Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B63:B62
Extra
PDB:
ATOM 1 O3' A A 62 -6.045 -29.004 13.768 1.00 62.46 O
ATOM 2 P A A 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 3 OP1 A A 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 4 OP2 A A 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 5 O5' A A 63 -4.934 -30.080 15.709 1.00 61.15 O
ATOM 6 C5' A A 63 -5.007 -31.057 16.733 1.00 60.34 C
ATOM 7 C4' A A 63 -4.605 -32.408 16.173 1.00 60.03 C
ATOM 8 O4' A A 63 -5.646 -32.896 15.284 1.00 60.03 O
ATOM 9 C3' A A 63 -3.304 -32.441 15.361 1.00 60.16 C
ATOM 10 O3' A A 63 -2.589 -33.629 15.623 1.00 60.10 O
ATOM 11 C2' A A 63 -3.809 -32.511 13.931 1.00 60.29 C
ATOM 12 O2' A A 63 -2.883 -33.100 13.043 1.00 60.22 O
ATOM 13 C1' A A 63 -5.012 -33.420 14.138 1.00 60.01 C
ATOM 14 N9 A A 63 -5.908 -33.422 12.991 1.00 60.30 N
ATOM 15 C8 A A 63 -6.459 -32.340 12.362 1.00 60.75 C
ATOM 16 N7 A A 63 -7.216 -32.653 11.339 1.00 61.04 N
ATOM 17 C5 A A 63 -7.153 -34.034 11.297 1.00 60.53 C
ATOM 18 C6 A A 63 -7.741 -34.984 10.441 1.00 60.36 C
ATOM 19 N6 A A 63 -8.539 -34.639 9.433 1.00 61.12 N
ATOM 20 N1 A A 63 -7.483 -36.293 10.664 1.00 59.93 N
ATOM 21 C2 A A 63 -6.680 -36.631 11.685 1.00 59.61 C
ATOM 22 N3 A A 63 -6.066 -35.827 12.556 1.00 59.85 N
ATOM 23 C4 A A 63 -6.348 -34.530 12.307 1.00 60.32 C
ATOM 24 P C A 64 -1.369 -33.664 16.638 1.00 60.56 P
ATOM 25 OP1 C A 64 -0.687 -34.967 16.451 1.00 60.53 O
ATOM 26 OP2 C A 64 -1.902 -33.291 17.962 1.00 61.09 O
ATOM 27 O5' C A 64 -0.377 -32.530 16.115 1.00 61.47 O
TER
ATOM 1 O3' A B 61 -6.077 -23.450 11.140 1.00 69.84 O
ATOM 2 P A B 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 3 OP1 A B 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 4 OP2 A B 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 5 O5' A B 62 -5.726 -25.286 12.780 1.00 66.82 O
ATOM 6 C5' A B 62 -6.487 -26.294 12.120 1.00 65.31 C
ATOM 7 C4' A B 62 -5.623 -27.521 11.919 1.00 64.12 C
ATOM 8 O4' A B 62 -4.428 -27.151 11.187 1.00 64.17 O
ATOM 9 C3' A B 62 -5.078 -28.154 13.190 1.00 63.10 C
ATOM 10 O3' A B 62 -6.045 -29.004 13.768 1.00 62.46 O
ATOM 11 C2' A B 62 -3.880 -28.920 12.643 1.00 62.87 C
ATOM 12 O2' A B 62 -4.228 -30.100 11.946 1.00 63.04 O
ATOM 13 C1' A B 62 -3.323 -27.908 11.649 1.00 63.25 C
ATOM 14 N9 A B 62 -2.320 -27.034 12.258 1.00 62.82 N
ATOM 15 C8 A B 62 -2.514 -25.793 12.794 1.00 63.36 C
ATOM 16 N7 A B 62 -1.427 -25.248 13.283 1.00 63.38 N
ATOM 17 C5 A B 62 -0.454 -26.200 13.052 1.00 62.83 C
ATOM 18 C6 A B 62 0.925 -26.230 13.334 1.00 62.98 C
ATOM 19 N6 A B 62 1.566 -25.225 13.940 1.00 63.38 N
ATOM 20 N1 A B 62 1.616 -27.334 12.972 1.00 62.56 N
ATOM 21 C2 A B 62 0.969 -28.340 12.366 1.00 61.81 C
ATOM 22 N3 A B 62 -0.322 -28.419 12.052 1.00 61.62 N
ATOM 23 C4 A B 62 -0.984 -27.310 12.424 1.00 62.20 C
ATOM 24 P A B 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 25 OP1 A B 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 26 OP2 A B 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 27 O5' A B 63 -4.934 -30.080 15.709 1.00 61.15 O
TER
ATOM 2 P A A 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 3 OP1 A A 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 4 OP2 A A 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 5 O5' A A 63 -4.934 -30.080 15.709 1.00 61.15 O
ATOM 6 C5' A A 63 -5.007 -31.057 16.733 1.00 60.34 C
ATOM 7 C4' A A 63 -4.605 -32.408 16.173 1.00 60.03 C
ATOM 8 O4' A A 63 -5.646 -32.896 15.284 1.00 60.03 O
ATOM 9 C3' A A 63 -3.304 -32.441 15.361 1.00 60.16 C
ATOM 10 O3' A A 63 -2.589 -33.629 15.623 1.00 60.10 O
ATOM 11 C2' A A 63 -3.809 -32.511 13.931 1.00 60.29 C
ATOM 12 O2' A A 63 -2.883 -33.100 13.043 1.00 60.22 O
ATOM 13 C1' A A 63 -5.012 -33.420 14.138 1.00 60.01 C
ATOM 14 N9 A A 63 -5.908 -33.422 12.991 1.00 60.30 N
ATOM 15 C8 A A 63 -6.459 -32.340 12.362 1.00 60.75 C
ATOM 16 N7 A A 63 -7.216 -32.653 11.339 1.00 61.04 N
ATOM 17 C5 A A 63 -7.153 -34.034 11.297 1.00 60.53 C
ATOM 18 C6 A A 63 -7.741 -34.984 10.441 1.00 60.36 C
ATOM 19 N6 A A 63 -8.539 -34.639 9.433 1.00 61.12 N
ATOM 20 N1 A A 63 -7.483 -36.293 10.664 1.00 59.93 N
ATOM 21 C2 A A 63 -6.680 -36.631 11.685 1.00 59.61 C
ATOM 22 N3 A A 63 -6.066 -35.827 12.556 1.00 59.85 N
ATOM 23 C4 A A 63 -6.348 -34.530 12.307 1.00 60.32 C
ATOM 24 P C A 64 -1.369 -33.664 16.638 1.00 60.56 P
ATOM 25 OP1 C A 64 -0.687 -34.967 16.451 1.00 60.53 O
ATOM 26 OP2 C A 64 -1.902 -33.291 17.962 1.00 61.09 O
ATOM 27 O5' C A 64 -0.377 -32.530 16.115 1.00 61.47 O
TER
ATOM 1 O3' A B 61 -6.077 -23.450 11.140 1.00 69.84 O
ATOM 2 P A B 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 3 OP1 A B 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 4 OP2 A B 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 5 O5' A B 62 -5.726 -25.286 12.780 1.00 66.82 O
ATOM 6 C5' A B 62 -6.487 -26.294 12.120 1.00 65.31 C
ATOM 7 C4' A B 62 -5.623 -27.521 11.919 1.00 64.12 C
ATOM 8 O4' A B 62 -4.428 -27.151 11.187 1.00 64.17 O
ATOM 9 C3' A B 62 -5.078 -28.154 13.190 1.00 63.10 C
ATOM 10 O3' A B 62 -6.045 -29.004 13.768 1.00 62.46 O
ATOM 11 C2' A B 62 -3.880 -28.920 12.643 1.00 62.87 C
ATOM 12 O2' A B 62 -4.228 -30.100 11.946 1.00 63.04 O
ATOM 13 C1' A B 62 -3.323 -27.908 11.649 1.00 63.25 C
ATOM 14 N9 A B 62 -2.320 -27.034 12.258 1.00 62.82 N
ATOM 15 C8 A B 62 -2.514 -25.793 12.794 1.00 63.36 C
ATOM 16 N7 A B 62 -1.427 -25.248 13.283 1.00 63.38 N
ATOM 17 C5 A B 62 -0.454 -26.200 13.052 1.00 62.83 C
ATOM 18 C6 A B 62 0.925 -26.230 13.334 1.00 62.98 C
ATOM 19 N6 A B 62 1.566 -25.225 13.940 1.00 63.38 N
ATOM 20 N1 A B 62 1.616 -27.334 12.972 1.00 62.56 N
ATOM 21 C2 A B 62 0.969 -28.340 12.366 1.00 61.81 C
ATOM 22 N3 A B 62 -0.322 -28.419 12.052 1.00 61.62 N
ATOM 23 C4 A B 62 -0.984 -27.310 12.424 1.00 62.20 C
ATOM 24 P A B 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 25 OP1 A B 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 26 OP2 A B 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 27 O5' A B 63 -4.934 -30.080 15.709 1.00 61.15 O
TER
Atoms:
OP1: (-7.437,-29.844,15.629)
OP2: (-5.907,-27.813,15.983)
C3': (-3.304,-32.441,15.361)
C1': (-5.012,-33.420,14.138)
C5': (-5.007,-31.057,16.733)
O4': (-5.646,-32.896,15.284)
C8: (-6.459,-32.340,12.362)
O2': (-2.883,-33.100,13.043)
C6: (-7.741,-34.984,10.441)
C5: (-7.153,-34.034,11.297)
C4: (-6.348,-34.530,12.307)
P: (-6.168,-29.132,15.357)
C4': (-4.605,-32.408,16.173)
C2': (-3.809,-32.511,13.931)
C2: (-6.680,-36.631,11.685)
N1: (-7.483,-36.293,10.664)
N3: (-6.066,-35.827,12.556)
N6: (-8.539,-34.639,9.433)
N7: (-7.216,-32.653,11.339)
N9: (-5.908,-33.422,12.991)
O5': (-4.934,-30.080,15.709)
O3': (-2.589,-33.629,15.623)
OP2: (-5.907,-27.813,15.983)
C3': (-3.304,-32.441,15.361)
C1': (-5.012,-33.420,14.138)
C5': (-5.007,-31.057,16.733)
O4': (-5.646,-32.896,15.284)
C8: (-6.459,-32.340,12.362)
O2': (-2.883,-33.100,13.043)
C6: (-7.741,-34.984,10.441)
C5: (-7.153,-34.034,11.297)
C4: (-6.348,-34.530,12.307)
P: (-6.168,-29.132,15.357)
C4': (-4.605,-32.408,16.173)
C2': (-3.809,-32.511,13.931)
C2: (-6.680,-36.631,11.685)
N1: (-7.483,-36.293,10.664)
N3: (-6.066,-35.827,12.556)
N6: (-8.539,-34.639,9.433)
N7: (-7.216,-32.653,11.339)
N9: (-5.908,-33.422,12.991)
O5': (-4.934,-30.080,15.709)
O3': (-2.589,-33.629,15.623)
OP1: (-7.567,-23.596,13.109)
OP2: (-5.102,-22.977,13.419)
C3': (-5.078,-28.154,13.190)
C1': (-3.323,-27.908,11.649)
C5': (-6.487,-26.294,12.120)
O4': (-4.428,-27.151,11.187)
C8: (-2.514,-25.793,12.794)
O2': (-4.228,-30.100,11.946)
C6: (0.925,-26.230,13.334)
C5: (-0.454,-26.200,13.052)
C4: (-0.984,-27.310,12.424)
P: (-6.149,-23.747,12.711)
C4': (-5.623,-27.521,11.919)
C2': (-3.880,-28.920,12.643)
C2: (0.969,-28.340,12.366)
N1: (1.616,-27.334,12.972)
N3: (-0.322,-28.419,12.052)
N6: (1.566,-25.225,13.940)
N7: (-1.427,-25.248,13.283)
N9: (-2.320,-27.034,12.258)
O5': (-5.726,-25.286,12.780)
O3': (-6.045,-29.004,13.768)
OP2: (-5.102,-22.977,13.419)
C3': (-5.078,-28.154,13.190)
C1': (-3.323,-27.908,11.649)
C5': (-6.487,-26.294,12.120)
O4': (-4.428,-27.151,11.187)
C8: (-2.514,-25.793,12.794)
O2': (-4.228,-30.100,11.946)
C6: (0.925,-26.230,13.334)
C5: (-0.454,-26.200,13.052)
C4: (-0.984,-27.310,12.424)
P: (-6.149,-23.747,12.711)
C4': (-5.623,-27.521,11.919)
C2': (-3.880,-28.920,12.643)
C2: (0.969,-28.340,12.366)
N1: (1.616,-27.334,12.972)
N3: (-0.322,-28.419,12.052)
N6: (1.566,-25.225,13.940)
N7: (-1.427,-25.248,13.283)
N9: (-2.320,-27.034,12.258)
O5': (-5.726,-25.286,12.780)
O3': (-6.045,-29.004,13.768)
Image (generated by PyMOL):