Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0880:0879
Extra
PDB:
ATOM 1 O3' G A 879 65.250 117.729 54.827 1.00 28.90 O
ATOM 2 P C A 880 64.042 116.943 55.536 1.00 29.28 P
ATOM 3 OP1 C A 880 64.624 115.955 56.475 1.00 29.86 O
ATOM 4 OP2 C A 880 63.157 116.493 54.437 1.00 30.11 O
ATOM 5 O5' C A 880 63.269 118.042 56.383 1.00 27.34 O
ATOM 6 C5' C A 880 61.902 117.856 56.753 1.00 26.44 C
ATOM 7 C4' C A 880 61.533 118.812 57.862 1.00 28.32 C
ATOM 8 O4' C A 880 62.210 118.424 59.088 1.00 27.18 O
ATOM 9 C3' C A 880 61.891 120.273 57.623 1.00 27.67 C
ATOM 10 O3' C A 880 60.939 121.092 58.295 1.00 29.78 O
ATOM 11 C2' C A 880 63.246 120.390 58.323 1.00 28.63 C
ATOM 12 O2' C A 880 63.532 121.701 58.772 1.00 29.96 O
ATOM 13 C1' C A 880 63.040 119.476 59.530 1.00 27.40 C
ATOM 14 N1 C A 880 64.267 118.886 60.105 1.00 26.76 N
ATOM 15 C2 C A 880 64.792 119.434 61.275 1.00 28.36 C
ATOM 16 O2 C A 880 64.270 120.455 61.750 1.00 32.84 O
ATOM 17 N3 C A 880 65.860 118.849 61.860 1.00 28.18 N
ATOM 18 C4 C A 880 66.413 117.770 61.307 1.00 28.51 C
ATOM 19 N4 C A 880 67.447 117.207 61.937 1.00 28.08 N
ATOM 20 C5 C A 880 65.929 117.218 60.090 1.00 27.67 C
ATOM 21 C6 C A 880 64.865 117.802 59.527 1.00 27.06 C
ATOM 22 P A A 881 59.405 121.107 57.815 1.00 28.82 P
ATOM 23 OP1 A A 881 59.297 120.415 56.510 1.00 28.08 O
ATOM 24 OP2 A A 881 58.924 122.501 57.952 1.00 28.21 O
ATOM 25 O5' A A 881 58.664 120.219 58.903 1.00 26.61 O
TER
ATOM 1 O3' G B 878 64.548 123.747 54.397 1.00 27.59 O
ATOM 2 P G B 879 63.694 122.556 55.062 1.00 27.97 P
ATOM 3 OP1 G B 879 62.749 122.071 54.030 1.00 28.95 O
ATOM 4 OP2 G B 879 63.165 123.011 56.372 1.00 25.60 O
ATOM 5 O5' G B 879 64.783 121.419 55.284 1.00 25.00 O
ATOM 6 C5' G B 879 65.462 120.848 54.156 1.00 22.59 C
ATOM 7 C4' G B 879 66.462 119.812 54.601 1.00 24.46 C
ATOM 8 O4' G B 879 67.549 120.424 55.343 1.00 24.63 O
ATOM 9 C3' G B 879 65.967 118.725 55.538 1.00 23.27 C
ATOM 10 O3' G B 879 65.250 117.729 54.827 1.00 28.90 O
ATOM 11 C2' G B 879 67.278 118.178 56.083 1.00 21.63 C
ATOM 12 O2' G B 879 67.922 117.303 55.182 1.00 21.19 O
ATOM 13 C1' G B 879 68.096 119.463 56.240 1.00 21.80 C
ATOM 14 N9 G B 879 68.014 119.984 57.603 1.00 22.68 N
ATOM 15 C8 G B 879 67.239 121.024 58.060 1.00 21.89 C
ATOM 16 N7 G B 879 67.366 121.229 59.343 1.00 21.41 N
ATOM 17 C5 G B 879 68.289 120.273 59.755 1.00 18.78 C
ATOM 18 C6 G B 879 68.828 120.015 61.035 1.00 17.42 C
ATOM 19 O6 G B 879 68.609 120.605 62.087 1.00 17.00 O
ATOM 20 N1 G B 879 69.716 118.948 61.011 1.00 17.37 N
ATOM 21 C2 G B 879 70.053 118.227 59.894 1.00 18.24 C
ATOM 22 N2 G B 879 70.925 117.220 60.068 1.00 16.04 N
ATOM 23 N3 G B 879 69.569 118.470 58.694 1.00 18.53 N
ATOM 24 C4 G B 879 68.697 119.498 58.697 1.00 19.33 C
ATOM 25 P C B 880 64.042 116.943 55.536 1.00 29.28 P
ATOM 26 OP1 C B 880 64.624 115.955 56.475 1.00 29.86 O
ATOM 27 OP2 C B 880 63.157 116.493 54.437 1.00 30.11 O
ATOM 28 O5' C B 880 63.269 118.042 56.383 1.00 27.34 O
TER
ATOM 2 P C A 880 64.042 116.943 55.536 1.00 29.28 P
ATOM 3 OP1 C A 880 64.624 115.955 56.475 1.00 29.86 O
ATOM 4 OP2 C A 880 63.157 116.493 54.437 1.00 30.11 O
ATOM 5 O5' C A 880 63.269 118.042 56.383 1.00 27.34 O
ATOM 6 C5' C A 880 61.902 117.856 56.753 1.00 26.44 C
ATOM 7 C4' C A 880 61.533 118.812 57.862 1.00 28.32 C
ATOM 8 O4' C A 880 62.210 118.424 59.088 1.00 27.18 O
ATOM 9 C3' C A 880 61.891 120.273 57.623 1.00 27.67 C
ATOM 10 O3' C A 880 60.939 121.092 58.295 1.00 29.78 O
ATOM 11 C2' C A 880 63.246 120.390 58.323 1.00 28.63 C
ATOM 12 O2' C A 880 63.532 121.701 58.772 1.00 29.96 O
ATOM 13 C1' C A 880 63.040 119.476 59.530 1.00 27.40 C
ATOM 14 N1 C A 880 64.267 118.886 60.105 1.00 26.76 N
ATOM 15 C2 C A 880 64.792 119.434 61.275 1.00 28.36 C
ATOM 16 O2 C A 880 64.270 120.455 61.750 1.00 32.84 O
ATOM 17 N3 C A 880 65.860 118.849 61.860 1.00 28.18 N
ATOM 18 C4 C A 880 66.413 117.770 61.307 1.00 28.51 C
ATOM 19 N4 C A 880 67.447 117.207 61.937 1.00 28.08 N
ATOM 20 C5 C A 880 65.929 117.218 60.090 1.00 27.67 C
ATOM 21 C6 C A 880 64.865 117.802 59.527 1.00 27.06 C
ATOM 22 P A A 881 59.405 121.107 57.815 1.00 28.82 P
ATOM 23 OP1 A A 881 59.297 120.415 56.510 1.00 28.08 O
ATOM 24 OP2 A A 881 58.924 122.501 57.952 1.00 28.21 O
ATOM 25 O5' A A 881 58.664 120.219 58.903 1.00 26.61 O
TER
ATOM 1 O3' G B 878 64.548 123.747 54.397 1.00 27.59 O
ATOM 2 P G B 879 63.694 122.556 55.062 1.00 27.97 P
ATOM 3 OP1 G B 879 62.749 122.071 54.030 1.00 28.95 O
ATOM 4 OP2 G B 879 63.165 123.011 56.372 1.00 25.60 O
ATOM 5 O5' G B 879 64.783 121.419 55.284 1.00 25.00 O
ATOM 6 C5' G B 879 65.462 120.848 54.156 1.00 22.59 C
ATOM 7 C4' G B 879 66.462 119.812 54.601 1.00 24.46 C
ATOM 8 O4' G B 879 67.549 120.424 55.343 1.00 24.63 O
ATOM 9 C3' G B 879 65.967 118.725 55.538 1.00 23.27 C
ATOM 10 O3' G B 879 65.250 117.729 54.827 1.00 28.90 O
ATOM 11 C2' G B 879 67.278 118.178 56.083 1.00 21.63 C
ATOM 12 O2' G B 879 67.922 117.303 55.182 1.00 21.19 O
ATOM 13 C1' G B 879 68.096 119.463 56.240 1.00 21.80 C
ATOM 14 N9 G B 879 68.014 119.984 57.603 1.00 22.68 N
ATOM 15 C8 G B 879 67.239 121.024 58.060 1.00 21.89 C
ATOM 16 N7 G B 879 67.366 121.229 59.343 1.00 21.41 N
ATOM 17 C5 G B 879 68.289 120.273 59.755 1.00 18.78 C
ATOM 18 C6 G B 879 68.828 120.015 61.035 1.00 17.42 C
ATOM 19 O6 G B 879 68.609 120.605 62.087 1.00 17.00 O
ATOM 20 N1 G B 879 69.716 118.948 61.011 1.00 17.37 N
ATOM 21 C2 G B 879 70.053 118.227 59.894 1.00 18.24 C
ATOM 22 N2 G B 879 70.925 117.220 60.068 1.00 16.04 N
ATOM 23 N3 G B 879 69.569 118.470 58.694 1.00 18.53 N
ATOM 24 C4 G B 879 68.697 119.498 58.697 1.00 19.33 C
ATOM 25 P C B 880 64.042 116.943 55.536 1.00 29.28 P
ATOM 26 OP1 C B 880 64.624 115.955 56.475 1.00 29.86 O
ATOM 27 OP2 C B 880 63.157 116.493 54.437 1.00 30.11 O
ATOM 28 O5' C B 880 63.269 118.042 56.383 1.00 27.34 O
TER
Atoms:
C2: (64.792,119.434,61.275)
OP1: (64.624,115.955,56.475)
OP2: (63.157,116.493,54.437)
C4: (66.413,117.770,61.307)
O5': (63.269,118.042,56.383)
C3': (61.891,120.273,57.623)
C1': (63.040,119.476,59.530)
O4': (62.210,118.424,59.088)
C5': (61.902,117.856,56.753)
P: (64.042,116.943,55.536)
O2: (64.270,120.455,61.750)
C4': (61.533,118.812,57.862)
C2': (63.246,120.390,58.323)
O2': (63.532,121.701,58.772)
N1: (64.267,118.886,60.105)
N3: (65.860,118.849,61.860)
N4: (67.447,117.207,61.937)
C6: (64.865,117.802,59.527)
C5: (65.929,117.218,60.090)
O3': (60.939,121.092,58.295)
OP1: (64.624,115.955,56.475)
OP2: (63.157,116.493,54.437)
C4: (66.413,117.770,61.307)
O5': (63.269,118.042,56.383)
C3': (61.891,120.273,57.623)
C1': (63.040,119.476,59.530)
O4': (62.210,118.424,59.088)
C5': (61.902,117.856,56.753)
P: (64.042,116.943,55.536)
O2: (64.270,120.455,61.750)
C4': (61.533,118.812,57.862)
C2': (63.246,120.390,58.323)
O2': (63.532,121.701,58.772)
N1: (64.267,118.886,60.105)
N3: (65.860,118.849,61.860)
N4: (67.447,117.207,61.937)
C6: (64.865,117.802,59.527)
C5: (65.929,117.218,60.090)
O3': (60.939,121.092,58.295)
OP1: (62.749,122.071,54.030)
OP2: (63.165,123.011,56.372)
C3': (65.967,118.725,55.538)
C1': (68.096,119.463,56.240)
C5': (65.462,120.848,54.156)
O6: (68.609,120.605,62.087)
O4': (67.549,120.424,55.343)
C8: (67.239,121.024,58.060)
C2: (70.053,118.227,59.894)
C6: (68.828,120.015,61.035)
C5: (68.289,120.273,59.755)
C4: (68.697,119.498,58.697)
P: (63.694,122.556,55.062)
C4': (66.462,119.812,54.601)
C2': (67.278,118.178,56.083)
O2': (67.922,117.303,55.182)
N1: (69.716,118.948,61.011)
N2: (70.925,117.220,60.068)
N3: (69.569,118.470,58.694)
N7: (67.366,121.229,59.343)
N9: (68.014,119.984,57.603)
O5': (64.783,121.419,55.284)
O3': (65.250,117.729,54.827)
OP2: (63.165,123.011,56.372)
C3': (65.967,118.725,55.538)
C1': (68.096,119.463,56.240)
C5': (65.462,120.848,54.156)
O6: (68.609,120.605,62.087)
O4': (67.549,120.424,55.343)
C8: (67.239,121.024,58.060)
C2: (70.053,118.227,59.894)
C6: (68.828,120.015,61.035)
C5: (68.289,120.273,59.755)
C4: (68.697,119.498,58.697)
P: (63.694,122.556,55.062)
C4': (66.462,119.812,54.601)
C2': (67.278,118.178,56.083)
O2': (67.922,117.303,55.182)
N1: (69.716,118.948,61.011)
N2: (70.925,117.220,60.068)
N3: (69.569,118.470,58.694)
N7: (67.366,121.229,59.343)
N9: (68.014,119.984,57.603)
O5': (64.783,121.419,55.284)
O3': (65.250,117.729,54.827)
Image (generated by PyMOL):