Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1061:A1062
Extra
PDB:
ATOM 1 O3' U A1060 -121.165 38.996 -7.238 1.00 12.04 O
ATOM 2 P C A1061 -121.741 39.946 -6.084 1.00 17.34 P
ATOM 3 OP1 C A1061 -122.605 39.112 -5.219 1.00 17.34 O
ATOM 4 OP2 C A1061 -122.331 41.142 -6.734 1.00 17.34 O
ATOM 5 O5' C A1061 -120.428 40.344 -5.298 1.00 17.34 O
ATOM 6 C5' C A1061 -119.398 39.395 -5.112 1.00 17.34 C
ATOM 7 C4' C A1061 -118.264 39.616 -6.072 1.00 17.34 C
ATOM 8 O4' C A1061 -118.703 39.401 -7.431 1.00 17.34 O
ATOM 9 C3' C A1061 -117.695 41.012 -6.117 1.00 17.34 C
ATOM 10 O3' C A1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 11 C2' C A1061 -116.951 41.016 -7.438 1.00 17.34 C
ATOM 12 O2' C A1061 -115.701 40.354 -7.312 1.00 17.34 O
ATOM 13 C1' C A1061 -117.879 40.159 -8.302 1.00 17.34 C
ATOM 14 N1 C A1061 -118.732 40.971 -9.201 1.00 17.29 N
ATOM 15 C2 C A1061 -118.216 41.221 -10.451 1.00 17.29 C
ATOM 16 O2 C A1061 -117.105 40.754 -10.638 1.00 17.29 O
ATOM 17 N3 C A1061 -118.886 41.926 -11.384 1.00 17.29 N
ATOM 18 C4 C A1061 -120.095 42.395 -11.087 1.00 17.29 C
ATOM 19 N4 C A1061 -120.781 43.094 -12.005 1.00 17.29 N
ATOM 20 C5 C A1061 -120.664 42.158 -9.797 1.00 17.29 C
ATOM 21 C6 C A1061 -119.964 41.444 -8.892 1.00 17.29 C
ATOM 22 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 23 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 24 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 25 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
TER
ATOM 1 O3' C B1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 2 P G B1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G B1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G B1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G B1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G B1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G B1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G B1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G B1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G B1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G B1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G B1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G B1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G B1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G B1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G B1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G B1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G B1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G B1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G B1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G B1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G B1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G B1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G B1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U B1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U B1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U B1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U B1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
ATOM 2 P C A1061 -121.741 39.946 -6.084 1.00 17.34 P
ATOM 3 OP1 C A1061 -122.605 39.112 -5.219 1.00 17.34 O
ATOM 4 OP2 C A1061 -122.331 41.142 -6.734 1.00 17.34 O
ATOM 5 O5' C A1061 -120.428 40.344 -5.298 1.00 17.34 O
ATOM 6 C5' C A1061 -119.398 39.395 -5.112 1.00 17.34 C
ATOM 7 C4' C A1061 -118.264 39.616 -6.072 1.00 17.34 C
ATOM 8 O4' C A1061 -118.703 39.401 -7.431 1.00 17.34 O
ATOM 9 C3' C A1061 -117.695 41.012 -6.117 1.00 17.34 C
ATOM 10 O3' C A1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 11 C2' C A1061 -116.951 41.016 -7.438 1.00 17.34 C
ATOM 12 O2' C A1061 -115.701 40.354 -7.312 1.00 17.34 O
ATOM 13 C1' C A1061 -117.879 40.159 -8.302 1.00 17.34 C
ATOM 14 N1 C A1061 -118.732 40.971 -9.201 1.00 17.29 N
ATOM 15 C2 C A1061 -118.216 41.221 -10.451 1.00 17.29 C
ATOM 16 O2 C A1061 -117.105 40.754 -10.638 1.00 17.29 O
ATOM 17 N3 C A1061 -118.886 41.926 -11.384 1.00 17.29 N
ATOM 18 C4 C A1061 -120.095 42.395 -11.087 1.00 17.29 C
ATOM 19 N4 C A1061 -120.781 43.094 -12.005 1.00 17.29 N
ATOM 20 C5 C A1061 -120.664 42.158 -9.797 1.00 17.29 C
ATOM 21 C6 C A1061 -119.964 41.444 -8.892 1.00 17.29 C
ATOM 22 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 23 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 24 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 25 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
TER
ATOM 1 O3' C B1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 2 P G B1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G B1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G B1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G B1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G B1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G B1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G B1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G B1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G B1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G B1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G B1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G B1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G B1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G B1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G B1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G B1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G B1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G B1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G B1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G B1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G B1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G B1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G B1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U B1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U B1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U B1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U B1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
Atoms:
C2: (-118.216,41.221,-10.451)
OP1: (-122.605,39.112,-5.219)
OP2: (-122.331,41.142,-6.734)
C4: (-120.095,42.395,-11.087)
O5': (-120.428,40.344,-5.298)
C3': (-117.695,41.012,-6.117)
C1': (-117.879,40.159,-8.302)
O4': (-118.703,39.401,-7.431)
C5': (-119.398,39.395,-5.112)
P: (-121.741,39.946,-6.084)
O2: (-117.105,40.754,-10.638)
C4': (-118.264,39.616,-6.072)
C2': (-116.951,41.016,-7.438)
O2': (-115.701,40.354,-7.312)
N1: (-118.732,40.971,-9.201)
N3: (-118.886,41.926,-11.384)
N4: (-120.781,43.094,-12.005)
C6: (-119.964,41.444,-8.892)
C5: (-120.664,42.158,-9.797)
O3': (-116.884,41.306,-5.015)
OP1: (-122.605,39.112,-5.219)
OP2: (-122.331,41.142,-6.734)
C4: (-120.095,42.395,-11.087)
O5': (-120.428,40.344,-5.298)
C3': (-117.695,41.012,-6.117)
C1': (-117.879,40.159,-8.302)
O4': (-118.703,39.401,-7.431)
C5': (-119.398,39.395,-5.112)
P: (-121.741,39.946,-6.084)
O2: (-117.105,40.754,-10.638)
C4': (-118.264,39.616,-6.072)
C2': (-116.951,41.016,-7.438)
O2': (-115.701,40.354,-7.312)
N1: (-118.732,40.971,-9.201)
N3: (-118.886,41.926,-11.384)
N4: (-120.781,43.094,-12.005)
C6: (-119.964,41.444,-8.892)
C5: (-120.664,42.158,-9.797)
O3': (-116.884,41.306,-5.015)
OP1: (-116.095,43.575,-5.697)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
Image (generated by PyMOL):