,118.721,83.764)
N3: (-57.177,118.542,86.038)
N6: (-56.627,119.374,81.993)
N7: (-54.387,119.675,84.095)
N9: (-54.822,119.134,86.233)
O5': (-50.958,119.465,86.966)
O3': (-52.256,116.242,88.545)
Image (generated by PyMOL):