Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A1040:A1041
Extra
PDB:
ATOM 1 O3' U A1039 -124.936 44.097 -6.943 1.00 38.60 O
ATOM 2 P C A1040 -124.463 45.388 -6.122 1.00 66.21 P
ATOM 3 OP1 C A1040 -124.681 45.105 -4.683 1.00100.05 O
ATOM 4 OP2 C A1040 -125.102 46.576 -6.743 1.00103.12 O
ATOM 5 O5' C A1040 -122.898 45.461 -6.401 1.00 27.67 O
ATOM 6 C5' C A1040 -122.014 44.489 -5.825 1.00 25.41 C
ATOM 7 C4' C A1040 -120.609 44.696 -6.329 1.00 21.63 C
ATOM 8 O4' C A1040 -120.623 44.567 -7.770 1.00 21.41 O
ATOM 9 C3' C A1040 -119.990 46.060 -6.047 1.00 19.67 C
ATOM 10 O3' C A1040 -119.358 46.066 -4.759 1.00 11.87 O
ATOM 11 C2' C A1040 -119.005 46.229 -7.203 1.00 21.42 C
ATOM 12 O2' C A1040 -117.750 45.621 -6.989 1.00 22.43 O
ATOM 13 C1' C A1040 -119.726 45.497 -8.339 1.00 24.12 C
ATOM 14 N1 C A1040 -120.502 46.384 -9.222 1.00 70.03 N
ATOM 15 C2 C A1040 -119.977 46.710 -10.477 1.00 73.71 C
ATOM 16 O2 C A1040 -118.865 46.258 -10.802 1.00 76.78 O
ATOM 17 N3 C A1040 -120.690 47.508 -11.304 1.00 74.63 N
ATOM 18 C4 C A1040 -121.874 47.980 -10.917 1.00 74.09 C
ATOM 19 N4 C A1040 -122.538 48.760 -11.771 1.00 74.03 N
ATOM 20 C5 C A1040 -122.428 47.672 -9.639 1.00 74.43 C
ATOM 21 C6 C A1040 -121.717 46.880 -8.832 1.00 73.32 C
ATOM 22 P G A1041 -118.827 47.450 -4.116 1.00101.87 P
ATOM 23 OP1 G A1041 -117.658 47.916 -4.921 1.00 65.74 O
ATOM 24 OP2 G A1041 -118.662 47.221 -2.657 1.00 65.74 O
ATOM 25 O5' G A1041 -120.034 48.475 -4.330 1.00 61.96 O
TER
ATOM 1 O3' C B1040 -119.358 46.066 -4.759 1.00 11.87 O
ATOM 2 P G B1041 -118.827 47.450 -4.116 1.00101.87 P
ATOM 3 OP1 G B1041 -117.658 47.916 -4.921 1.00 65.74 O
ATOM 4 OP2 G B1041 -118.662 47.221 -2.657 1.00 65.74 O
ATOM 5 O5' G B1041 -120.034 48.475 -4.330 1.00 61.96 O
ATOM 6 C5' G B1041 -120.317 49.514 -3.362 1.00 61.96 C
ATOM 7 C4' G B1041 -121.664 50.151 -3.647 1.00 61.96 C
ATOM 8 O4' G B1041 -121.553 51.011 -4.809 1.00 61.96 O
ATOM 9 C3' G B1041 -122.802 49.184 -3.933 1.00 61.96 C
ATOM 10 O3' G B1041 -123.944 49.451 -3.058 1.00 61.96 O
ATOM 11 C2' G B1041 -122.846 49.138 -5.466 1.00 61.96 C
ATOM 12 O2' G B1041 -124.038 48.752 -6.103 1.00 61.96 O
ATOM 13 C1' G B1041 -122.346 50.521 -5.872 1.00 61.96 C
ATOM 14 N9 G B1041 -121.476 50.469 -7.043 1.00 65.49 N
ATOM 15 C8 G B1041 -120.184 50.006 -7.073 1.00 65.49 C
ATOM 16 N7 G B1041 -119.625 50.112 -8.247 1.00 65.49 N
ATOM 17 C5 G B1041 -120.608 50.673 -9.048 1.00 65.49 C
ATOM 18 C6 G B1041 -120.581 51.028 -10.427 1.00 65.49 C
ATOM 19 O6 G B1041 -119.652 50.915 -11.239 1.00 65.49 O
ATOM 20 N1 G B1041 -121.795 51.559 -10.837 1.00 65.49 N
ATOM 21 C2 G B1041 -122.896 51.726 -10.033 1.00 65.49 C
ATOM 22 N2 G B1041 -123.979 52.232 -10.623 1.00 65.49 N
ATOM 23 N3 G B1041 -122.933 51.411 -8.748 1.00 65.49 N
ATOM 24 C4 G B1041 -121.763 50.892 -8.323 1.00 65.49 C
ATOM 25 P U B1042 -125.215 50.333 -3.530 1.00 58.77 P
ATOM 26 OP1 U B1042 -126.285 50.105 -2.524 1.00 79.95 O
ATOM 27 OP2 U B1042 -125.513 50.094 -4.953 1.00 78.54 O
ATOM 28 O5' U B1042 -124.740 51.838 -3.323 1.00 80.35 O
TER
ATOM 2 P C A1040 -124.463 45.388 -6.122 1.00 66.21 P
ATOM 3 OP1 C A1040 -124.681 45.105 -4.683 1.00100.05 O
ATOM 4 OP2 C A1040 -125.102 46.576 -6.743 1.00103.12 O
ATOM 5 O5' C A1040 -122.898 45.461 -6.401 1.00 27.67 O
ATOM 6 C5' C A1040 -122.014 44.489 -5.825 1.00 25.41 C
ATOM 7 C4' C A1040 -120.609 44.696 -6.329 1.00 21.63 C
ATOM 8 O4' C A1040 -120.623 44.567 -7.770 1.00 21.41 O
ATOM 9 C3' C A1040 -119.990 46.060 -6.047 1.00 19.67 C
ATOM 10 O3' C A1040 -119.358 46.066 -4.759 1.00 11.87 O
ATOM 11 C2' C A1040 -119.005 46.229 -7.203 1.00 21.42 C
ATOM 12 O2' C A1040 -117.750 45.621 -6.989 1.00 22.43 O
ATOM 13 C1' C A1040 -119.726 45.497 -8.339 1.00 24.12 C
ATOM 14 N1 C A1040 -120.502 46.384 -9.222 1.00 70.03 N
ATOM 15 C2 C A1040 -119.977 46.710 -10.477 1.00 73.71 C
ATOM 16 O2 C A1040 -118.865 46.258 -10.802 1.00 76.78 O
ATOM 17 N3 C A1040 -120.690 47.508 -11.304 1.00 74.63 N
ATOM 18 C4 C A1040 -121.874 47.980 -10.917 1.00 74.09 C
ATOM 19 N4 C A1040 -122.538 48.760 -11.771 1.00 74.03 N
ATOM 20 C5 C A1040 -122.428 47.672 -9.639 1.00 74.43 C
ATOM 21 C6 C A1040 -121.717 46.880 -8.832 1.00 73.32 C
ATOM 22 P G A1041 -118.827 47.450 -4.116 1.00101.87 P
ATOM 23 OP1 G A1041 -117.658 47.916 -4.921 1.00 65.74 O
ATOM 24 OP2 G A1041 -118.662 47.221 -2.657 1.00 65.74 O
ATOM 25 O5' G A1041 -120.034 48.475 -4.330 1.00 61.96 O
TER
ATOM 1 O3' C B1040 -119.358 46.066 -4.759 1.00 11.87 O
ATOM 2 P G B1041 -118.827 47.450 -4.116 1.00101.87 P
ATOM 3 OP1 G B1041 -117.658 47.916 -4.921 1.00 65.74 O
ATOM 4 OP2 G B1041 -118.662 47.221 -2.657 1.00 65.74 O
ATOM 5 O5' G B1041 -120.034 48.475 -4.330 1.00 61.96 O
ATOM 6 C5' G B1041 -120.317 49.514 -3.362 1.00 61.96 C
ATOM 7 C4' G B1041 -121.664 50.151 -3.647 1.00 61.96 C
ATOM 8 O4' G B1041 -121.553 51.011 -4.809 1.00 61.96 O
ATOM 9 C3' G B1041 -122.802 49.184 -3.933 1.00 61.96 C
ATOM 10 O3' G B1041 -123.944 49.451 -3.058 1.00 61.96 O
ATOM 11 C2' G B1041 -122.846 49.138 -5.466 1.00 61.96 C
ATOM 12 O2' G B1041 -124.038 48.752 -6.103 1.00 61.96 O
ATOM 13 C1' G B1041 -122.346 50.521 -5.872 1.00 61.96 C
ATOM 14 N9 G B1041 -121.476 50.469 -7.043 1.00 65.49 N
ATOM 15 C8 G B1041 -120.184 50.006 -7.073 1.00 65.49 C
ATOM 16 N7 G B1041 -119.625 50.112 -8.247 1.00 65.49 N
ATOM 17 C5 G B1041 -120.608 50.673 -9.048 1.00 65.49 C
ATOM 18 C6 G B1041 -120.581 51.028 -10.427 1.00 65.49 C
ATOM 19 O6 G B1041 -119.652 50.915 -11.239 1.00 65.49 O
ATOM 20 N1 G B1041 -121.795 51.559 -10.837 1.00 65.49 N
ATOM 21 C2 G B1041 -122.896 51.726 -10.033 1.00 65.49 C
ATOM 22 N2 G B1041 -123.979 52.232 -10.623 1.00 65.49 N
ATOM 23 N3 G B1041 -122.933 51.411 -8.748 1.00 65.49 N
ATOM 24 C4 G B1041 -121.763 50.892 -8.323 1.00 65.49 C
ATOM 25 P U B1042 -125.215 50.333 -3.530 1.00 58.77 P
ATOM 26 OP1 U B1042 -126.285 50.105 -2.524 1.00 79.95 O
ATOM 27 OP2 U B1042 -125.513 50.094 -4.953 1.00 78.54 O
ATOM 28 O5' U B1042 -124.740 51.838 -3.323 1.00 80.35 O
TER
Atoms:
C2: (-119.977,46.710,-10.477)
OP1: (-124.681,45.105,-4.683)
OP2: (-125.102,46.576,-6.743)
C4: (-121.874,47.980,-10.917)
O5': (-122.898,45.461,-6.401)
C3': (-119.990,46.060,-6.047)
C1': (-119.726,45.497,-8.339)
O4': (-120.623,44.567,-7.770)
C5': (-122.014,44.489,-5.825)
P: (-124.463,45.388,-6.122)
O2: (-118.865,46.258,-10.802)
C4': (-120.609,44.696,-6.329)
C2': (-119.005,46.229,-7.203)
O2': (-117.750,45.621,-6.989)
N1: (-120.502,46.384,-9.222)
N3: (-120.690,47.508,-11.304)
N4: (-122.538,48.760,-11.771)
C6: (-121.717,46.880,-8.832)
C5: (-122.428,47.672,-9.639)
O3': (-119.358,46.066,-4.759)
OP1: (-124.681,45.105,-4.683)
OP2: (-125.102,46.576,-6.743)
C4: (-121.874,47.980,-10.917)
O5': (-122.898,45.461,-6.401)
C3': (-119.990,46.060,-6.047)
C1': (-119.726,45.497,-8.339)
O4': (-120.623,44.567,-7.770)
C5': (-122.014,44.489,-5.825)
P: (-124.463,45.388,-6.122)
O2: (-118.865,46.258,-10.802)
C4': (-120.609,44.696,-6.329)
C2': (-119.005,46.229,-7.203)
O2': (-117.750,45.621,-6.989)
N1: (-120.502,46.384,-9.222)
N3: (-120.690,47.508,-11.304)
N4: (-122.538,48.760,-11.771)
C6: (-121.717,46.880,-8.832)
C5: (-122.428,47.672,-9.639)
O3': (-119.358,46.066,-4.759)
OP1: (-117.658,47.916,-4.921)
OP2: (-118.662,47.221,-2.657)
C3': (-122.802,49.184,-3.933)
C1': (-122.346,50.521,-5.872)
C5': (-120.317,49.514,-3.362)
O6: (-119.652,50.915,-11.239)
O4': (-121.553,51.011,-4.809)
C8: (-120.184,50.006,-7.073)
C2: (-122.896,51.726,-10.033)
C6: (-120.581,51.028,-10.427)
C5: (-120.608,50.673,-9.048)
C4: (-121.763,50.892,-8.323)
P: (-118.827,47.450,-4.116)
C4': (-121.664,50.151,-3.647)
C2': (-122.846,49.138,-5.466)
O2': (-124.038,48.752,-6.103)
N1: (-121.795,51.559,-10.837)
N2: (-123.979,52.232,-10.623)
N3: (-122.933,51.411,-8.748)
N7: (-119.625,50.112,-8.247)
N9: (-121.476,50.469,-7.043)
O5': (-120.034,48.475,-4.330)
O3': (-123.944,49.451,-3.058)
OP2: (-118.662,47.221,-2.657)
C3': (-122.802,49.184,-3.933)
C1': (-122.346,50.521,-5.872)
C5': (-120.317,49.514,-3.362)
O6: (-119.652,50.915,-11.239)
O4': (-121.553,51.011,-4.809)
C8: (-120.184,50.006,-7.073)
C2: (-122.896,51.726,-10.033)
C6: (-120.581,51.028,-10.427)
C5: (-120.608,50.673,-9.048)
C4: (-121.763,50.892,-8.323)
P: (-118.827,47.450,-4.116)
C4': (-121.664,50.151,-3.647)
C2': (-122.846,49.138,-5.466)
O2': (-124.038,48.752,-6.103)
N1: (-121.795,51.559,-10.837)
N2: (-123.979,52.232,-10.623)
N3: (-122.933,51.411,-8.748)
N7: (-119.625,50.112,-8.247)
N9: (-121.476,50.469,-7.043)
O5': (-120.034,48.475,-4.330)
O3': (-123.944,49.451,-3.058)
Image (generated by PyMOL):