Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02236:02235
Extra
PDB:
ATOM 1 O3' A A2235 51.102 75.860 76.866 1.00 38.05 O
ATOM 2 P A A2236 51.638 74.864 75.727 1.00 40.40 P
ATOM 3 OP1 A A2236 50.467 74.118 75.198 1.00 39.48 O
ATOM 4 OP2 A A2236 52.810 74.120 76.251 1.00 39.10 O
ATOM 5 O5' A A2236 52.156 75.854 74.590 1.00 42.31 O
ATOM 6 C5' A A2236 51.306 76.264 73.487 1.00 38.58 C
ATOM 7 C4' A A2236 51.911 77.462 72.796 1.00 38.32 C
ATOM 8 O4' A A2236 51.672 78.651 73.585 1.00 39.72 O
ATOM 9 C3' A A2236 53.420 77.391 72.630 1.00 38.08 C
ATOM 10 O3' A A2236 53.756 76.725 71.422 1.00 37.91 O
ATOM 11 C2' A A2236 53.831 78.855 72.615 1.00 37.69 C
ATOM 12 O2' A A2236 53.608 79.443 71.350 1.00 39.21 O
ATOM 13 C1' A A2236 52.833 79.459 73.604 1.00 36.57 C
ATOM 14 N9 A A2236 53.263 79.567 74.996 1.00 36.51 N
ATOM 15 C8 A A2236 52.780 78.831 76.052 1.00 37.13 C
ATOM 16 N7 A A2236 53.251 79.200 77.215 1.00 38.43 N
ATOM 17 C5 A A2236 54.120 80.235 76.910 1.00 37.22 C
ATOM 18 C6 A A2236 54.918 81.064 77.716 1.00 36.74 C
ATOM 19 N6 A A2236 54.944 80.998 79.053 1.00 31.33 N
ATOM 20 N1 A A2236 55.689 81.983 77.094 1.00 36.97 N
ATOM 21 C2 A A2236 55.639 82.064 75.758 1.00 35.94 C
ATOM 22 N3 A A2236 54.915 81.358 74.896 1.00 35.43 N
ATOM 23 C4 A A2236 54.165 80.450 75.541 1.00 36.65 C
ATOM 24 P C A2237 54.982 75.698 71.397 1.00 39.18 P
ATOM 25 OP1 C A2237 55.031 75.096 70.037 1.00 38.91 O
ATOM 26 OP2 C A2237 54.882 74.823 72.596 1.00 38.61 O
ATOM 27 O5' C A2237 56.262 76.622 71.585 1.00 39.16 O
TER
ATOM 1 O3' C B2234 47.084 73.643 81.532 1.00 35.79 O
ATOM 2 P A B2235 46.570 74.455 80.251 1.00 34.73 P
ATOM 3 OP1 A B2235 46.382 75.862 80.680 1.00 34.85 O
ATOM 4 OP2 A B2235 45.439 73.731 79.640 1.00 38.36 O
ATOM 5 O5' A B2235 47.803 74.398 79.246 1.00 34.40 O
ATOM 6 C5' A B2235 47.677 74.894 77.900 1.00 34.39 C
ATOM 7 C4' A B2235 48.812 75.844 77.564 1.00 35.02 C
ATOM 8 O4' A B2235 48.642 77.105 78.272 1.00 35.60 O
ATOM 9 C3' A B2235 50.230 75.374 77.876 1.00 35.94 C
ATOM 10 O3' A B2235 51.102 75.860 76.866 1.00 38.05 O
ATOM 11 C2' A B2235 50.533 76.100 79.182 1.00 34.43 C
ATOM 12 O2' A B2235 51.910 76.299 79.408 1.00 36.47 O
ATOM 13 C1' A B2235 49.846 77.435 78.931 1.00 33.84 C
ATOM 14 N9 A B2235 49.541 78.211 80.132 1.00 34.19 N
ATOM 15 C8 A B2235 48.620 77.945 81.112 1.00 34.07 C
ATOM 16 N7 A B2235 48.593 78.840 82.072 1.00 34.45 N
ATOM 17 C5 A B2235 49.564 79.757 81.700 1.00 33.96 C
ATOM 18 C6 A B2235 50.026 80.941 82.299 1.00 33.32 C
ATOM 19 N6 A B2235 49.561 81.409 83.458 1.00 30.10 N
ATOM 20 N1 A B2235 50.998 81.634 81.659 1.00 32.33 N
ATOM 21 C2 A B2235 51.469 81.155 80.507 1.00 31.34 C
ATOM 22 N3 A B2235 51.122 80.051 79.850 1.00 33.50 N
ATOM 23 C4 A B2235 50.152 79.388 80.504 1.00 34.35 C
ATOM 24 P A B2236 51.638 74.864 75.727 1.00 40.40 P
ATOM 25 OP1 A B2236 50.467 74.118 75.198 1.00 39.48 O
ATOM 26 OP2 A B2236 52.810 74.120 76.251 1.00 39.10 O
ATOM 27 O5' A B2236 52.156 75.854 74.590 1.00 42.31 O
TER
ATOM 2 P A A2236 51.638 74.864 75.727 1.00 40.40 P
ATOM 3 OP1 A A2236 50.467 74.118 75.198 1.00 39.48 O
ATOM 4 OP2 A A2236 52.810 74.120 76.251 1.00 39.10 O
ATOM 5 O5' A A2236 52.156 75.854 74.590 1.00 42.31 O
ATOM 6 C5' A A2236 51.306 76.264 73.487 1.00 38.58 C
ATOM 7 C4' A A2236 51.911 77.462 72.796 1.00 38.32 C
ATOM 8 O4' A A2236 51.672 78.651 73.585 1.00 39.72 O
ATOM 9 C3' A A2236 53.420 77.391 72.630 1.00 38.08 C
ATOM 10 O3' A A2236 53.756 76.725 71.422 1.00 37.91 O
ATOM 11 C2' A A2236 53.831 78.855 72.615 1.00 37.69 C
ATOM 12 O2' A A2236 53.608 79.443 71.350 1.00 39.21 O
ATOM 13 C1' A A2236 52.833 79.459 73.604 1.00 36.57 C
ATOM 14 N9 A A2236 53.263 79.567 74.996 1.00 36.51 N
ATOM 15 C8 A A2236 52.780 78.831 76.052 1.00 37.13 C
ATOM 16 N7 A A2236 53.251 79.200 77.215 1.00 38.43 N
ATOM 17 C5 A A2236 54.120 80.235 76.910 1.00 37.22 C
ATOM 18 C6 A A2236 54.918 81.064 77.716 1.00 36.74 C
ATOM 19 N6 A A2236 54.944 80.998 79.053 1.00 31.33 N
ATOM 20 N1 A A2236 55.689 81.983 77.094 1.00 36.97 N
ATOM 21 C2 A A2236 55.639 82.064 75.758 1.00 35.94 C
ATOM 22 N3 A A2236 54.915 81.358 74.896 1.00 35.43 N
ATOM 23 C4 A A2236 54.165 80.450 75.541 1.00 36.65 C
ATOM 24 P C A2237 54.982 75.698 71.397 1.00 39.18 P
ATOM 25 OP1 C A2237 55.031 75.096 70.037 1.00 38.91 O
ATOM 26 OP2 C A2237 54.882 74.823 72.596 1.00 38.61 O
ATOM 27 O5' C A2237 56.262 76.622 71.585 1.00 39.16 O
TER
ATOM 1 O3' C B2234 47.084 73.643 81.532 1.00 35.79 O
ATOM 2 P A B2235 46.570 74.455 80.251 1.00 34.73 P
ATOM 3 OP1 A B2235 46.382 75.862 80.680 1.00 34.85 O
ATOM 4 OP2 A B2235 45.439 73.731 79.640 1.00 38.36 O
ATOM 5 O5' A B2235 47.803 74.398 79.246 1.00 34.40 O
ATOM 6 C5' A B2235 47.677 74.894 77.900 1.00 34.39 C
ATOM 7 C4' A B2235 48.812 75.844 77.564 1.00 35.02 C
ATOM 8 O4' A B2235 48.642 77.105 78.272 1.00 35.60 O
ATOM 9 C3' A B2235 50.230 75.374 77.876 1.00 35.94 C
ATOM 10 O3' A B2235 51.102 75.860 76.866 1.00 38.05 O
ATOM 11 C2' A B2235 50.533 76.100 79.182 1.00 34.43 C
ATOM 12 O2' A B2235 51.910 76.299 79.408 1.00 36.47 O
ATOM 13 C1' A B2235 49.846 77.435 78.931 1.00 33.84 C
ATOM 14 N9 A B2235 49.541 78.211 80.132 1.00 34.19 N
ATOM 15 C8 A B2235 48.620 77.945 81.112 1.00 34.07 C
ATOM 16 N7 A B2235 48.593 78.840 82.072 1.00 34.45 N
ATOM 17 C5 A B2235 49.564 79.757 81.700 1.00 33.96 C
ATOM 18 C6 A B2235 50.026 80.941 82.299 1.00 33.32 C
ATOM 19 N6 A B2235 49.561 81.409 83.458 1.00 30.10 N
ATOM 20 N1 A B2235 50.998 81.634 81.659 1.00 32.33 N
ATOM 21 C2 A B2235 51.469 81.155 80.507 1.00 31.34 C
ATOM 22 N3 A B2235 51.122 80.051 79.850 1.00 33.50 N
ATOM 23 C4 A B2235 50.152 79.388 80.504 1.00 34.35 C
ATOM 24 P A B2236 51.638 74.864 75.727 1.00 40.40 P
ATOM 25 OP1 A B2236 50.467 74.118 75.198 1.00 39.48 O
ATOM 26 OP2 A B2236 52.810 74.120 76.251 1.00 39.10 O
ATOM 27 O5' A B2236 52.156 75.854 74.590 1.00 42.31 O
TER
Atoms:
OP1: (50.467,74.118,75.198)
OP2: (52.810,74.120,76.251)
C3': (53.420,77.391,72.630)
C1': (52.833,79.459,73.604)
C5': (51.306,76.264,73.487)
O4': (51.672,78.651,73.585)
C8: (52.780,78.831,76.052)
O2': (53.608,79.443,71.350)
C6: (54.918,81.064,77.716)
C5: (54.120,80.235,76.910)
C4: (54.165,80.450,75.541)
P: (51.638,74.864,75.727)
C4': (51.911,77.462,72.796)
C2': (53.831,78.855,72.615)
C2: (55.639,82.064,75.758)
N1: (55.689,81.983,77.094)
N3: (54.915,81.358,74.896)
N6: (54.944,80.998,79.053)
N7: (53.251,79.200,77.215)
N9: (53.263,79.567,74.996)
O5': (52.156,75.854,74.590)
O3': (53.756,76.725,71.422)
OP2: (52.810,74.120,76.251)
C3': (53.420,77.391,72.630)
C1': (52.833,79.459,73.604)
C5': (51.306,76.264,73.487)
O4': (51.672,78.651,73.585)
C8: (52.780,78.831,76.052)
O2': (53.608,79.443,71.350)
C6: (54.918,81.064,77.716)
C5: (54.120,80.235,76.910)
C4: (54.165,80.450,75.541)
P: (51.638,74.864,75.727)
C4': (51.911,77.462,72.796)
C2': (53.831,78.855,72.615)
C2: (55.639,82.064,75.758)
N1: (55.689,81.983,77.094)
N3: (54.915,81.358,74.896)
N6: (54.944,80.998,79.053)
N7: (53.251,79.200,77.215)
N9: (53.263,79.567,74.996)
O5': (52.156,75.854,74.590)
O3': (53.756,76.725,71.422)
OP1: (46.382,75.862,80.680)
OP2: (45.439,73.731,79.640)
C3': (50.230,75.374,77.876)
C1': (49.846,77.435,78.931)
C5': (47.677,74.894,77.900)
O4': (48.642,77.105,78.272)
C8: (48.620,77.945,81.112)
O2': (51.910,76.299,79.408)
C6: (50.026,80.941,82.299)
C5: (49.564,79.757,81.700)
C4: (50.152,79.388,80.504)
P: (46.570,74.455,80.251)
C4': (48.812,75.844,77.564)
C2': (50.533,76.100,79.182)
C2: (51.469,81.155,80.507)
N1: (50.998,81.634,81.659)
N3: (51.122,80.051,79.850)
N6: (49.561,81.409,83.458)
N7: (48.593,78.840,82.072)
N9: (49.541,78.211,80.132)
O5': (47.803,74.398,79.246)
O3': (51.102,75.860,76.866)
OP2: (45.439,73.731,79.640)
C3': (50.230,75.374,77.876)
C1': (49.846,77.435,78.931)
C5': (47.677,74.894,77.900)
O4': (48.642,77.105,78.272)
C8: (48.620,77.945,81.112)
O2': (51.910,76.299,79.408)
C6: (50.026,80.941,82.299)
C5: (49.564,79.757,81.700)
C4: (50.152,79.388,80.504)
P: (46.570,74.455,80.251)
C4': (48.812,75.844,77.564)
C2': (50.533,76.100,79.182)
C2: (51.469,81.155,80.507)
N1: (50.998,81.634,81.659)
N3: (51.122,80.051,79.850)
N6: (49.561,81.409,83.458)
N7: (48.593,78.840,82.072)
N9: (49.541,78.211,80.132)
O5': (47.803,74.398,79.246)
O3': (51.102,75.860,76.866)
Image (generated by PyMOL):