ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXM:B21:B20

Extra

PDB:
ATOM 1 O3' A A 20 -14.425 -39.676 47.297 1.00 92.36 O
ATOM 2 P A A 21 -13.829 -38.197 47.405 1.00 91.96 P
ATOM 3 OP1 A A 21 -12.366 -38.281 47.176 1.00 91.66 O
ATOM 4 OP2 A A 21 -14.343 -37.570 48.644 1.00 92.44 O
ATOM 5 O5' A A 21 -14.515 -37.487 46.142 1.00 91.02 O
ATOM 6 C5' A A 21 -14.170 -37.919 44.817 1.00 89.19 C
ATOM 7 C4' A A 21 -15.245 -37.593 43.791 1.00 87.73 C
ATOM 8 O4' A A 21 -16.451 -38.357 44.059 1.00 87.92 O
ATOM 9 C3' A A 21 -15.681 -36.135 43.763 1.00 86.81 C
ATOM 10 O3' A A 21 -14.832 -35.396 42.879 1.00 84.13 O
ATOM 11 C2' A A 21 -17.130 -36.230 43.283 1.00 87.55 C
ATOM 12 O2' A A 21 -17.261 -36.285 41.874 1.00 87.71 O
ATOM 13 C1' A A 21 -17.600 -37.539 43.917 1.00 88.04 C
ATOM 14 N9 A A 21 -18.239 -37.370 45.228 1.00 88.86 N
ATOM 15 C8 A A 21 -17.724 -37.722 46.450 1.00 89.02 C
ATOM 16 N7 A A 21 -18.510 -37.456 47.465 1.00 89.33 N
ATOM 17 C5 A A 21 -19.626 -36.887 46.873 1.00 89.47 C
ATOM 18 C6 A A 21 -20.833 -36.384 47.409 1.00 89.72 C
ATOM 19 N6 A A 21 -21.104 -36.381 48.720 1.00 89.68 N
ATOM 20 N1 A A 21 -21.746 -35.880 46.545 1.00 89.91 N
ATOM 21 C2 A A 21 -21.470 -35.883 45.230 1.00 89.75 C
ATOM 22 N3 A A 21 -20.372 -36.327 44.610 1.00 89.44 N
ATOM 23 C4 A A 21 -19.479 -36.823 45.493 1.00 89.30 C
ATOM 24 P U A 22 -14.178 -34.000 43.331 1.00 82.12 P
ATOM 25 OP1 U A 22 -13.159 -33.629 42.323 1.00 81.50 O
ATOM 26 OP2 U A 22 -13.794 -34.097 44.760 1.00 81.96 O
ATOM 27 O5' U A 22 -15.414 -32.983 43.192 1.00 80.58 O
TER

ATOM 1 O3' U B 19 -15.192 -38.224 53.208 1.00 84.06 O
ATOM 2 P A B 20 -14.762 -39.738 52.911 1.00 86.58 P
ATOM 3 OP1 A B 20 -15.802 -40.623 53.492 1.00 86.47 O
ATOM 4 OP2 A B 20 -13.341 -39.895 53.310 1.00 86.49 O
ATOM 5 O5' A B 20 -14.833 -39.811 51.311 1.00 87.86 O
ATOM 6 C5' A B 20 -15.201 -41.016 50.652 1.00 90.42 C
ATOM 7 C4' A B 20 -14.636 -41.039 49.241 1.00 92.34 C
ATOM 8 O4' A B 20 -14.671 -42.387 48.697 1.00 93.62 O
ATOM 9 C3' A B 20 -15.377 -40.177 48.226 1.00 93.05 C
ATOM 10 O3' A B 20 -14.425 -39.676 47.297 1.00 92.36 O
ATOM 11 C2' A B 20 -16.331 -41.170 47.567 1.00 93.97 C
ATOM 12 O2' A B 20 -16.725 -40.772 46.268 1.00 93.88 O
ATOM 13 C1' A B 20 -15.444 -42.415 47.507 1.00 94.69 C
ATOM 14 N9 A B 20 -16.137 -43.707 47.457 1.00 96.46 N
ATOM 15 C8 A B 20 -17.426 -43.990 47.838 1.00 97.28 C
ATOM 16 N7 A B 20 -17.766 -45.250 47.684 1.00 97.68 N
ATOM 17 C5 A B 20 -16.620 -45.841 47.170 1.00 97.64 C
ATOM 18 C6 A B 20 -16.319 -47.170 46.786 1.00 97.81 C
ATOM 19 N6 A B 20 -17.198 -48.176 46.869 1.00 98.08 N
ATOM 20 N1 A B 20 -15.076 -47.427 46.309 1.00 97.70 N
ATOM 21 C2 A B 20 -14.189 -46.419 46.224 1.00 97.47 C
ATOM 22 N3 A B 20 -14.357 -45.134 46.554 1.00 97.24 N
ATOM 23 C4 A B 20 -15.603 -44.906 47.025 1.00 97.15 C
ATOM 24 P A B 21 -13.829 -38.197 47.405 1.00 91.96 P
ATOM 25 OP1 A B 21 -12.366 -38.281 47.176 1.00 91.66 O
ATOM 26 OP2 A B 21 -14.343 -37.570 48.644 1.00 92.44 O
ATOM 27 O5' A B 21 -14.515 -37.487 46.142 1.00 91.02 O
TER

Atoms:
OP1: (-12.366,-38.281,47.176)
OP2: (-14.343,-37.570,48.644)
C3': (-15.681,-36.135,43.763)
C1': (-17.600,-37.539,43.917)
C5': (-14.170,-37.919,44.817)
O4': (-16.451,-38.357,44.059)
C8: (-17.724,-37.722,46.450)
O2': (-17.261,-36.285,41.874)
C6: (-20.833,-36.384,47.409)
C5: (-19.626,-36.887,46.873)
C4: (-19.479,-36.823,45.493)
P: (-13.829,-38.197,47.405)
C4': (-15.245,-37.593,43.791)
C2': (-17.130,-36.230,43.283)
C2: (-21.470,-35.883,45.230)
N1: (-21.746,-35.880,46.545)
N3: (-20.372,-36.327,44.610)
N6: (-21.104,-36.381,48.720)
N7: (-18.510,-37.456,47.465)
N9: (-18.239,-37.370,45.228)
O5': (-14.515,-37.487,46.142)
O3': (-14.832,-35.396,42.879)
OP1: (-15.802,-40.623,53.492)
OP2: (-13.341,-39.895,53.310)
C3': (-15.377,-40.177,48.226)
C1': (-15.444,-42.415,47.507)
C5': (-15.201,-41.016,50.652)
O4': (-14.671,-42.387,48.697)
C8: (-17.426,-43.990,47.838)
O2': (-16.725,-40.772,46.268)
C6: (-16.319,-47.170,46.786)
C5: (-16.620,-45.841,47.170)
C4: (-15.603,-44.906,47.025)
P: (-14.762,-39.738,52.911)
C4': (-14.636,-41.039,49.241)
C2': (-16.331,-41.170,47.567)
C2: (-14.189,-46.419,46.224)
N1: (-15.076,-47.427,46.309)
N3: (-14.357,-45.134,46.554)
N6: (-17.198,-48.176,46.869)
N7: (-17.766,-45.250,47.684)
N9: (-16.137,-43.707,47.457)
O5': (-14.833,-39.811,51.311)
O3': (-14.425,-39.676,47.297)
Image (generated by PyMOL):
PyMOL image
show in jmol