Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51382:5609
Extra
PDB:
ATOM 1 O3' G A1381 107.556 -3.659 219.008 1.00 37.03 O
ATOM 2 P C A1382 108.318 -2.261 218.817 1.00 39.15 P
ATOM 3 OP1 C A1382 107.322 -1.165 219.107 1.00 39.21 O
ATOM 4 OP2 C A1382 108.955 -2.308 217.485 1.00 39.28 O
ATOM 5 O5' C A1382 109.473 -2.288 219.953 1.00 38.73 O
ATOM 6 C5' C A1382 109.238 -1.860 221.323 1.00 38.50 C
ATOM 7 C4' C A1382 110.528 -1.435 222.065 1.00 38.11 C
ATOM 8 O4' C A1382 111.614 -2.397 221.839 1.00 38.02 O
ATOM 9 C3' C A1382 111.104 -0.091 221.664 1.00 38.00 C
ATOM 10 O3' C A1382 111.838 0.447 222.743 1.00 37.66 O
ATOM 11 C2' C A1382 112.087 -0.497 220.592 1.00 38.03 C
ATOM 12 O2' C A1382 113.073 0.462 220.304 1.00 37.86 O
ATOM 13 C1' C A1382 112.688 -1.739 221.194 1.00 37.90 C
ATOM 14 N1 C A1382 113.240 -2.635 220.188 1.00 38.05 N
ATOM 15 C2 C A1382 114.555 -3.039 220.139 1.00 37.87 C
ATOM 16 O2 C A1382 115.322 -2.669 221.010 1.00 37.57 O
ATOM 17 N3 C A1382 115.025 -3.826 219.177 1.00 38.03 N
ATOM 18 C4 C A1382 114.198 -4.226 218.255 1.00 38.36 C
ATOM 19 N4 C A1382 114.639 -5.037 217.312 1.00 38.54 N
ATOM 20 C5 C A1382 112.855 -3.823 218.258 1.00 38.55 C
ATOM 21 C6 C A1382 112.419 -3.013 219.207 1.00 38.39 C
ATOM 22 P A A1383 111.112 1.013 224.061 1.00 32.13 P
ATOM 23 OP1 A A1383 111.436 0.045 225.192 1.00 31.95 O
ATOM 24 OP2 A A1383 109.709 1.263 223.720 1.00 32.43 O
ATOM 25 O5' A A1383 111.883 2.392 224.293 1.00 31.90 O
TER
ATOM 1 O3' G B 608 113.830 -3.485 210.284 1.00 39.74 O
ATOM 2 P G B 609 113.486 -4.635 211.348 1.00 40.51 P
ATOM 3 OP1 G B 609 113.412 -5.911 210.596 1.00 40.80 O
ATOM 4 OP2 G B 609 112.321 -4.191 212.107 1.00 40.49 O
ATOM 5 O5' G B 609 114.768 -4.649 212.284 1.00 40.09 O
ATOM 6 C5' G B 609 115.965 -5.250 211.848 1.00 40.05 C
ATOM 7 C4' G B 609 117.039 -5.042 212.838 1.00 39.65 C
ATOM 8 O4' G B 609 117.120 -3.634 213.148 1.00 39.46 O
ATOM 9 C3' G B 609 116.837 -5.700 214.174 1.00 39.44 C
ATOM 10 O3' G B 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 11 C2' G B 609 117.675 -4.824 215.091 1.00 39.05 C
ATOM 12 O2' G B 609 119.032 -5.209 215.000 1.00 38.91 O
ATOM 13 C1' G B 609 117.525 -3.442 214.471 1.00 39.10 C
ATOM 14 N9 G B 609 116.481 -2.674 215.158 1.00 39.05 N
ATOM 15 C8 G B 609 115.199 -2.574 214.713 1.00 39.34 C
ATOM 16 N7 G B 609 114.450 -1.923 215.535 1.00 39.24 N
ATOM 17 C5 G B 609 115.244 -1.576 216.572 1.00 38.88 C
ATOM 18 C6 G B 609 114.951 -0.867 217.722 1.00 38.66 C
ATOM 19 O6 G B 609 113.906 -0.379 218.083 1.00 38.73 O
ATOM 20 N1 G B 609 116.046 -0.721 218.536 1.00 38.32 N
ATOM 21 C2 G B 609 117.291 -1.182 218.290 1.00 38.21 C
ATOM 22 N2 G B 609 118.203 -0.898 219.233 1.00 37.88 N
ATOM 23 N3 G B 609 117.576 -1.867 217.193 1.00 38.42 N
ATOM 24 C4 G B 609 116.516 -2.025 216.376 1.00 38.75 C
ATOM 25 P A B 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 26 OP1 A B 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 27 OP2 A B 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 28 O5' A B 610 116.658 -9.319 214.763 1.00 35.46 O
TER
ATOM 2 P C A1382 108.318 -2.261 218.817 1.00 39.15 P
ATOM 3 OP1 C A1382 107.322 -1.165 219.107 1.00 39.21 O
ATOM 4 OP2 C A1382 108.955 -2.308 217.485 1.00 39.28 O
ATOM 5 O5' C A1382 109.473 -2.288 219.953 1.00 38.73 O
ATOM 6 C5' C A1382 109.238 -1.860 221.323 1.00 38.50 C
ATOM 7 C4' C A1382 110.528 -1.435 222.065 1.00 38.11 C
ATOM 8 O4' C A1382 111.614 -2.397 221.839 1.00 38.02 O
ATOM 9 C3' C A1382 111.104 -0.091 221.664 1.00 38.00 C
ATOM 10 O3' C A1382 111.838 0.447 222.743 1.00 37.66 O
ATOM 11 C2' C A1382 112.087 -0.497 220.592 1.00 38.03 C
ATOM 12 O2' C A1382 113.073 0.462 220.304 1.00 37.86 O
ATOM 13 C1' C A1382 112.688 -1.739 221.194 1.00 37.90 C
ATOM 14 N1 C A1382 113.240 -2.635 220.188 1.00 38.05 N
ATOM 15 C2 C A1382 114.555 -3.039 220.139 1.00 37.87 C
ATOM 16 O2 C A1382 115.322 -2.669 221.010 1.00 37.57 O
ATOM 17 N3 C A1382 115.025 -3.826 219.177 1.00 38.03 N
ATOM 18 C4 C A1382 114.198 -4.226 218.255 1.00 38.36 C
ATOM 19 N4 C A1382 114.639 -5.037 217.312 1.00 38.54 N
ATOM 20 C5 C A1382 112.855 -3.823 218.258 1.00 38.55 C
ATOM 21 C6 C A1382 112.419 -3.013 219.207 1.00 38.39 C
ATOM 22 P A A1383 111.112 1.013 224.061 1.00 32.13 P
ATOM 23 OP1 A A1383 111.436 0.045 225.192 1.00 31.95 O
ATOM 24 OP2 A A1383 109.709 1.263 223.720 1.00 32.43 O
ATOM 25 O5' A A1383 111.883 2.392 224.293 1.00 31.90 O
TER
ATOM 1 O3' G B 608 113.830 -3.485 210.284 1.00 39.74 O
ATOM 2 P G B 609 113.486 -4.635 211.348 1.00 40.51 P
ATOM 3 OP1 G B 609 113.412 -5.911 210.596 1.00 40.80 O
ATOM 4 OP2 G B 609 112.321 -4.191 212.107 1.00 40.49 O
ATOM 5 O5' G B 609 114.768 -4.649 212.284 1.00 40.09 O
ATOM 6 C5' G B 609 115.965 -5.250 211.848 1.00 40.05 C
ATOM 7 C4' G B 609 117.039 -5.042 212.838 1.00 39.65 C
ATOM 8 O4' G B 609 117.120 -3.634 213.148 1.00 39.46 O
ATOM 9 C3' G B 609 116.837 -5.700 214.174 1.00 39.44 C
ATOM 10 O3' G B 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 11 C2' G B 609 117.675 -4.824 215.091 1.00 39.05 C
ATOM 12 O2' G B 609 119.032 -5.209 215.000 1.00 38.91 O
ATOM 13 C1' G B 609 117.525 -3.442 214.471 1.00 39.10 C
ATOM 14 N9 G B 609 116.481 -2.674 215.158 1.00 39.05 N
ATOM 15 C8 G B 609 115.199 -2.574 214.713 1.00 39.34 C
ATOM 16 N7 G B 609 114.450 -1.923 215.535 1.00 39.24 N
ATOM 17 C5 G B 609 115.244 -1.576 216.572 1.00 38.88 C
ATOM 18 C6 G B 609 114.951 -0.867 217.722 1.00 38.66 C
ATOM 19 O6 G B 609 113.906 -0.379 218.083 1.00 38.73 O
ATOM 20 N1 G B 609 116.046 -0.721 218.536 1.00 38.32 N
ATOM 21 C2 G B 609 117.291 -1.182 218.290 1.00 38.21 C
ATOM 22 N2 G B 609 118.203 -0.898 219.233 1.00 37.88 N
ATOM 23 N3 G B 609 117.576 -1.867 217.193 1.00 38.42 N
ATOM 24 C4 G B 609 116.516 -2.025 216.376 1.00 38.75 C
ATOM 25 P A B 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 26 OP1 A B 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 27 OP2 A B 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 28 O5' A B 610 116.658 -9.319 214.763 1.00 35.46 O
TER
Atoms:
C2: (114.555,-3.039,220.139)
OP1: (107.322,-1.165,219.107)
OP2: (108.955,-2.308,217.485)
C4: (114.198,-4.226,218.255)
O5': (109.473,-2.288,219.953)
C3': (111.104,-0.091,221.664)
C1': (112.688,-1.739,221.194)
O4': (111.614,-2.397,221.839)
C5': (109.238,-1.860,221.323)
P: (108.318,-2.261,218.817)
O2: (115.322,-2.669,221.010)
C4': (110.528,-1.435,222.065)
C2': (112.087,-0.497,220.592)
O2': (113.073,0.462,220.304)
N1: (113.240,-2.635,220.188)
N3: (115.025,-3.826,219.177)
N4: (114.639,-5.037,217.312)
C6: (112.419,-3.013,219.207)
C5: (112.855,-3.823,218.258)
O3': (111.838,0.447,222.743)
OP1: (107.322,-1.165,219.107)
OP2: (108.955,-2.308,217.485)
C4: (114.198,-4.226,218.255)
O5': (109.473,-2.288,219.953)
C3': (111.104,-0.091,221.664)
C1': (112.688,-1.739,221.194)
O4': (111.614,-2.397,221.839)
C5': (109.238,-1.860,221.323)
P: (108.318,-2.261,218.817)
O2: (115.322,-2.669,221.010)
C4': (110.528,-1.435,222.065)
C2': (112.087,-0.497,220.592)
O2': (113.073,0.462,220.304)
N1: (113.240,-2.635,220.188)
N3: (115.025,-3.826,219.177)
N4: (114.639,-5.037,217.312)
C6: (112.419,-3.013,219.207)
C5: (112.855,-3.823,218.258)
O3': (111.838,0.447,222.743)
OP1: (113.412,-5.911,210.596)
OP2: (112.321,-4.191,212.107)
C3': (116.837,-5.700,214.174)
C1': (117.525,-3.442,214.471)
C5': (115.965,-5.250,211.848)
O6: (113.906,-0.379,218.083)
O4': (117.120,-3.634,213.148)
C8: (115.199,-2.574,214.713)
C2: (117.291,-1.182,218.290)
C6: (114.951,-0.867,217.722)
C5: (115.244,-1.576,216.572)
C4: (116.516,-2.025,216.376)
P: (113.486,-4.635,211.348)
C4': (117.039,-5.042,212.838)
C2': (117.675,-4.824,215.091)
O2': (119.032,-5.209,215.000)
N1: (116.046,-0.721,218.536)
N2: (118.203,-0.898,219.233)
N3: (117.576,-1.867,217.193)
N7: (114.450,-1.923,215.535)
N9: (116.481,-2.674,215.158)
O5': (114.768,-4.649,212.284)
O3': (117.303,-7.024,214.190)
OP2: (112.321,-4.191,212.107)
C3': (116.837,-5.700,214.174)
C1': (117.525,-3.442,214.471)
C5': (115.965,-5.250,211.848)
O6: (113.906,-0.379,218.083)
O4': (117.120,-3.634,213.148)
C8: (115.199,-2.574,214.713)
C2: (117.291,-1.182,218.290)
C6: (114.951,-0.867,217.722)
C5: (115.244,-1.576,216.572)
C4: (116.516,-2.025,216.376)
P: (113.486,-4.635,211.348)
C4': (117.039,-5.042,212.838)
C2': (117.675,-4.824,215.091)
O2': (119.032,-5.209,215.000)
N1: (116.046,-0.721,218.536)
N2: (118.203,-0.898,219.233)
N3: (117.576,-1.867,217.193)
N7: (114.450,-1.923,215.535)
N9: (116.481,-2.674,215.158)
O5': (114.768,-4.649,212.284)
O3': (117.303,-7.024,214.190)
Image (generated by PyMOL):