Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:E4:E5
Extra
PDB:
ATOM 1 O3' G A 3 64.217 4.293 10.487 0.50 26.55 O
ATOM 2 P C A 4 62.721 4.828 10.474 1.00 28.81 P
ATOM 3 OP1 C A 4 62.198 4.891 11.862 1.00 30.15 O
ATOM 4 OP2 C A 4 61.978 4.095 9.432 1.00 28.09 O
ATOM 5 O5' C A 4 62.899 6.320 9.929 1.00 23.81 O
ATOM 6 C5' C A 4 63.683 7.271 10.623 1.00 23.00 C
ATOM 7 C4' C A 4 63.721 8.555 9.821 1.00 23.04 C
ATOM 8 O4' C A 4 64.481 8.359 8.608 1.00 23.42 O
ATOM 9 C3' C A 4 62.375 9.030 9.312 1.00 26.04 C
ATOM 10 O3' C A 4 61.680 9.609 10.379 1.00 26.28 O
ATOM 11 C2' C A 4 62.857 10.057 8.294 1.00 25.41 C
ATOM 12 O2' C A 4 63.360 11.244 8.889 1.00 25.12 O
ATOM 13 C1' C A 4 63.987 9.270 7.643 1.00 23.08 C
ATOM 14 N1 C A 4 63.578 8.512 6.433 1.00 20.41 N
ATOM 15 C2 C A 4 63.511 9.199 5.223 1.00 23.87 C
ATOM 16 O2 C A 4 63.777 10.408 5.215 1.00 25.01 O
ATOM 17 N3 C A 4 63.140 8.521 4.115 1.00 24.10 N
ATOM 18 C4 C A 4 62.860 7.223 4.191 1.00 23.13 C
ATOM 19 N4 C A 4 62.507 6.603 3.060 1.00 28.92 N
ATOM 20 C5 C A 4 62.924 6.502 5.418 1.00 24.42 C
ATOM 21 C6 C A 4 63.287 7.179 6.509 1.00 22.36 C
ATOM 22 P G A 5 60.086 9.673 10.378 0.50 29.24 P
ATOM 23 OP1 G A 5 59.654 9.829 11.779 0.50 29.93 O
ATOM 24 OP2 G A 5 59.549 8.569 9.545 0.50 27.69 O
ATOM 25 O5' G A 5 59.824 11.027 9.588 0.50 26.93 O
TER
ATOM 1 O3' C B 4 61.680 9.609 10.379 1.00 26.28 O
ATOM 2 P G B 5 60.086 9.673 10.378 0.50 29.24 P
ATOM 3 OP1 G B 5 59.654 9.829 11.779 0.50 29.93 O
ATOM 4 OP2 G B 5 59.549 8.569 9.545 0.50 27.69 O
ATOM 5 O5' G B 5 59.824 11.027 9.588 0.50 26.93 O
ATOM 6 C5' G B 5 59.053 10.966 8.411 0.50 28.07 C
ATOM 7 C4' G B 5 59.146 12.276 7.665 0.50 29.90 C
ATOM 8 O4' G B 5 60.317 12.286 6.805 0.50 26.93 O
ATOM 9 C3' G B 5 58.015 12.519 6.685 0.50 28.00 C
ATOM 10 O3' G B 5 56.807 12.868 7.355 0.50 29.99 O
ATOM 11 C2' G B 5 58.644 13.671 5.907 0.50 28.11 C
ATOM 12 O2' G B 5 58.745 14.869 6.652 0.50 31.44 O
ATOM 13 C1' G B 5 60.025 13.070 5.662 0.50 28.30 C
ATOM 14 N9 G B 5 59.989 12.225 4.478 0.50 27.17 N
ATOM 15 C8 G B 5 60.017 12.675 3.180 0.50 27.82 C
ATOM 16 N7 G B 5 59.952 11.721 2.300 0.50 22.11 N
ATOM 17 C5 G B 5 59.868 10.564 3.055 0.50 23.36 C
ATOM 18 C6 G B 5 59.773 9.219 2.635 0.50 23.30 C
ATOM 19 O6 G B 5 59.741 8.783 1.477 0.50 23.49 O
ATOM 20 N1 G B 5 59.705 8.344 3.716 0.50 23.72 N
ATOM 21 C2 G B 5 59.726 8.725 5.033 0.50 23.35 C
ATOM 22 N2 G B 5 59.655 7.732 5.928 0.50 28.53 N
ATOM 23 N3 G B 5 59.817 9.984 5.441 0.50 25.79 N
ATOM 24 C4 G B 5 59.882 10.853 4.403 0.50 24.66 C
ATOM 25 P G B 6 55.419 12.188 6.923 0.50 30.17 P
ATOM 26 OP1 G B 6 54.361 12.714 7.812 0.50 34.47 O
ATOM 27 OP2 G B 6 55.617 10.729 6.793 0.50 30.31 O
ATOM 28 O5' G B 6 55.192 12.788 5.469 0.50 27.47 O
TER
ATOM 2 P C A 4 62.721 4.828 10.474 1.00 28.81 P
ATOM 3 OP1 C A 4 62.198 4.891 11.862 1.00 30.15 O
ATOM 4 OP2 C A 4 61.978 4.095 9.432 1.00 28.09 O
ATOM 5 O5' C A 4 62.899 6.320 9.929 1.00 23.81 O
ATOM 6 C5' C A 4 63.683 7.271 10.623 1.00 23.00 C
ATOM 7 C4' C A 4 63.721 8.555 9.821 1.00 23.04 C
ATOM 8 O4' C A 4 64.481 8.359 8.608 1.00 23.42 O
ATOM 9 C3' C A 4 62.375 9.030 9.312 1.00 26.04 C
ATOM 10 O3' C A 4 61.680 9.609 10.379 1.00 26.28 O
ATOM 11 C2' C A 4 62.857 10.057 8.294 1.00 25.41 C
ATOM 12 O2' C A 4 63.360 11.244 8.889 1.00 25.12 O
ATOM 13 C1' C A 4 63.987 9.270 7.643 1.00 23.08 C
ATOM 14 N1 C A 4 63.578 8.512 6.433 1.00 20.41 N
ATOM 15 C2 C A 4 63.511 9.199 5.223 1.00 23.87 C
ATOM 16 O2 C A 4 63.777 10.408 5.215 1.00 25.01 O
ATOM 17 N3 C A 4 63.140 8.521 4.115 1.00 24.10 N
ATOM 18 C4 C A 4 62.860 7.223 4.191 1.00 23.13 C
ATOM 19 N4 C A 4 62.507 6.603 3.060 1.00 28.92 N
ATOM 20 C5 C A 4 62.924 6.502 5.418 1.00 24.42 C
ATOM 21 C6 C A 4 63.287 7.179 6.509 1.00 22.36 C
ATOM 22 P G A 5 60.086 9.673 10.378 0.50 29.24 P
ATOM 23 OP1 G A 5 59.654 9.829 11.779 0.50 29.93 O
ATOM 24 OP2 G A 5 59.549 8.569 9.545 0.50 27.69 O
ATOM 25 O5' G A 5 59.824 11.027 9.588 0.50 26.93 O
TER
ATOM 1 O3' C B 4 61.680 9.609 10.379 1.00 26.28 O
ATOM 2 P G B 5 60.086 9.673 10.378 0.50 29.24 P
ATOM 3 OP1 G B 5 59.654 9.829 11.779 0.50 29.93 O
ATOM 4 OP2 G B 5 59.549 8.569 9.545 0.50 27.69 O
ATOM 5 O5' G B 5 59.824 11.027 9.588 0.50 26.93 O
ATOM 6 C5' G B 5 59.053 10.966 8.411 0.50 28.07 C
ATOM 7 C4' G B 5 59.146 12.276 7.665 0.50 29.90 C
ATOM 8 O4' G B 5 60.317 12.286 6.805 0.50 26.93 O
ATOM 9 C3' G B 5 58.015 12.519 6.685 0.50 28.00 C
ATOM 10 O3' G B 5 56.807 12.868 7.355 0.50 29.99 O
ATOM 11 C2' G B 5 58.644 13.671 5.907 0.50 28.11 C
ATOM 12 O2' G B 5 58.745 14.869 6.652 0.50 31.44 O
ATOM 13 C1' G B 5 60.025 13.070 5.662 0.50 28.30 C
ATOM 14 N9 G B 5 59.989 12.225 4.478 0.50 27.17 N
ATOM 15 C8 G B 5 60.017 12.675 3.180 0.50 27.82 C
ATOM 16 N7 G B 5 59.952 11.721 2.300 0.50 22.11 N
ATOM 17 C5 G B 5 59.868 10.564 3.055 0.50 23.36 C
ATOM 18 C6 G B 5 59.773 9.219 2.635 0.50 23.30 C
ATOM 19 O6 G B 5 59.741 8.783 1.477 0.50 23.49 O
ATOM 20 N1 G B 5 59.705 8.344 3.716 0.50 23.72 N
ATOM 21 C2 G B 5 59.726 8.725 5.033 0.50 23.35 C
ATOM 22 N2 G B 5 59.655 7.732 5.928 0.50 28.53 N
ATOM 23 N3 G B 5 59.817 9.984 5.441 0.50 25.79 N
ATOM 24 C4 G B 5 59.882 10.853 4.403 0.50 24.66 C
ATOM 25 P G B 6 55.419 12.188 6.923 0.50 30.17 P
ATOM 26 OP1 G B 6 54.361 12.714 7.812 0.50 34.47 O
ATOM 27 OP2 G B 6 55.617 10.729 6.793 0.50 30.31 O
ATOM 28 O5' G B 6 55.192 12.788 5.469 0.50 27.47 O
TER
Atoms:
C2: (63.511,9.199,5.223)
OP1: (62.198,4.891,11.862)
OP2: (61.978,4.095,9.432)
C4: (62.860,7.223,4.191)
O5': (62.899,6.320,9.929)
C3': (62.375,9.030,9.312)
C1': (63.987,9.270,7.643)
O4': (64.481,8.359,8.608)
C5': (63.683,7.271,10.623)
P: (62.721,4.828,10.474)
O2: (63.777,10.408,5.215)
C4': (63.721,8.555,9.821)
C2': (62.857,10.057,8.294)
O2': (63.360,11.244,8.889)
N1: (63.578,8.512,6.433)
N3: (63.140,8.521,4.115)
N4: (62.507,6.603,3.060)
C6: (63.287,7.179,6.509)
C5: (62.924,6.502,5.418)
O3': (61.680,9.609,10.379)
OP1: (62.198,4.891,11.862)
OP2: (61.978,4.095,9.432)
C4: (62.860,7.223,4.191)
O5': (62.899,6.320,9.929)
C3': (62.375,9.030,9.312)
C1': (63.987,9.270,7.643)
O4': (64.481,8.359,8.608)
C5': (63.683,7.271,10.623)
P: (62.721,4.828,10.474)
O2: (63.777,10.408,5.215)
C4': (63.721,8.555,9.821)
C2': (62.857,10.057,8.294)
O2': (63.360,11.244,8.889)
N1: (63.578,8.512,6.433)
N3: (63.140,8.521,4.115)
N4: (62.507,6.603,3.060)
C6: (63.287,7.179,6.509)
C5: (62.924,6.502,5.418)
O3': (61.680,9.609,10.379)
OP1: (59.654,9.829,11.779)
OP2: (59.549,8.569,9.545)
C3': (58.015,12.519,6.685)
C1': (60.025,13.070,5.662)
C5': (59.053,10.966,8.411)
O6: (59.741,8.783,1.477)
O4': (60.317,12.286,6.805)
C8: (60.017,12.675,3.180)
C2: (59.726,8.725,5.033)
C6: (59.773,9.219,2.635)
C5: (59.868,10.564,3.055)
C4: (59.882,10.853,4.403)
P: (60.086,9.673,10.378)
C4': (59.146,12.276,7.665)
C2': (58.644,13.671,5.907)
O2': (58.745,14.869,6.652)
N1: (59.705,8.344,3.716)
N2: (59.655,7.732,5.928)
N3: (59.817,9.984,5.441)
N7: (59.952,11.721,2.300)
N9: (59.989,12.225,4.478)
O5': (59.824,11.027,9.588)
O3': (56.807,12.868,7.355)
OP2: (59.549,8.569,9.545)
C3': (58.015,12.519,6.685)
C1': (60.025,13.070,5.662)
C5': (59.053,10.966,8.411)
O6: (59.741,8.783,1.477)
O4': (60.317,12.286,6.805)
C8: (60.017,12.675,3.180)
C2: (59.726,8.725,5.033)
C6: (59.773,9.219,2.635)
C5: (59.868,10.564,3.055)
C4: (59.882,10.853,4.403)
P: (60.086,9.673,10.378)
C4': (59.146,12.276,7.665)
C2': (58.644,13.671,5.907)
O2': (58.745,14.869,6.652)
N1: (59.705,8.344,3.716)
N2: (59.655,7.732,5.928)
N3: (59.817,9.984,5.441)
N7: (59.952,11.721,2.300)
N9: (59.989,12.225,4.478)
O5': (59.824,11.027,9.588)
O3': (56.807,12.868,7.355)
Image (generated by PyMOL):