Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SJ2:B4:B5
Extra
PDB:
ATOM 1 O3' C A 3 -4.549 4.840 17.531 1.00 11.67 O
ATOM 2 P C A 4 -3.250 5.529 16.895 1.00 13.83 P
ATOM 3 OP1 C A 4 -2.624 4.515 16.015 1.00 16.34 O
ATOM 4 OP2 C A 4 -2.455 6.111 18.010 1.00 14.35 O
ATOM 5 O5' C A 4 -3.864 6.699 16.023 1.00 12.10 O
ATOM 6 C5' C A 4 -4.771 6.416 14.971 1.00 12.62 C
ATOM 7 C4' C A 4 -5.247 7.675 14.310 1.00 12.60 C
ATOM 8 O4' C A 4 -6.063 8.445 15.231 1.00 13.49 O
ATOM 9 C3' C A 4 -4.161 8.642 13.889 1.00 12.80 C
ATOM 10 O3' C A 4 -3.529 8.247 12.686 1.00 15.87 O
ATOM 11 C2' C A 4 -4.919 9.961 13.807 1.00 14.10 C
ATOM 12 O2' C A 4 -5.694 10.028 12.623 1.00 16.57 O
ATOM 13 C1' C A 4 -5.875 9.828 14.993 1.00 13.88 C
ATOM 14 N1 C A 4 -5.344 10.460 16.231 1.00 11.96 N
ATOM 15 C2 C A 4 -5.555 11.825 16.437 1.00 11.74 C
ATOM 16 O2 C A 4 -6.134 12.468 15.550 1.00 12.48 O
ATOM 17 N3 C A 4 -5.100 12.401 17.578 1.00 10.96 N
ATOM 18 C4 C A 4 -4.479 11.665 18.489 1.00 11.67 C
ATOM 19 N4 C A 4 -4.040 12.274 19.585 1.00 11.26 N
ATOM 20 C5 C A 4 -4.244 10.280 18.310 1.00 12.15 C
ATOM 21 C6 C A 4 -4.712 9.719 17.190 1.00 11.50 C
ATOM 22 P G A 5 -2.185 8.964 12.186 1.00 15.12 P
ATOM 23 OP1 G A 5 -1.655 8.146 11.069 1.00 18.20 O
ATOM 24 OP2 G A 5 -1.321 9.199 13.365 1.00 15.35 O
ATOM 25 O5' G A 5 -2.742 10.339 11.632 1.00 13.01 O
TER
ATOM 1 O3' C B 4 -3.529 8.247 12.686 1.00 15.87 O
ATOM 2 P G B 5 -2.185 8.964 12.186 1.00 15.12 P
ATOM 3 OP1 G B 5 -1.655 8.146 11.069 1.00 18.20 O
ATOM 4 OP2 G B 5 -1.321 9.199 13.365 1.00 15.35 O
ATOM 5 O5' G B 5 -2.742 10.339 11.632 1.00 13.01 O
ATOM 6 C5' G B 5 -1.960 11.511 11.630 1.00 14.38 C
ATOM 7 C4' G B 5 -2.811 12.695 11.281 1.00 13.51 C
ATOM 8 O4' G B 5 -3.845 12.862 12.286 1.00 13.21 O
ATOM 9 C3' G B 5 -2.102 14.031 11.241 1.00 11.24 C
ATOM 10 O3' G B 5 -1.435 14.255 10.018 1.00 13.60 O
ATOM 11 C2' G B 5 -3.230 15.009 11.513 1.00 12.51 C
ATOM 12 O2' G B 5 -4.034 15.200 10.357 1.00 14.56 O
ATOM 13 C1' G B 5 -4.038 14.233 12.545 1.00 12.73 C
ATOM 14 N9 G B 5 -3.585 14.521 13.917 1.00 11.05 N
ATOM 15 C8 G B 5 -3.745 15.753 14.493 1.00 10.59 C
ATOM 16 N7 G B 5 -3.278 15.822 15.701 1.00 9.93 N
ATOM 17 C5 G B 5 -2.766 14.559 15.939 1.00 10.38 C
ATOM 18 C6 G B 5 -2.139 14.057 17.101 1.00 11.36 C
ATOM 19 O6 G B 5 -1.897 14.649 18.165 1.00 11.16 O
ATOM 20 N1 G B 5 -1.763 12.733 16.928 1.00 11.42 N
ATOM 21 C2 G B 5 -1.971 11.980 15.803 1.00 12.85 C
ATOM 22 N2 G B 5 -1.510 10.721 15.871 1.00 11.91 N
ATOM 23 N3 G B 5 -2.562 12.442 14.709 1.00 12.67 N
ATOM 24 C4 G B 5 -2.942 13.730 14.846 1.00 11.62 C
ATOM 25 P G B 6 -0.012 14.993 9.993 1.00 14.57 P
ATOM 26 OP1 G B 6 0.412 15.072 8.573 1.00 17.47 O
ATOM 27 OP2 G B 6 0.863 14.315 10.964 1.00 15.53 O
ATOM 28 O5' G B 6 -0.361 16.439 10.541 1.00 12.93 O
TER
ATOM 2 P C A 4 -3.250 5.529 16.895 1.00 13.83 P
ATOM 3 OP1 C A 4 -2.624 4.515 16.015 1.00 16.34 O
ATOM 4 OP2 C A 4 -2.455 6.111 18.010 1.00 14.35 O
ATOM 5 O5' C A 4 -3.864 6.699 16.023 1.00 12.10 O
ATOM 6 C5' C A 4 -4.771 6.416 14.971 1.00 12.62 C
ATOM 7 C4' C A 4 -5.247 7.675 14.310 1.00 12.60 C
ATOM 8 O4' C A 4 -6.063 8.445 15.231 1.00 13.49 O
ATOM 9 C3' C A 4 -4.161 8.642 13.889 1.00 12.80 C
ATOM 10 O3' C A 4 -3.529 8.247 12.686 1.00 15.87 O
ATOM 11 C2' C A 4 -4.919 9.961 13.807 1.00 14.10 C
ATOM 12 O2' C A 4 -5.694 10.028 12.623 1.00 16.57 O
ATOM 13 C1' C A 4 -5.875 9.828 14.993 1.00 13.88 C
ATOM 14 N1 C A 4 -5.344 10.460 16.231 1.00 11.96 N
ATOM 15 C2 C A 4 -5.555 11.825 16.437 1.00 11.74 C
ATOM 16 O2 C A 4 -6.134 12.468 15.550 1.00 12.48 O
ATOM 17 N3 C A 4 -5.100 12.401 17.578 1.00 10.96 N
ATOM 18 C4 C A 4 -4.479 11.665 18.489 1.00 11.67 C
ATOM 19 N4 C A 4 -4.040 12.274 19.585 1.00 11.26 N
ATOM 20 C5 C A 4 -4.244 10.280 18.310 1.00 12.15 C
ATOM 21 C6 C A 4 -4.712 9.719 17.190 1.00 11.50 C
ATOM 22 P G A 5 -2.185 8.964 12.186 1.00 15.12 P
ATOM 23 OP1 G A 5 -1.655 8.146 11.069 1.00 18.20 O
ATOM 24 OP2 G A 5 -1.321 9.199 13.365 1.00 15.35 O
ATOM 25 O5' G A 5 -2.742 10.339 11.632 1.00 13.01 O
TER
ATOM 1 O3' C B 4 -3.529 8.247 12.686 1.00 15.87 O
ATOM 2 P G B 5 -2.185 8.964 12.186 1.00 15.12 P
ATOM 3 OP1 G B 5 -1.655 8.146 11.069 1.00 18.20 O
ATOM 4 OP2 G B 5 -1.321 9.199 13.365 1.00 15.35 O
ATOM 5 O5' G B 5 -2.742 10.339 11.632 1.00 13.01 O
ATOM 6 C5' G B 5 -1.960 11.511 11.630 1.00 14.38 C
ATOM 7 C4' G B 5 -2.811 12.695 11.281 1.00 13.51 C
ATOM 8 O4' G B 5 -3.845 12.862 12.286 1.00 13.21 O
ATOM 9 C3' G B 5 -2.102 14.031 11.241 1.00 11.24 C
ATOM 10 O3' G B 5 -1.435 14.255 10.018 1.00 13.60 O
ATOM 11 C2' G B 5 -3.230 15.009 11.513 1.00 12.51 C
ATOM 12 O2' G B 5 -4.034 15.200 10.357 1.00 14.56 O
ATOM 13 C1' G B 5 -4.038 14.233 12.545 1.00 12.73 C
ATOM 14 N9 G B 5 -3.585 14.521 13.917 1.00 11.05 N
ATOM 15 C8 G B 5 -3.745 15.753 14.493 1.00 10.59 C
ATOM 16 N7 G B 5 -3.278 15.822 15.701 1.00 9.93 N
ATOM 17 C5 G B 5 -2.766 14.559 15.939 1.00 10.38 C
ATOM 18 C6 G B 5 -2.139 14.057 17.101 1.00 11.36 C
ATOM 19 O6 G B 5 -1.897 14.649 18.165 1.00 11.16 O
ATOM 20 N1 G B 5 -1.763 12.733 16.928 1.00 11.42 N
ATOM 21 C2 G B 5 -1.971 11.980 15.803 1.00 12.85 C
ATOM 22 N2 G B 5 -1.510 10.721 15.871 1.00 11.91 N
ATOM 23 N3 G B 5 -2.562 12.442 14.709 1.00 12.67 N
ATOM 24 C4 G B 5 -2.942 13.730 14.846 1.00 11.62 C
ATOM 25 P G B 6 -0.012 14.993 9.993 1.00 14.57 P
ATOM 26 OP1 G B 6 0.412 15.072 8.573 1.00 17.47 O
ATOM 27 OP2 G B 6 0.863 14.315 10.964 1.00 15.53 O
ATOM 28 O5' G B 6 -0.361 16.439 10.541 1.00 12.93 O
TER
Atoms:
C2: (-5.555,11.825,16.437)
OP1: (-2.624,4.515,16.015)
OP2: (-2.455,6.111,18.010)
C4: (-4.479,11.665,18.489)
O5': (-3.864,6.699,16.023)
C3': (-4.161,8.642,13.889)
C1': (-5.875,9.828,14.993)
O4': (-6.063,8.445,15.231)
C5': (-4.771,6.416,14.971)
P: (-3.250,5.529,16.895)
O2: (-6.134,12.468,15.550)
C4': (-5.247,7.675,14.310)
C2': (-4.919,9.961,13.807)
O2': (-5.694,10.028,12.623)
N1: (-5.344,10.460,16.231)
N3: (-5.100,12.401,17.578)
N4: (-4.040,12.274,19.585)
C6: (-4.712,9.719,17.190)
C5: (-4.244,10.280,18.310)
O3': (-3.529,8.247,12.686)
OP1: (-2.624,4.515,16.015)
OP2: (-2.455,6.111,18.010)
C4: (-4.479,11.665,18.489)
O5': (-3.864,6.699,16.023)
C3': (-4.161,8.642,13.889)
C1': (-5.875,9.828,14.993)
O4': (-6.063,8.445,15.231)
C5': (-4.771,6.416,14.971)
P: (-3.250,5.529,16.895)
O2: (-6.134,12.468,15.550)
C4': (-5.247,7.675,14.310)
C2': (-4.919,9.961,13.807)
O2': (-5.694,10.028,12.623)
N1: (-5.344,10.460,16.231)
N3: (-5.100,12.401,17.578)
N4: (-4.040,12.274,19.585)
C6: (-4.712,9.719,17.190)
C5: (-4.244,10.280,18.310)
O3': (-3.529,8.247,12.686)
OP1: (-1.655,8.146,11.069)
OP2: (-1.321,9.199,13.365)
C3': (-2.102,14.031,11.241)
C1': (-4.038,14.233,12.545)
C5': (-1.960,11.511,11.630)
O6: (-1.897,14.649,18.165)
O4': (-3.845,12.862,12.286)
C8: (-3.745,15.753,14.493)
C2: (-1.971,11.980,15.803)
C6: (-2.139,14.057,17.101)
C5: (-2.766,14.559,15.939)
C4: (-2.942,13.730,14.846)
P: (-2.185,8.964,12.186)
C4': (-2.811,12.695,11.281)
C2': (-3.230,15.009,11.513)
O2': (-4.034,15.200,10.357)
N1: (-1.763,12.733,16.928)
N2: (-1.510,10.721,15.871)
N3: (-2.562,12.442,14.709)
N7: (-3.278,15.822,15.701)
N9: (-3.585,14.521,13.917)
O5': (-2.742,10.339,11.632)
O3': (-1.435,14.255,10.018)
OP2: (-1.321,9.199,13.365)
C3': (-2.102,14.031,11.241)
C1': (-4.038,14.233,12.545)
C5': (-1.960,11.511,11.630)
O6: (-1.897,14.649,18.165)
O4': (-3.845,12.862,12.286)
C8: (-3.745,15.753,14.493)
C2: (-1.971,11.980,15.803)
C6: (-2.139,14.057,17.101)
C5: (-2.766,14.559,15.939)
C4: (-2.942,13.730,14.846)
P: (-2.185,8.964,12.186)
C4': (-2.811,12.695,11.281)
C2': (-3.230,15.009,11.513)
O2': (-4.034,15.200,10.357)
N1: (-1.763,12.733,16.928)
N2: (-1.510,10.721,15.871)
N3: (-2.562,12.442,14.709)
N7: (-3.278,15.822,15.701)
N9: (-3.585,14.521,13.917)
O5': (-2.742,10.339,11.632)
O3': (-1.435,14.255,10.018)
Image (generated by PyMOL):