ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D2G:B64:B65

Extra

PDB:
ATOM 1 O3' G A 63 6.183 -50.405 11.290 1.00 42.87 O
ATOM 2 P C A 64 5.190 -50.983 12.438 1.00 46.50 P
ATOM 3 OP1 C A 64 5.906 -51.987 13.192 1.00 46.14 O
ATOM 4 OP2 C A 64 3.908 -51.307 11.812 1.00 40.35 O
ATOM 5 O5' C A 64 5.084 -49.733 13.474 1.00 43.56 O
ATOM 6 C5' C A 64 6.242 -49.074 13.984 1.00 40.68 C
ATOM 7 C4' C A 64 5.830 -47.742 14.602 1.00 39.41 C
ATOM 8 O4' C A 64 5.568 -46.697 13.579 1.00 41.98 O
ATOM 9 C3' C A 64 4.554 -47.783 15.460 1.00 40.08 C
ATOM 10 O3' C A 64 4.949 -48.115 16.774 1.00 36.62 O
ATOM 11 C2' C A 64 4.109 -46.305 15.358 1.00 40.94 C
ATOM 12 O2' C A 64 4.925 -45.422 16.133 1.00 34.21 O
ATOM 13 C1' C A 64 4.391 -45.974 13.890 1.00 36.92 C
ATOM 14 N1 C A 64 3.263 -46.195 12.888 1.00 36.45 N
ATOM 15 C2 C A 64 2.324 -45.173 12.830 1.00 35.78 C
ATOM 16 O2 C A 64 2.451 -44.152 13.578 1.00 38.57 O
ATOM 17 N3 C A 64 1.280 -45.321 11.990 1.00 31.63 N
ATOM 18 C4 C A 64 1.122 -46.338 11.168 1.00 37.65 C
ATOM 19 N4 C A 64 0.018 -46.280 10.386 1.00 34.39 N
ATOM 20 C5 C A 64 2.042 -47.457 11.229 1.00 33.50 C
ATOM 21 C6 C A 64 3.080 -47.306 12.098 1.00 35.54 C
ATOM 22 P G A 65 3.971 -48.836 17.784 1.00 45.36 P
ATOM 23 OP1 G A 65 2.748 -47.987 18.094 1.00 40.95 O
ATOM 24 OP2 G A 65 4.795 -49.479 18.818 1.00 43.89 O
ATOM 25 O5' G A 65 3.368 -50.009 16.914 1.00 40.91 O
TER

ATOM 1 O3' C B 64 4.949 -48.115 16.774 1.00 36.62 O
ATOM 2 P G B 65 3.971 -48.836 17.784 1.00 45.36 P
ATOM 3 OP1 G B 65 2.748 -47.987 18.094 1.00 40.95 O
ATOM 4 OP2 G B 65 4.795 -49.479 18.818 1.00 43.89 O
ATOM 5 O5' G B 65 3.368 -50.009 16.914 1.00 40.91 O
ATOM 6 C5' G B 65 2.632 -50.967 17.662 1.00 39.30 C
ATOM 7 C4' G B 65 1.712 -51.598 16.679 1.00 38.49 C
ATOM 8 O4' G B 65 0.664 -50.631 16.403 1.00 38.33 O
ATOM 9 C3' G B 65 2.332 -51.988 15.328 1.00 39.47 C
ATOM 10 O3' G B 65 1.614 -53.158 14.855 1.00 43.99 O
ATOM 11 C2' G B 65 1.996 -50.752 14.439 1.00 38.18 C
ATOM 12 O2' G B 65 1.789 -51.073 13.078 1.00 35.71 O
ATOM 13 C1' G B 65 0.644 -50.285 14.991 1.00 36.61 C
ATOM 14 N9 G B 65 0.324 -48.855 14.913 1.00 40.79 N
ATOM 15 C8 G B 65 0.819 -47.907 15.763 1.00 36.56 C
ATOM 16 N7 G B 65 0.413 -46.691 15.482 1.00 36.99 N
ATOM 17 C5 G B 65 -0.432 -46.863 14.363 1.00 36.42 C
ATOM 18 C6 G B 65 -1.183 -45.929 13.580 1.00 34.49 C
ATOM 19 O6 G B 65 -1.242 -44.721 13.853 1.00 41.46 O
ATOM 20 N1 G B 65 -1.925 -46.495 12.517 1.00 35.09 N
ATOM 21 C2 G B 65 -1.868 -47.872 12.228 1.00 35.05 C
ATOM 22 N2 G B 65 -2.551 -48.434 11.158 1.00 31.46 N
ATOM 23 N3 G B 65 -1.147 -48.664 12.961 1.00 33.50 N
ATOM 24 C4 G B 65 -0.481 -48.170 14.006 1.00 35.19 C
ATOM 25 P C B 66 2.269 -54.638 14.595 1.00 38.73 P
ATOM 26 OP1 C B 66 3.749 -54.468 14.552 1.00 35.82 O
ATOM 27 OP2 C B 66 1.300 -55.383 13.680 1.00 43.70 O
ATOM 28 O5' C B 66 1.947 -55.373 15.939 1.00 32.68 O
TER

Atoms:
C2: (2.324,-45.173,12.830)
OP1: (5.906,-51.987,13.192)
OP2: (3.908,-51.307,11.812)
C4: (1.122,-46.338,11.168)
O5': (5.084,-49.733,13.474)
C3': (4.554,-47.783,15.460)
C1': (4.391,-45.974,13.890)
O4': (5.568,-46.697,13.579)
C5': (6.242,-49.074,13.984)
P: (5.190,-50.983,12.438)
O2: (2.451,-44.152,13.578)
C4': (5.830,-47.742,14.602)
C2': (4.109,-46.305,15.358)
O2': (4.925,-45.422,16.133)
N1: (3.263,-46.195,12.888)
N3: (1.280,-45.321,11.990)
N4: (0.018,-46.280,10.386)
C6: (3.080,-47.306,12.098)
C5: (2.042,-47.457,11.229)
O3': (4.949,-48.115,16.774)
OP1: (2.748,-47.987,18.094)
OP2: (4.795,-49.479,18.818)
C3': (2.332,-51.988,15.328)
C1': (0.644,-50.285,14.991)
C5': (2.632,-50.967,17.662)
O6: (-1.242,-44.721,13.853)
O4': (0.664,-50.631,16.403)
C8: (0.819,-47.907,15.763)
C2: (-1.868,-47.872,12.228)
C6: (-1.183,-45.929,13.580)
C5: (-0.432,-46.863,14.363)
C4: (-0.481,-48.170,14.006)
P: (3.971,-48.836,17.784)
C4': (1.712,-51.598,16.679)
C2': (1.996,-50.752,14.439)
O2': (1.789,-51.073,13.078)
N1: (-1.925,-46.495,12.517)
N2: (-2.551,-48.434,11.158)
N3: (-1.147,-48.664,12.961)
N7: (0.413,-46.691,15.482)
N9: (0.324,-48.855,14.913)
O5': (3.368,-50.009,16.914)
O3': (1.614,-53.158,14.855)
Image (generated by PyMOL):
PyMOL image
show in jmol