Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A1040:A1041
Extra
PDB:
ATOM 1 O3' U A1039 125.008 44.086 8.133 1.00121.00 O
ATOM 2 P C A1040 125.109 45.209 6.986 1.00125.20 P
ATOM 3 OP1 C A1040 125.660 44.551 5.776 1.00144.68 O
ATOM 4 OP2 C A1040 125.835 46.361 7.566 1.00145.96 O
ATOM 5 O5' C A1040 123.593 45.595 6.735 1.00115.48 O
ATOM 6 C5' C A1040 122.647 44.604 6.375 1.00115.34 C
ATOM 7 C4' C A1040 121.332 44.817 7.083 1.00119.76 C
ATOM 8 O4' C A1040 121.487 44.594 8.508 1.00120.17 O
ATOM 9 C3' C A1040 120.743 46.213 6.980 1.00114.17 C
ATOM 10 O3' C A1040 120.068 46.416 5.750 1.00112.09 O
ATOM 11 C2' C A1040 119.839 46.298 8.212 1.00118.35 C
ATOM 12 O2' C A1040 118.571 45.718 7.949 1.00115.69 O
ATOM 13 C1' C A1040 120.579 45.405 9.221 1.00122.16 C
ATOM 14 N1 C A1040 121.325 46.188 10.247 1.00149.18 N
ATOM 15 C2 C A1040 120.836 46.197 11.563 1.00155.25 C
ATOM 16 O2 C A1040 119.799 45.569 11.819 1.00160.98 O
ATOM 17 N3 C A1040 121.488 46.887 12.528 1.00156.14 N
ATOM 18 C4 C A1040 122.599 47.555 12.228 1.00155.68 C
ATOM 19 N4 C A1040 123.208 48.221 13.211 1.00159.14 N
ATOM 20 C5 C A1040 123.130 47.563 10.904 1.00152.16 C
ATOM 21 C6 C A1040 122.474 46.873 9.958 1.00149.12 C
ATOM 22 P G A1041 119.289 47.786 5.451 1.00159.35 P
ATOM 23 OP1 G A1041 118.124 47.844 6.374 1.00152.90 O
ATOM 24 OP2 G A1041 119.044 47.831 3.987 1.00149.61 O
ATOM 25 O5' G A1041 120.353 48.893 5.854 1.00137.36 O
TER
ATOM 1 O3' C B1040 120.068 46.416 5.750 1.00112.09 O
ATOM 2 P G B1041 119.289 47.786 5.451 1.00159.35 P
ATOM 3 OP1 G B1041 118.124 47.844 6.374 1.00152.90 O
ATOM 4 OP2 G B1041 119.044 47.831 3.987 1.00149.61 O
ATOM 5 O5' G B1041 120.353 48.893 5.854 1.00137.36 O
ATOM 6 C5' G B1041 121.060 49.623 4.858 1.00140.15 C
ATOM 7 C4' G B1041 122.442 49.983 5.329 1.00142.09 C
ATOM 8 O4' G B1041 122.313 50.794 6.525 1.00137.59 O
ATOM 9 C3' G B1041 123.310 48.784 5.696 1.00141.05 C
ATOM 10 O3' G B1041 124.673 48.949 5.244 1.00143.34 O
ATOM 11 C2' G B1041 123.223 48.707 7.221 1.00137.30 C
ATOM 12 O2' G B1041 124.390 48.227 7.851 1.00135.49 O
ATOM 13 C1' G B1041 122.898 50.148 7.640 1.00138.83 C
ATOM 14 N9 G B1041 121.941 50.226 8.753 1.00142.99 N
ATOM 15 C8 G B1041 120.586 49.990 8.689 1.00142.33 C
ATOM 16 N7 G B1041 119.973 50.117 9.835 1.00138.07 N
ATOM 17 C5 G B1041 120.984 50.451 10.715 1.00139.07 C
ATOM 18 C6 G B1041 120.932 50.714 12.102 1.00139.84 C
ATOM 19 O6 G B1041 119.945 50.700 12.842 1.00143.07 O
ATOM 20 N1 G B1041 122.189 51.017 12.613 1.00142.31 N
ATOM 21 C2 G B1041 123.349 51.061 11.878 1.00143.69 C
ATOM 22 N2 G B1041 124.475 51.369 12.532 1.00146.84 N
ATOM 23 N3 G B1041 123.412 50.818 10.583 1.00146.58 N
ATOM 24 C4 G B1041 122.201 50.523 10.069 1.00146.21 C
ATOM 25 P U B1042 125.581 50.219 5.649 1.00151.48 P
ATOM 26 OP1 U B1042 126.890 50.038 4.976 1.00167.87 O
ATOM 27 OP2 U B1042 125.557 50.328 7.125 1.00167.30 O
ATOM 28 O5' U B1042 124.814 51.454 4.995 1.00138.06 O
TER
ATOM 2 P C A1040 125.109 45.209 6.986 1.00125.20 P
ATOM 3 OP1 C A1040 125.660 44.551 5.776 1.00144.68 O
ATOM 4 OP2 C A1040 125.835 46.361 7.566 1.00145.96 O
ATOM 5 O5' C A1040 123.593 45.595 6.735 1.00115.48 O
ATOM 6 C5' C A1040 122.647 44.604 6.375 1.00115.34 C
ATOM 7 C4' C A1040 121.332 44.817 7.083 1.00119.76 C
ATOM 8 O4' C A1040 121.487 44.594 8.508 1.00120.17 O
ATOM 9 C3' C A1040 120.743 46.213 6.980 1.00114.17 C
ATOM 10 O3' C A1040 120.068 46.416 5.750 1.00112.09 O
ATOM 11 C2' C A1040 119.839 46.298 8.212 1.00118.35 C
ATOM 12 O2' C A1040 118.571 45.718 7.949 1.00115.69 O
ATOM 13 C1' C A1040 120.579 45.405 9.221 1.00122.16 C
ATOM 14 N1 C A1040 121.325 46.188 10.247 1.00149.18 N
ATOM 15 C2 C A1040 120.836 46.197 11.563 1.00155.25 C
ATOM 16 O2 C A1040 119.799 45.569 11.819 1.00160.98 O
ATOM 17 N3 C A1040 121.488 46.887 12.528 1.00156.14 N
ATOM 18 C4 C A1040 122.599 47.555 12.228 1.00155.68 C
ATOM 19 N4 C A1040 123.208 48.221 13.211 1.00159.14 N
ATOM 20 C5 C A1040 123.130 47.563 10.904 1.00152.16 C
ATOM 21 C6 C A1040 122.474 46.873 9.958 1.00149.12 C
ATOM 22 P G A1041 119.289 47.786 5.451 1.00159.35 P
ATOM 23 OP1 G A1041 118.124 47.844 6.374 1.00152.90 O
ATOM 24 OP2 G A1041 119.044 47.831 3.987 1.00149.61 O
ATOM 25 O5' G A1041 120.353 48.893 5.854 1.00137.36 O
TER
ATOM 1 O3' C B1040 120.068 46.416 5.750 1.00112.09 O
ATOM 2 P G B1041 119.289 47.786 5.451 1.00159.35 P
ATOM 3 OP1 G B1041 118.124 47.844 6.374 1.00152.90 O
ATOM 4 OP2 G B1041 119.044 47.831 3.987 1.00149.61 O
ATOM 5 O5' G B1041 120.353 48.893 5.854 1.00137.36 O
ATOM 6 C5' G B1041 121.060 49.623 4.858 1.00140.15 C
ATOM 7 C4' G B1041 122.442 49.983 5.329 1.00142.09 C
ATOM 8 O4' G B1041 122.313 50.794 6.525 1.00137.59 O
ATOM 9 C3' G B1041 123.310 48.784 5.696 1.00141.05 C
ATOM 10 O3' G B1041 124.673 48.949 5.244 1.00143.34 O
ATOM 11 C2' G B1041 123.223 48.707 7.221 1.00137.30 C
ATOM 12 O2' G B1041 124.390 48.227 7.851 1.00135.49 O
ATOM 13 C1' G B1041 122.898 50.148 7.640 1.00138.83 C
ATOM 14 N9 G B1041 121.941 50.226 8.753 1.00142.99 N
ATOM 15 C8 G B1041 120.586 49.990 8.689 1.00142.33 C
ATOM 16 N7 G B1041 119.973 50.117 9.835 1.00138.07 N
ATOM 17 C5 G B1041 120.984 50.451 10.715 1.00139.07 C
ATOM 18 C6 G B1041 120.932 50.714 12.102 1.00139.84 C
ATOM 19 O6 G B1041 119.945 50.700 12.842 1.00143.07 O
ATOM 20 N1 G B1041 122.189 51.017 12.613 1.00142.31 N
ATOM 21 C2 G B1041 123.349 51.061 11.878 1.00143.69 C
ATOM 22 N2 G B1041 124.475 51.369 12.532 1.00146.84 N
ATOM 23 N3 G B1041 123.412 50.818 10.583 1.00146.58 N
ATOM 24 C4 G B1041 122.201 50.523 10.069 1.00146.21 C
ATOM 25 P U B1042 125.581 50.219 5.649 1.00151.48 P
ATOM 26 OP1 U B1042 126.890 50.038 4.976 1.00167.87 O
ATOM 27 OP2 U B1042 125.557 50.328 7.125 1.00167.30 O
ATOM 28 O5' U B1042 124.814 51.454 4.995 1.00138.06 O
TER
Atoms:
C2: (120.836,46.197,11.563)
OP1: (125.660,44.551,5.776)
OP2: (125.835,46.361,7.566)
C4: (122.599,47.555,12.228)
O5': (123.593,45.595,6.735)
C3': (120.743,46.213,6.980)
C1': (120.579,45.405,9.221)
O4': (121.487,44.594,8.508)
C5': (122.647,44.604,6.375)
P: (125.109,45.209,6.986)
O2: (119.799,45.569,11.819)
C4': (121.332,44.817,7.083)
C2': (119.839,46.298,8.212)
O2': (118.571,45.718,7.949)
N1: (121.325,46.188,10.247)
N3: (121.488,46.887,12.528)
N4: (123.208,48.221,13.211)
C6: (122.474,46.873,9.958)
C5: (123.130,47.563,10.904)
O3': (120.068,46.416,5.750)
OP1: (125.660,44.551,5.776)
OP2: (125.835,46.361,7.566)
C4: (122.599,47.555,12.228)
O5': (123.593,45.595,6.735)
C3': (120.743,46.213,6.980)
C1': (120.579,45.405,9.221)
O4': (121.487,44.594,8.508)
C5': (122.647,44.604,6.375)
P: (125.109,45.209,6.986)
O2: (119.799,45.569,11.819)
C4': (121.332,44.817,7.083)
C2': (119.839,46.298,8.212)
O2': (118.571,45.718,7.949)
N1: (121.325,46.188,10.247)
N3: (121.488,46.887,12.528)
N4: (123.208,48.221,13.211)
C6: (122.474,46.873,9.958)
C5: (123.130,47.563,10.904)
O3': (120.068,46.416,5.750)
OP1: (118.124,47.844,6.374)
OP2: (119.044,47.831,3.987)
C3': (123.310,48.784,5.696)
C1': (122.898,50.148,7.640)
C5': (121.060,49.623,4.858)
O6: (119.945,50.700,12.842)
O4': (122.313,50.794,6.525)
C8: (120.586,49.990,8.689)
C2: (123.349,51.061,11.878)
C6: (120.932,50.714,12.102)
C5: (120.984,50.451,10.715)
C4: (122.201,50.523,10.069)
P: (119.289,47.786,5.451)
C4': (122.442,49.983,5.329)
C2': (123.223,48.707,7.221)
O2': (124.390,48.227,7.851)
N1: (122.189,51.017,12.613)
N2: (124.475,51.369,12.532)
N3: (123.412,50.818,10.583)
N7: (119.973,50.117,9.835)
N9: (121.941,50.226,8.753)
O5': (120.353,48.893,5.854)
O3': (124.673,48.949,5.244)
OP2: (119.044,47.831,3.987)
C3': (123.310,48.784,5.696)
C1': (122.898,50.148,7.640)
C5': (121.060,49.623,4.858)
O6: (119.945,50.700,12.842)
O4': (122.313,50.794,6.525)
C8: (120.586,49.990,8.689)
C2: (123.349,51.061,11.878)
C6: (120.932,50.714,12.102)
C5: (120.984,50.451,10.715)
C4: (122.201,50.523,10.069)
P: (119.289,47.786,5.451)
C4': (122.442,49.983,5.329)
C2': (123.223,48.707,7.221)
O2': (124.390,48.227,7.851)
N1: (122.189,51.017,12.613)
N2: (124.475,51.369,12.532)
N3: (123.412,50.818,10.583)
N7: (119.973,50.117,9.835)
N9: (121.941,50.226,8.753)
O5': (120.353,48.893,5.854)
O3': (124.673,48.949,5.244)
Image (generated by PyMOL):