Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.575 95.422 66.422 1.00106.46 O
ATOM 2 P A A1239 10.970 95.495 66.394 1.00105.57 P
ATOM 3 OP1 A A1239 10.545 96.502 67.397 1.00106.14 O
ATOM 4 OP2 A A1239 10.455 94.103 66.492 1.00105.63 O
ATOM 5 O5' A A1239 10.626 96.071 64.948 1.00103.27 O
ATOM 6 C5' A A1239 10.660 97.489 64.679 1.00 99.22 C
ATOM 7 C4' A A1239 9.267 97.994 64.375 1.00 96.57 C
ATOM 8 O4' A A1239 8.707 97.205 63.290 1.00 96.13 O
ATOM 9 C3' A A1239 8.262 97.843 65.507 1.00 95.35 C
ATOM 10 O3' A A1239 8.325 98.941 66.408 1.00 94.72 O
ATOM 11 C2' A A1239 6.934 97.783 64.762 1.00 95.09 C
ATOM 12 O2' A A1239 6.453 99.053 64.362 1.00 94.56 O
ATOM 13 C1' A A1239 7.325 96.970 63.526 1.00 93.80 C
ATOM 14 N9 A A1239 7.130 95.528 63.696 1.00 90.84 N
ATOM 15 C8 A A1239 8.095 94.567 63.884 1.00 89.61 C
ATOM 16 N7 A A1239 7.618 93.354 63.999 1.00 88.58 N
ATOM 17 C5 A A1239 6.246 93.523 63.882 1.00 87.83 C
ATOM 18 C6 A A1239 5.179 92.613 63.920 1.00 86.46 C
ATOM 19 N6 A A1239 5.334 91.299 64.090 1.00 85.90 N
ATOM 20 N1 A A1239 3.930 93.104 63.775 1.00 85.92 N
ATOM 21 C2 A A1239 3.778 94.421 63.603 1.00 86.81 C
ATOM 22 N3 A A1239 4.702 95.377 63.548 1.00 87.93 N
ATOM 23 C4 A A1239 5.931 94.856 63.697 1.00 88.88 C
ATOM 24 P C A1240 7.665 98.817 67.871 1.00 94.79 P
ATOM 25 OP1 C A1240 7.597 100.186 68.439 1.00 94.97 O
ATOM 26 OP2 C A1240 8.356 97.738 68.627 1.00 94.45 O
ATOM 27 O5' C A1240 6.171 98.343 67.597 1.00 91.98 O
TER
ATOM 1 O3' C B1236 10.390 87.488 58.887 1.00 64.58 O
ATOM 2 P A B1237 10.382 87.519 60.485 1.00 65.64 P
ATOM 3 OP1 A B1237 11.553 86.739 60.945 1.00 66.13 O
ATOM 4 OP2 A B1237 9.021 87.155 60.953 1.00 66.13 O
ATOM 5 O5' A B1237 10.617 89.052 60.832 1.00 69.48 O
ATOM 6 C5' A B1237 11.899 89.672 60.627 1.00 74.97 C
ATOM 7 C4' A B1237 11.838 91.117 61.041 1.00 78.44 C
ATOM 8 O4' A B1237 10.911 91.813 60.174 1.00 78.37 O
ATOM 9 C3' A B1237 11.293 91.347 62.440 1.00 81.71 C
ATOM 10 O3' A B1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 11 C2' A B1237 10.746 92.763 62.352 1.00 80.79 C
ATOM 12 O2' A B1237 11.738 93.759 62.497 1.00 80.49 O
ATOM 13 C1' A B1237 10.201 92.783 60.921 1.00 79.78 C
ATOM 14 N9 A B1237 8.775 92.475 60.832 1.00 79.31 N
ATOM 15 C8 A B1237 8.163 91.245 60.853 1.00 78.40 C
ATOM 16 N7 A B1237 6.859 91.305 60.759 1.00 78.00 N
ATOM 17 C5 A B1237 6.592 92.663 60.670 1.00 79.05 C
ATOM 18 C6 A B1237 5.391 93.389 60.555 1.00 80.02 C
ATOM 19 N6 A B1237 4.182 92.823 60.513 1.00 79.99 N
ATOM 20 N1 A B1237 5.476 94.735 60.485 1.00 80.75 N
ATOM 21 C2 A B1237 6.687 95.304 60.535 1.00 80.75 C
ATOM 22 N3 A B1237 7.883 94.731 60.648 1.00 80.06 N
ATOM 23 C4 A B1237 7.763 93.394 60.710 1.00 79.28 C
ATOM 24 P U B1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 25 OP1 U B1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 26 OP2 U B1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 27 O5' U B1238 13.185 91.107 65.764 1.00 98.55 O
TER
ATOM 2 P A A1239 10.970 95.495 66.394 1.00105.57 P
ATOM 3 OP1 A A1239 10.545 96.502 67.397 1.00106.14 O
ATOM 4 OP2 A A1239 10.455 94.103 66.492 1.00105.63 O
ATOM 5 O5' A A1239 10.626 96.071 64.948 1.00103.27 O
ATOM 6 C5' A A1239 10.660 97.489 64.679 1.00 99.22 C
ATOM 7 C4' A A1239 9.267 97.994 64.375 1.00 96.57 C
ATOM 8 O4' A A1239 8.707 97.205 63.290 1.00 96.13 O
ATOM 9 C3' A A1239 8.262 97.843 65.507 1.00 95.35 C
ATOM 10 O3' A A1239 8.325 98.941 66.408 1.00 94.72 O
ATOM 11 C2' A A1239 6.934 97.783 64.762 1.00 95.09 C
ATOM 12 O2' A A1239 6.453 99.053 64.362 1.00 94.56 O
ATOM 13 C1' A A1239 7.325 96.970 63.526 1.00 93.80 C
ATOM 14 N9 A A1239 7.130 95.528 63.696 1.00 90.84 N
ATOM 15 C8 A A1239 8.095 94.567 63.884 1.00 89.61 C
ATOM 16 N7 A A1239 7.618 93.354 63.999 1.00 88.58 N
ATOM 17 C5 A A1239 6.246 93.523 63.882 1.00 87.83 C
ATOM 18 C6 A A1239 5.179 92.613 63.920 1.00 86.46 C
ATOM 19 N6 A A1239 5.334 91.299 64.090 1.00 85.90 N
ATOM 20 N1 A A1239 3.930 93.104 63.775 1.00 85.92 N
ATOM 21 C2 A A1239 3.778 94.421 63.603 1.00 86.81 C
ATOM 22 N3 A A1239 4.702 95.377 63.548 1.00 87.93 N
ATOM 23 C4 A A1239 5.931 94.856 63.697 1.00 88.88 C
ATOM 24 P C A1240 7.665 98.817 67.871 1.00 94.79 P
ATOM 25 OP1 C A1240 7.597 100.186 68.439 1.00 94.97 O
ATOM 26 OP2 C A1240 8.356 97.738 68.627 1.00 94.45 O
ATOM 27 O5' C A1240 6.171 98.343 67.597 1.00 91.98 O
TER
ATOM 1 O3' C B1236 10.390 87.488 58.887 1.00 64.58 O
ATOM 2 P A B1237 10.382 87.519 60.485 1.00 65.64 P
ATOM 3 OP1 A B1237 11.553 86.739 60.945 1.00 66.13 O
ATOM 4 OP2 A B1237 9.021 87.155 60.953 1.00 66.13 O
ATOM 5 O5' A B1237 10.617 89.052 60.832 1.00 69.48 O
ATOM 6 C5' A B1237 11.899 89.672 60.627 1.00 74.97 C
ATOM 7 C4' A B1237 11.838 91.117 61.041 1.00 78.44 C
ATOM 8 O4' A B1237 10.911 91.813 60.174 1.00 78.37 O
ATOM 9 C3' A B1237 11.293 91.347 62.440 1.00 81.71 C
ATOM 10 O3' A B1237 12.322 91.217 63.412 1.00 88.65 O
ATOM 11 C2' A B1237 10.746 92.763 62.352 1.00 80.79 C
ATOM 12 O2' A B1237 11.738 93.759 62.497 1.00 80.49 O
ATOM 13 C1' A B1237 10.201 92.783 60.921 1.00 79.78 C
ATOM 14 N9 A B1237 8.775 92.475 60.832 1.00 79.31 N
ATOM 15 C8 A B1237 8.163 91.245 60.853 1.00 78.40 C
ATOM 16 N7 A B1237 6.859 91.305 60.759 1.00 78.00 N
ATOM 17 C5 A B1237 6.592 92.663 60.670 1.00 79.05 C
ATOM 18 C6 A B1237 5.391 93.389 60.555 1.00 80.02 C
ATOM 19 N6 A B1237 4.182 92.823 60.513 1.00 79.99 N
ATOM 20 N1 A B1237 5.476 94.735 60.485 1.00 80.75 N
ATOM 21 C2 A B1237 6.687 95.304 60.535 1.00 80.75 C
ATOM 22 N3 A B1237 7.883 94.731 60.648 1.00 80.06 N
ATOM 23 C4 A B1237 7.763 93.394 60.710 1.00 79.28 C
ATOM 24 P U B1238 12.003 90.549 64.842 1.00 94.84 P
ATOM 25 OP1 U B1238 12.193 89.076 64.702 1.00 92.44 O
ATOM 26 OP2 U B1238 10.700 91.081 65.342 1.00 93.50 O
ATOM 27 O5' U B1238 13.185 91.107 65.764 1.00 98.55 O
TER
Atoms:
OP1: (10.545,96.502,67.397)
OP2: (10.455,94.103,66.492)
C3': (8.262,97.843,65.507)
C1': (7.325,96.970,63.526)
C5': (10.660,97.489,64.679)
O4': (8.707,97.205,63.290)
C8: (8.095,94.567,63.884)
O2': (6.453,99.053,64.362)
C6: (5.179,92.613,63.920)
C5: (6.246,93.523,63.882)
C4: (5.931,94.856,63.697)
P: (10.970,95.495,66.394)
C4': (9.267,97.994,64.375)
C2': (6.934,97.783,64.762)
C2: (3.778,94.421,63.603)
N1: (3.930,93.104,63.775)
N3: (4.702,95.377,63.548)
N6: (5.334,91.299,64.090)
N7: (7.618,93.354,63.999)
N9: (7.130,95.528,63.696)
O5': (10.626,96.071,64.948)
O3': (8.325,98.941,66.408)
OP2: (10.455,94.103,66.492)
C3': (8.262,97.843,65.507)
C1': (7.325,96.970,63.526)
C5': (10.660,97.489,64.679)
O4': (8.707,97.205,63.290)
C8: (8.095,94.567,63.884)
O2': (6.453,99.053,64.362)
C6: (5.179,92.613,63.920)
C5: (6.246,93.523,63.882)
C4: (5.931,94.856,63.697)
P: (10.970,95.495,66.394)
C4': (9.267,97.994,64.375)
C2': (6.934,97.783,64.762)
C2: (3.778,94.421,63.603)
N1: (3.930,93.104,63.775)
N3: (4.702,95.377,63.548)
N6: (5.334,91.299,64.090)
N7: (7.618,93.354,63.999)
N9: (7.130,95.528,63.696)
O5': (10.626,96.071,64.948)
O3': (8.325,98.941,66.408)
OP1: (11.553,86.739,60.945)
OP2: (9.021,87.155,60.953)
C3': (11.293,91.347,62.440)
C1': (10.201,92.783,60.921)
C5': (11.899,89.672,60.627)
O4': (10.911,91.813,60.174)
C8: (8.163,91.245,60.853)
O2': (11.738,93.759,62.497)
C6: (5.391,93.389,60.555)
C5: (6.592,92.663,60.670)
C4: (7.763,93.394,60.710)
P: (10.382,87.519,60.485)
C4': (11.838,91.117,61.041)
C2': (10.746,92.763,62.352)
C2: (6.687,95.304,60.535)
N1: (5.476,94.735,60.485)
N3: (7.883,94.731,60.648)
N6: (4.182,92.823,60.513)
N7: (6.859,91.305,60.759)
N9: (8.775,92.475,60.832)
O5': (10.617,89.052,60.832)
O3': (12.322,91.217,63.412)
OP2: (9.021,87.155,60.953)
C3': (11.293,91.347,62.440)
C1': (10.201,92.783,60.921)
C5': (11.899,89.672,60.627)
O4': (10.911,91.813,60.174)
C8: (8.163,91.245,60.853)
O2': (11.738,93.759,62.497)
C6: (5.391,93.389,60.555)
C5: (6.592,92.663,60.670)
C4: (7.763,93.394,60.710)
P: (10.382,87.519,60.485)
C4': (11.838,91.117,61.041)
C2': (10.746,92.763,62.352)
C2: (6.687,95.304,60.535)
N1: (5.476,94.735,60.485)
N3: (7.883,94.731,60.648)
N6: (4.182,92.823,60.513)
N7: (6.859,91.305,60.759)
N9: (8.775,92.475,60.832)
O5': (10.617,89.052,60.832)
O3': (12.322,91.217,63.412)
Image (generated by PyMOL):