Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:C28:C29
Extra
PDB:
ATOM 1 O3' G A 27 -35.367 -24.679 7.882 1.00 11.90 O
ATOM 2 P C A 28 -34.765 -23.858 6.645 1.00 12.71 P
ATOM 3 OP1 C A 28 -35.075 -22.425 6.852 1.00 8.15 O
ATOM 4 OP2 C A 28 -35.200 -24.537 5.390 1.00 6.75 O
ATOM 5 O5' C A 28 -33.201 -24.006 6.866 1.00 8.99 O
ATOM 6 C5' C A 28 -32.611 -23.403 7.999 1.00 10.61 C
ATOM 7 C4' C A 28 -31.133 -23.672 8.044 1.00 12.45 C
ATOM 8 O4' C A 28 -30.855 -25.050 8.376 1.00 12.52 O
ATOM 9 C3' C A 28 -30.372 -23.458 6.752 1.00 13.64 C
ATOM 10 O3' C A 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 11 C2' C A 28 -29.086 -24.207 7.026 1.00 12.91 C
ATOM 12 O2' C A 28 -28.284 -23.446 7.885 1.00 12.43 O
ATOM 13 C1' C A 28 -29.607 -25.414 7.810 1.00 12.89 C
ATOM 14 N1 C A 28 -29.818 -26.585 6.962 1.00 15.50 N
ATOM 15 C2 C A 28 -28.781 -27.494 6.823 1.00 15.37 C
ATOM 16 O2 C A 28 -27.700 -27.254 7.389 1.00 17.62 O
ATOM 17 N3 C A 28 -28.972 -28.600 6.072 1.00 14.16 N
ATOM 18 C4 C A 28 -30.138 -28.792 5.459 1.00 14.61 C
ATOM 19 N4 C A 28 -30.285 -29.889 4.728 1.00 19.43 N
ATOM 20 C5 C A 28 -31.206 -27.865 5.568 1.00 15.46 C
ATOM 21 C6 C A 28 -31.008 -26.787 6.323 1.00 15.90 C
ATOM 22 P G A 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 23 OP1 G A 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 24 OP2 G A 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 25 O5' G A 29 -30.432 -22.421 4.076 1.00 17.19 O
TER
ATOM 1 O3' C B 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 2 P G B 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 3 OP1 G B 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 4 OP2 G B 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 5 O5' G B 29 -30.432 -22.421 4.076 1.00 17.19 O
ATOM 6 C5' G B 29 -30.934 -21.805 2.880 1.00 16.18 C
ATOM 7 C4' G B 29 -31.960 -22.706 2.227 1.00 15.65 C
ATOM 8 O4' G B 29 -31.306 -23.869 1.657 1.00 15.29 O
ATOM 9 C3' G B 29 -32.993 -23.268 3.190 1.00 16.15 C
ATOM 10 O3' G B 29 -34.177 -23.569 2.495 1.00 16.79 O
ATOM 11 C2' G B 29 -32.344 -24.558 3.650 1.00 15.49 C
ATOM 12 O2' G B 29 -33.278 -25.487 4.131 1.00 11.71 O
ATOM 13 C1' G B 29 -31.701 -25.038 2.356 1.00 16.26 C
ATOM 14 N9 G B 29 -30.500 -25.808 2.633 1.00 18.54 N
ATOM 15 C8 G B 29 -29.436 -25.401 3.394 1.00 20.72 C
ATOM 16 N7 G B 29 -28.482 -26.286 3.453 1.00 23.90 N
ATOM 17 C5 G B 29 -28.951 -27.345 2.689 1.00 21.56 C
ATOM 18 C6 G B 29 -28.349 -28.589 2.386 1.00 21.90 C
ATOM 19 O6 G B 29 -27.233 -29.018 2.737 1.00 20.25 O
ATOM 20 N1 G B 29 -29.175 -29.368 1.583 1.00 22.01 N
ATOM 21 C2 G B 29 -30.411 -28.994 1.128 1.00 22.70 C
ATOM 22 N2 G B 29 -31.048 -29.887 0.368 1.00 24.64 N
ATOM 23 N3 G B 29 -30.979 -27.833 1.399 1.00 21.89 N
ATOM 24 C4 G B 29 -30.199 -27.065 2.181 1.00 19.48 C
ATOM 25 P A B 30 -35.501 -22.738 2.815 1.00 19.67 P
ATOM 26 OP1 A B 30 -35.329 -22.103 4.142 1.00 22.70 O
ATOM 27 OP2 A B 30 -36.688 -23.608 2.556 1.00 22.88 O
ATOM 28 O5' A B 30 -35.482 -21.622 1.694 1.00 19.31 O
TER
ATOM 2 P C A 28 -34.765 -23.858 6.645 1.00 12.71 P
ATOM 3 OP1 C A 28 -35.075 -22.425 6.852 1.00 8.15 O
ATOM 4 OP2 C A 28 -35.200 -24.537 5.390 1.00 6.75 O
ATOM 5 O5' C A 28 -33.201 -24.006 6.866 1.00 8.99 O
ATOM 6 C5' C A 28 -32.611 -23.403 7.999 1.00 10.61 C
ATOM 7 C4' C A 28 -31.133 -23.672 8.044 1.00 12.45 C
ATOM 8 O4' C A 28 -30.855 -25.050 8.376 1.00 12.52 O
ATOM 9 C3' C A 28 -30.372 -23.458 6.752 1.00 13.64 C
ATOM 10 O3' C A 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 11 C2' C A 28 -29.086 -24.207 7.026 1.00 12.91 C
ATOM 12 O2' C A 28 -28.284 -23.446 7.885 1.00 12.43 O
ATOM 13 C1' C A 28 -29.607 -25.414 7.810 1.00 12.89 C
ATOM 14 N1 C A 28 -29.818 -26.585 6.962 1.00 15.50 N
ATOM 15 C2 C A 28 -28.781 -27.494 6.823 1.00 15.37 C
ATOM 16 O2 C A 28 -27.700 -27.254 7.389 1.00 17.62 O
ATOM 17 N3 C A 28 -28.972 -28.600 6.072 1.00 14.16 N
ATOM 18 C4 C A 28 -30.138 -28.792 5.459 1.00 14.61 C
ATOM 19 N4 C A 28 -30.285 -29.889 4.728 1.00 19.43 N
ATOM 20 C5 C A 28 -31.206 -27.865 5.568 1.00 15.46 C
ATOM 21 C6 C A 28 -31.008 -26.787 6.323 1.00 15.90 C
ATOM 22 P G A 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 23 OP1 G A 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 24 OP2 G A 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 25 O5' G A 29 -30.432 -22.421 4.076 1.00 17.19 O
TER
ATOM 1 O3' C B 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 2 P G B 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 3 OP1 G B 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 4 OP2 G B 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 5 O5' G B 29 -30.432 -22.421 4.076 1.00 17.19 O
ATOM 6 C5' G B 29 -30.934 -21.805 2.880 1.00 16.18 C
ATOM 7 C4' G B 29 -31.960 -22.706 2.227 1.00 15.65 C
ATOM 8 O4' G B 29 -31.306 -23.869 1.657 1.00 15.29 O
ATOM 9 C3' G B 29 -32.993 -23.268 3.190 1.00 16.15 C
ATOM 10 O3' G B 29 -34.177 -23.569 2.495 1.00 16.79 O
ATOM 11 C2' G B 29 -32.344 -24.558 3.650 1.00 15.49 C
ATOM 12 O2' G B 29 -33.278 -25.487 4.131 1.00 11.71 O
ATOM 13 C1' G B 29 -31.701 -25.038 2.356 1.00 16.26 C
ATOM 14 N9 G B 29 -30.500 -25.808 2.633 1.00 18.54 N
ATOM 15 C8 G B 29 -29.436 -25.401 3.394 1.00 20.72 C
ATOM 16 N7 G B 29 -28.482 -26.286 3.453 1.00 23.90 N
ATOM 17 C5 G B 29 -28.951 -27.345 2.689 1.00 21.56 C
ATOM 18 C6 G B 29 -28.349 -28.589 2.386 1.00 21.90 C
ATOM 19 O6 G B 29 -27.233 -29.018 2.737 1.00 20.25 O
ATOM 20 N1 G B 29 -29.175 -29.368 1.583 1.00 22.01 N
ATOM 21 C2 G B 29 -30.411 -28.994 1.128 1.00 22.70 C
ATOM 22 N2 G B 29 -31.048 -29.887 0.368 1.00 24.64 N
ATOM 23 N3 G B 29 -30.979 -27.833 1.399 1.00 21.89 N
ATOM 24 C4 G B 29 -30.199 -27.065 2.181 1.00 19.48 C
ATOM 25 P A B 30 -35.501 -22.738 2.815 1.00 19.67 P
ATOM 26 OP1 A B 30 -35.329 -22.103 4.142 1.00 22.70 O
ATOM 27 OP2 A B 30 -36.688 -23.608 2.556 1.00 22.88 O
ATOM 28 O5' A B 30 -35.482 -21.622 1.694 1.00 19.31 O
TER
Atoms:
C2: (-28.781,-27.494,6.823)
OP1: (-35.075,-22.425,6.852)
OP2: (-35.200,-24.537,5.390)
C4: (-30.138,-28.792,5.459)
O5': (-33.201,-24.006,6.866)
C3': (-30.372,-23.458,6.752)
C1': (-29.607,-25.414,7.810)
O4': (-30.855,-25.050,8.376)
C5': (-32.611,-23.403,7.999)
P: (-34.765,-23.858,6.645)
O2: (-27.700,-27.254,7.389)
C4': (-31.133,-23.672,8.044)
C2': (-29.086,-24.207,7.026)
O2': (-28.284,-23.446,7.885)
N1: (-29.818,-26.585,6.962)
N3: (-28.972,-28.600,6.072)
N4: (-30.285,-29.889,4.728)
C6: (-31.008,-26.787,6.323)
C5: (-31.206,-27.865,5.568)
O3': (-30.114,-22.091,6.548)
OP1: (-35.075,-22.425,6.852)
OP2: (-35.200,-24.537,5.390)
C4: (-30.138,-28.792,5.459)
O5': (-33.201,-24.006,6.866)
C3': (-30.372,-23.458,6.752)
C1': (-29.607,-25.414,7.810)
O4': (-30.855,-25.050,8.376)
C5': (-32.611,-23.403,7.999)
P: (-34.765,-23.858,6.645)
O2: (-27.700,-27.254,7.389)
C4': (-31.133,-23.672,8.044)
C2': (-29.086,-24.207,7.026)
O2': (-28.284,-23.446,7.885)
N1: (-29.818,-26.585,6.962)
N3: (-28.972,-28.600,6.072)
N4: (-30.285,-29.889,4.728)
C6: (-31.008,-26.787,6.323)
C5: (-31.206,-27.865,5.568)
O3': (-30.114,-22.091,6.548)
OP1: (-28.163,-22.140,5.109)
OP2: (-29.796,-20.149,4.991)
C3': (-32.993,-23.268,3.190)
C1': (-31.701,-25.038,2.356)
C5': (-30.934,-21.805,2.880)
O6: (-27.233,-29.018,2.737)
O4': (-31.306,-23.869,1.657)
C8: (-29.436,-25.401,3.394)
C2: (-30.411,-28.994,1.128)
C6: (-28.349,-28.589,2.386)
C5: (-28.951,-27.345,2.689)
C4: (-30.199,-27.065,2.181)
P: (-29.552,-21.613,5.137)
C4': (-31.960,-22.706,2.227)
C2': (-32.344,-24.558,3.650)
O2': (-33.278,-25.487,4.131)
N1: (-29.175,-29.368,1.583)
N2: (-31.048,-29.887,0.368)
N3: (-30.979,-27.833,1.399)
N7: (-28.482,-26.286,3.453)
N9: (-30.500,-25.808,2.633)
O5': (-30.432,-22.421,4.076)
O3': (-34.177,-23.569,2.495)
OP2: (-29.796,-20.149,4.991)
C3': (-32.993,-23.268,3.190)
C1': (-31.701,-25.038,2.356)
C5': (-30.934,-21.805,2.880)
O6: (-27.233,-29.018,2.737)
O4': (-31.306,-23.869,1.657)
C8: (-29.436,-25.401,3.394)
C2: (-30.411,-28.994,1.128)
C6: (-28.349,-28.589,2.386)
C5: (-28.951,-27.345,2.689)
C4: (-30.199,-27.065,2.181)
P: (-29.552,-21.613,5.137)
C4': (-31.960,-22.706,2.227)
C2': (-32.344,-24.558,3.650)
O2': (-33.278,-25.487,4.131)
N1: (-29.175,-29.368,1.583)
N2: (-31.048,-29.887,0.368)
N3: (-30.979,-27.833,1.399)
N7: (-28.482,-26.286,3.453)
N9: (-30.500,-25.808,2.633)
O5': (-30.432,-22.421,4.076)
O3': (-34.177,-23.569,2.495)
Image (generated by PyMOL):