Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1223:A1222
Extra
PDB:
ATOM 1 O3' C A1222 7.928 89.089 98.130 1.00 33.52 O
ATOM 2 P U A1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 3 OP1 U A1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 4 OP2 U A1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 5 O5' U A1223 6.756 90.655 96.589 1.00 30.25 O
ATOM 6 C5' U A1223 5.447 90.639 97.142 1.00 31.59 C
ATOM 7 C4' U A1223 4.839 92.013 97.099 1.00 34.30 C
ATOM 8 O4' U A1223 5.603 92.898 97.942 1.00 33.96 O
ATOM 9 C3' U A1223 4.856 92.722 95.759 1.00 35.33 C
ATOM 10 O3' U A1223 3.823 92.276 94.893 1.00 37.88 O
ATOM 11 C2' U A1223 4.693 94.176 96.167 1.00 34.15 C
ATOM 12 O2' U A1223 3.377 94.512 96.535 1.00 33.11 O
ATOM 13 C1' U A1223 5.563 94.211 97.413 1.00 34.34 C
ATOM 14 N1 U A1223 6.926 94.632 97.079 1.00 36.12 N
ATOM 15 C2 U A1223 7.167 95.981 97.090 1.00 36.62 C
ATOM 16 O2 U A1223 6.311 96.799 97.369 1.00 35.76 O
ATOM 17 N3 U A1223 8.439 96.341 96.749 1.00 36.30 N
ATOM 18 C4 U A1223 9.466 95.509 96.384 1.00 36.38 C
ATOM 19 O4 U A1223 10.468 96.007 95.879 1.00 37.05 O
ATOM 20 C5 U A1223 9.146 94.115 96.416 1.00 36.41 C
ATOM 21 C6 U A1223 7.917 93.735 96.754 1.00 35.92 C
ATOM 22 P G A1224 3.951 92.524 93.316 1.00 39.54 P
ATOM 23 OP1 G A1224 3.002 91.568 92.705 1.00 39.18 O
ATOM 24 OP2 G A1224 5.378 92.482 92.927 1.00 39.71 O
ATOM 25 O5' G A1224 3.381 93.994 93.113 1.00 36.48 O
TER
ATOM 1 O3' C B1221 13.730 88.809 99.319 1.00 40.61 O
ATOM 2 P C B1222 12.917 88.993 97.959 1.00 40.63 P
ATOM 3 OP1 C B1222 12.876 87.677 97.298 1.00 40.76 O
ATOM 4 OP2 C B1222 13.433 90.171 97.222 1.00 40.95 O
ATOM 5 O5' C B1222 11.478 89.387 98.475 1.00 39.67 O
ATOM 6 C5' C B1222 10.744 88.525 99.329 1.00 39.51 C
ATOM 7 C4' C B1222 9.582 89.275 99.880 1.00 38.99 C
ATOM 8 O4' C B1222 10.065 90.400 100.656 1.00 38.46 O
ATOM 9 C3' C B1222 8.770 89.973 98.814 1.00 37.07 C
ATOM 10 O3' C B1222 7.928 89.089 98.130 1.00 33.52 O
ATOM 11 C2' C B1222 8.015 91.000 99.628 1.00 37.40 C
ATOM 12 O2' C B1222 6.980 90.384 100.369 1.00 39.09 O
ATOM 13 C1' C B1222 9.123 91.467 100.573 1.00 39.06 C
ATOM 14 N1 C B1222 9.808 92.670 100.071 1.00 40.32 N
ATOM 15 C2 C B1222 9.222 93.925 100.291 1.00 40.81 C
ATOM 16 O2 C B1222 8.136 93.992 100.891 1.00 40.26 O
ATOM 17 N3 C B1222 9.855 95.032 99.847 1.00 41.67 N
ATOM 18 C4 C B1222 11.030 94.924 99.218 1.00 42.12 C
ATOM 19 N4 C B1222 11.643 96.048 98.837 1.00 41.71 N
ATOM 20 C5 C B1222 11.636 93.660 98.964 1.00 41.38 C
ATOM 21 C6 C B1222 10.997 92.571 99.403 1.00 41.05 C
ATOM 22 P U B1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 23 OP1 U B1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 24 OP2 U B1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 25 O5' U B1223 6.756 90.655 96.589 1.00 30.25 O
TER
ATOM 2 P U A1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 3 OP1 U A1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 4 OP2 U A1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 5 O5' U A1223 6.756 90.655 96.589 1.00 30.25 O
ATOM 6 C5' U A1223 5.447 90.639 97.142 1.00 31.59 C
ATOM 7 C4' U A1223 4.839 92.013 97.099 1.00 34.30 C
ATOM 8 O4' U A1223 5.603 92.898 97.942 1.00 33.96 O
ATOM 9 C3' U A1223 4.856 92.722 95.759 1.00 35.33 C
ATOM 10 O3' U A1223 3.823 92.276 94.893 1.00 37.88 O
ATOM 11 C2' U A1223 4.693 94.176 96.167 1.00 34.15 C
ATOM 12 O2' U A1223 3.377 94.512 96.535 1.00 33.11 O
ATOM 13 C1' U A1223 5.563 94.211 97.413 1.00 34.34 C
ATOM 14 N1 U A1223 6.926 94.632 97.079 1.00 36.12 N
ATOM 15 C2 U A1223 7.167 95.981 97.090 1.00 36.62 C
ATOM 16 O2 U A1223 6.311 96.799 97.369 1.00 35.76 O
ATOM 17 N3 U A1223 8.439 96.341 96.749 1.00 36.30 N
ATOM 18 C4 U A1223 9.466 95.509 96.384 1.00 36.38 C
ATOM 19 O4 U A1223 10.468 96.007 95.879 1.00 37.05 O
ATOM 20 C5 U A1223 9.146 94.115 96.416 1.00 36.41 C
ATOM 21 C6 U A1223 7.917 93.735 96.754 1.00 35.92 C
ATOM 22 P G A1224 3.951 92.524 93.316 1.00 39.54 P
ATOM 23 OP1 G A1224 3.002 91.568 92.705 1.00 39.18 O
ATOM 24 OP2 G A1224 5.378 92.482 92.927 1.00 39.71 O
ATOM 25 O5' G A1224 3.381 93.994 93.113 1.00 36.48 O
TER
ATOM 1 O3' C B1221 13.730 88.809 99.319 1.00 40.61 O
ATOM 2 P C B1222 12.917 88.993 97.959 1.00 40.63 P
ATOM 3 OP1 C B1222 12.876 87.677 97.298 1.00 40.76 O
ATOM 4 OP2 C B1222 13.433 90.171 97.222 1.00 40.95 O
ATOM 5 O5' C B1222 11.478 89.387 98.475 1.00 39.67 O
ATOM 6 C5' C B1222 10.744 88.525 99.329 1.00 39.51 C
ATOM 7 C4' C B1222 9.582 89.275 99.880 1.00 38.99 C
ATOM 8 O4' C B1222 10.065 90.400 100.656 1.00 38.46 O
ATOM 9 C3' C B1222 8.770 89.973 98.814 1.00 37.07 C
ATOM 10 O3' C B1222 7.928 89.089 98.130 1.00 33.52 O
ATOM 11 C2' C B1222 8.015 91.000 99.628 1.00 37.40 C
ATOM 12 O2' C B1222 6.980 90.384 100.369 1.00 39.09 O
ATOM 13 C1' C B1222 9.123 91.467 100.573 1.00 39.06 C
ATOM 14 N1 C B1222 9.808 92.670 100.071 1.00 40.32 N
ATOM 15 C2 C B1222 9.222 93.925 100.291 1.00 40.81 C
ATOM 16 O2 C B1222 8.136 93.992 100.891 1.00 40.26 O
ATOM 17 N3 C B1222 9.855 95.032 99.847 1.00 41.67 N
ATOM 18 C4 C B1222 11.030 94.924 99.218 1.00 42.12 C
ATOM 19 N4 C B1222 11.643 96.048 98.837 1.00 41.71 N
ATOM 20 C5 C B1222 11.636 93.660 98.964 1.00 41.38 C
ATOM 21 C6 C B1222 10.997 92.571 99.403 1.00 41.05 C
ATOM 22 P U B1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 23 OP1 U B1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 24 OP2 U B1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 25 O5' U B1223 6.756 90.655 96.589 1.00 30.25 O
TER
Atoms:
C4: (9.466,95.509,96.384)
N3: (8.439,96.341,96.749)
OP1: (6.822,88.193,96.199)
OP2: (8.886,89.602,95.859)
C2: (7.167,95.981,97.090)
C1': (5.563,94.211,97.413)
C3': (4.856,92.722,95.759)
O5': (6.756,90.655,96.589)
O4': (5.603,92.898,97.942)
C5': (5.447,90.639,97.142)
P: (7.639,89.336,96.586)
C4': (4.839,92.013,97.099)
C2': (4.693,94.176,96.167)
O2': (3.377,94.512,96.535)
N1: (6.926,94.632,97.079)
O4: (10.468,96.007,95.879)
O2: (6.311,96.799,97.369)
C6: (7.917,93.735,96.754)
C5: (9.146,94.115,96.416)
O3': (3.823,92.276,94.893)
N3: (8.439,96.341,96.749)
OP1: (6.822,88.193,96.199)
OP2: (8.886,89.602,95.859)
C2: (7.167,95.981,97.090)
C1': (5.563,94.211,97.413)
C3': (4.856,92.722,95.759)
O5': (6.756,90.655,96.589)
O4': (5.603,92.898,97.942)
C5': (5.447,90.639,97.142)
P: (7.639,89.336,96.586)
C4': (4.839,92.013,97.099)
C2': (4.693,94.176,96.167)
O2': (3.377,94.512,96.535)
N1: (6.926,94.632,97.079)
O4: (10.468,96.007,95.879)
O2: (6.311,96.799,97.369)
C6: (7.917,93.735,96.754)
C5: (9.146,94.115,96.416)
O3': (3.823,92.276,94.893)
C2: (9.222,93.925,100.291)
OP1: (12.876,87.677,97.298)
OP2: (13.433,90.171,97.222)
C4: (11.030,94.924,99.218)
O5': (11.478,89.387,98.475)
C3': (8.770,89.973,98.814)
C1': (9.123,91.467,100.573)
O4': (10.065,90.400,100.656)
C5': (10.744,88.525,99.329)
P: (12.917,88.993,97.959)
O2: (8.136,93.992,100.891)
C4': (9.582,89.275,99.880)
C2': (8.015,91.000,99.628)
O2': (6.980,90.384,100.369)
N1: (9.808,92.670,100.071)
N3: (9.855,95.032,99.847)
N4: (11.643,96.048,98.837)
C6: (10.997,92.571,99.403)
C5: (11.636,93.660,98.964)
O3': (7.928,89.089,98.130)
OP1: (12.876,87.677,97.298)
OP2: (13.433,90.171,97.222)
C4: (11.030,94.924,99.218)
O5': (11.478,89.387,98.475)
C3': (8.770,89.973,98.814)
C1': (9.123,91.467,100.573)
O4': (10.065,90.400,100.656)
C5': (10.744,88.525,99.329)
P: (12.917,88.993,97.959)
O2: (8.136,93.992,100.891)
C4': (9.582,89.275,99.880)
C2': (8.015,91.000,99.628)
O2': (6.980,90.384,100.369)
N1: (9.808,92.670,100.071)
N3: (9.855,95.032,99.847)
N4: (11.643,96.048,98.837)
C6: (10.997,92.571,99.403)
C5: (11.636,93.660,98.964)
O3': (7.928,89.089,98.130)
Image (generated by PyMOL):