Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A481:A482
Extra
PDB:
ATOM 1 O3' A A 480 -31.986 19.944 106.677 1.00 32.03 O
ATOM 2 P C A 481 -33.216 19.266 105.919 1.00 25.02 P
ATOM 3 OP1 C A 481 -34.366 19.295 106.856 1.00 25.02 O
ATOM 4 OP2 C A 481 -32.755 17.956 105.393 1.00 25.02 O
ATOM 5 O5' C A 481 -33.476 20.264 104.721 1.00 25.02 O
ATOM 6 C5' C A 481 -33.313 21.651 104.898 1.00 25.02 C
ATOM 7 C4' C A 481 -32.583 22.251 103.739 1.00 25.02 C
ATOM 8 O4' C A 481 -31.214 21.779 103.703 1.00 25.02 O
ATOM 9 C3' C A 481 -33.143 21.914 102.376 1.00 25.02 C
ATOM 10 O3' C A 481 -34.242 22.743 102.058 1.00 25.02 O
ATOM 11 C2' C A 481 -31.943 22.136 101.467 1.00 25.02 C
ATOM 12 O2' C A 481 -31.844 23.497 101.097 1.00 25.02 O
ATOM 13 C1' C A 481 -30.756 21.782 102.377 1.00 25.02 C
ATOM 14 N1 C A 481 -30.201 20.457 102.060 1.00 25.60 N
ATOM 15 C2 C A 481 -29.395 20.379 100.921 1.00 25.60 C
ATOM 16 O2 C A 481 -29.188 21.430 100.282 1.00 25.60 O
ATOM 17 N3 C A 481 -28.877 19.178 100.554 1.00 25.60 N
ATOM 18 C4 C A 481 -29.154 18.090 101.272 1.00 25.60 C
ATOM 19 N4 C A 481 -28.631 16.925 100.886 1.00 25.60 N
ATOM 20 C5 C A 481 -29.971 18.148 102.436 1.00 25.60 C
ATOM 21 C6 C A 481 -30.473 19.336 102.793 1.00 25.60 C
ATOM 22 P G A 482 -35.674 22.144 101.622 1.00 28.67 P
ATOM 23 OP1 G A 482 -35.749 22.303 100.157 1.00 28.67 O
ATOM 24 OP2 G A 482 -36.714 22.797 102.460 1.00 28.67 O
ATOM 25 O5' G A 482 -35.602 20.594 102.002 1.00 28.67 O
TER
ATOM 1 O3' C B 481 -34.242 22.743 102.058 1.00 25.02 O
ATOM 2 P G B 482 -35.674 22.144 101.622 1.00 28.67 P
ATOM 3 OP1 G B 482 -35.749 22.303 100.157 1.00 28.67 O
ATOM 4 OP2 G B 482 -36.714 22.797 102.460 1.00 28.67 O
ATOM 5 O5' G B 482 -35.602 20.594 102.002 1.00 28.67 O
ATOM 6 C5' G B 482 -36.779 19.779 101.898 1.00 28.67 C
ATOM 7 C4' G B 482 -36.466 18.299 101.858 1.00 28.67 C
ATOM 8 O4' G B 482 -35.656 17.997 100.698 1.00 28.67 O
ATOM 9 C3' G B 482 -35.704 17.755 103.063 1.00 28.67 C
ATOM 10 O3' G B 482 -36.133 16.424 103.343 1.00 28.67 O
ATOM 11 C2' G B 482 -34.266 17.727 102.571 1.00 28.67 C
ATOM 12 O2' G B 482 -33.438 16.804 103.256 1.00 28.67 O
ATOM 13 C1' G B 482 -34.465 17.346 101.103 1.00 28.67 C
ATOM 14 N9 G B 482 -33.400 17.786 100.203 1.00 28.91 N
ATOM 15 C8 G B 482 -33.288 19.078 99.773 1.00 28.91 C
ATOM 16 N7 G B 482 -32.308 19.263 98.943 1.00 28.91 N
ATOM 17 C5 G B 482 -31.737 18.005 98.788 1.00 28.91 C
ATOM 18 C6 G B 482 -30.630 17.613 97.981 1.00 28.91 C
ATOM 19 O6 G B 482 -29.912 18.288 97.227 1.00 28.91 O
ATOM 20 N1 G B 482 -30.379 16.265 98.115 1.00 28.91 N
ATOM 21 C2 G B 482 -31.087 15.392 98.895 1.00 28.91 C
ATOM 22 N2 G B 482 -30.622 14.129 98.828 1.00 28.91 N
ATOM 23 N3 G B 482 -32.138 15.732 99.658 1.00 28.91 N
ATOM 24 C4 G B 482 -32.407 17.063 99.558 1.00 28.91 C
ATOM 25 P U B 483 -37.655 16.143 103.750 1.00 45.94 P
ATOM 26 OP1 U B 483 -37.771 16.387 105.203 1.00 45.94 O
ATOM 27 OP2 U B 483 -38.013 14.808 103.218 1.00 45.94 O
ATOM 28 O5' U B 483 -38.432 17.264 102.957 1.00 45.94 O
TER
ATOM 2 P C A 481 -33.216 19.266 105.919 1.00 25.02 P
ATOM 3 OP1 C A 481 -34.366 19.295 106.856 1.00 25.02 O
ATOM 4 OP2 C A 481 -32.755 17.956 105.393 1.00 25.02 O
ATOM 5 O5' C A 481 -33.476 20.264 104.721 1.00 25.02 O
ATOM 6 C5' C A 481 -33.313 21.651 104.898 1.00 25.02 C
ATOM 7 C4' C A 481 -32.583 22.251 103.739 1.00 25.02 C
ATOM 8 O4' C A 481 -31.214 21.779 103.703 1.00 25.02 O
ATOM 9 C3' C A 481 -33.143 21.914 102.376 1.00 25.02 C
ATOM 10 O3' C A 481 -34.242 22.743 102.058 1.00 25.02 O
ATOM 11 C2' C A 481 -31.943 22.136 101.467 1.00 25.02 C
ATOM 12 O2' C A 481 -31.844 23.497 101.097 1.00 25.02 O
ATOM 13 C1' C A 481 -30.756 21.782 102.377 1.00 25.02 C
ATOM 14 N1 C A 481 -30.201 20.457 102.060 1.00 25.60 N
ATOM 15 C2 C A 481 -29.395 20.379 100.921 1.00 25.60 C
ATOM 16 O2 C A 481 -29.188 21.430 100.282 1.00 25.60 O
ATOM 17 N3 C A 481 -28.877 19.178 100.554 1.00 25.60 N
ATOM 18 C4 C A 481 -29.154 18.090 101.272 1.00 25.60 C
ATOM 19 N4 C A 481 -28.631 16.925 100.886 1.00 25.60 N
ATOM 20 C5 C A 481 -29.971 18.148 102.436 1.00 25.60 C
ATOM 21 C6 C A 481 -30.473 19.336 102.793 1.00 25.60 C
ATOM 22 P G A 482 -35.674 22.144 101.622 1.00 28.67 P
ATOM 23 OP1 G A 482 -35.749 22.303 100.157 1.00 28.67 O
ATOM 24 OP2 G A 482 -36.714 22.797 102.460 1.00 28.67 O
ATOM 25 O5' G A 482 -35.602 20.594 102.002 1.00 28.67 O
TER
ATOM 1 O3' C B 481 -34.242 22.743 102.058 1.00 25.02 O
ATOM 2 P G B 482 -35.674 22.144 101.622 1.00 28.67 P
ATOM 3 OP1 G B 482 -35.749 22.303 100.157 1.00 28.67 O
ATOM 4 OP2 G B 482 -36.714 22.797 102.460 1.00 28.67 O
ATOM 5 O5' G B 482 -35.602 20.594 102.002 1.00 28.67 O
ATOM 6 C5' G B 482 -36.779 19.779 101.898 1.00 28.67 C
ATOM 7 C4' G B 482 -36.466 18.299 101.858 1.00 28.67 C
ATOM 8 O4' G B 482 -35.656 17.997 100.698 1.00 28.67 O
ATOM 9 C3' G B 482 -35.704 17.755 103.063 1.00 28.67 C
ATOM 10 O3' G B 482 -36.133 16.424 103.343 1.00 28.67 O
ATOM 11 C2' G B 482 -34.266 17.727 102.571 1.00 28.67 C
ATOM 12 O2' G B 482 -33.438 16.804 103.256 1.00 28.67 O
ATOM 13 C1' G B 482 -34.465 17.346 101.103 1.00 28.67 C
ATOM 14 N9 G B 482 -33.400 17.786 100.203 1.00 28.91 N
ATOM 15 C8 G B 482 -33.288 19.078 99.773 1.00 28.91 C
ATOM 16 N7 G B 482 -32.308 19.263 98.943 1.00 28.91 N
ATOM 17 C5 G B 482 -31.737 18.005 98.788 1.00 28.91 C
ATOM 18 C6 G B 482 -30.630 17.613 97.981 1.00 28.91 C
ATOM 19 O6 G B 482 -29.912 18.288 97.227 1.00 28.91 O
ATOM 20 N1 G B 482 -30.379 16.265 98.115 1.00 28.91 N
ATOM 21 C2 G B 482 -31.087 15.392 98.895 1.00 28.91 C
ATOM 22 N2 G B 482 -30.622 14.129 98.828 1.00 28.91 N
ATOM 23 N3 G B 482 -32.138 15.732 99.658 1.00 28.91 N
ATOM 24 C4 G B 482 -32.407 17.063 99.558 1.00 28.91 C
ATOM 25 P U B 483 -37.655 16.143 103.750 1.00 45.94 P
ATOM 26 OP1 U B 483 -37.771 16.387 105.203 1.00 45.94 O
ATOM 27 OP2 U B 483 -38.013 14.808 103.218 1.00 45.94 O
ATOM 28 O5' U B 483 -38.432 17.264 102.957 1.00 45.94 O
TER
Atoms:
C2: (-29.395,20.379,100.921)
OP1: (-34.366,19.295,106.856)
OP2: (-32.755,17.956,105.393)
C4: (-29.154,18.090,101.272)
O5': (-33.476,20.264,104.721)
C3': (-33.143,21.914,102.376)
C1': (-30.756,21.782,102.377)
O4': (-31.214,21.779,103.703)
C5': (-33.313,21.651,104.898)
P: (-33.216,19.266,105.919)
O2: (-29.188,21.430,100.282)
C4': (-32.583,22.251,103.739)
C2': (-31.943,22.136,101.467)
O2': (-31.844,23.497,101.097)
N1: (-30.201,20.457,102.060)
N3: (-28.877,19.178,100.554)
N4: (-28.631,16.925,100.886)
C6: (-30.473,19.336,102.793)
C5: (-29.971,18.148,102.436)
O3': (-34.242,22.743,102.058)
OP1: (-34.366,19.295,106.856)
OP2: (-32.755,17.956,105.393)
C4: (-29.154,18.090,101.272)
O5': (-33.476,20.264,104.721)
C3': (-33.143,21.914,102.376)
C1': (-30.756,21.782,102.377)
O4': (-31.214,21.779,103.703)
C5': (-33.313,21.651,104.898)
P: (-33.216,19.266,105.919)
O2: (-29.188,21.430,100.282)
C4': (-32.583,22.251,103.739)
C2': (-31.943,22.136,101.467)
O2': (-31.844,23.497,101.097)
N1: (-30.201,20.457,102.060)
N3: (-28.877,19.178,100.554)
N4: (-28.631,16.925,100.886)
C6: (-30.473,19.336,102.793)
C5: (-29.971,18.148,102.436)
O3': (-34.242,22.743,102.058)
OP1: (-35.749,22.303,100.157)
OP2: (-36.714,22.797,102.460)
C3': (-35.704,17.755,103.063)
C1': (-34.465,17.346,101.103)
C5': (-36.779,19.779,101.898)
O6: (-29.912,18.288,97.227)
O4': (-35.656,17.997,100.698)
C8: (-33.288,19.078,99.773)
C2: (-31.087,15.392,98.895)
C6: (-30.630,17.613,97.981)
C5: (-31.737,18.005,98.788)
C4: (-32.407,17.063,99.558)
P: (-35.674,22.144,101.622)
C4': (-36.466,18.299,101.858)
C2': (-34.266,17.727,102.571)
O2': (-33.438,16.804,103.256)
N1: (-30.379,16.265,98.115)
N2: (-30.622,14.129,98.828)
N3: (-32.138,15.732,99.658)
N7: (-32.308,19.263,98.943)
N9: (-33.400,17.786,100.203)
O5': (-35.602,20.594,102.002)
O3': (-36.133,16.424,103.343)
OP2: (-36.714,22.797,102.460)
C3': (-35.704,17.755,103.063)
C1': (-34.465,17.346,101.103)
C5': (-36.779,19.779,101.898)
O6: (-29.912,18.288,97.227)
O4': (-35.656,17.997,100.698)
C8: (-33.288,19.078,99.773)
C2: (-31.087,15.392,98.895)
C6: (-30.630,17.613,97.981)
C5: (-31.737,18.005,98.788)
C4: (-32.407,17.063,99.558)
P: (-35.674,22.144,101.622)
C4': (-36.466,18.299,101.858)
C2': (-34.266,17.727,102.571)
O2': (-33.438,16.804,103.256)
N1: (-30.379,16.265,98.115)
N2: (-30.622,14.129,98.828)
N3: (-32.138,15.732,99.658)
N7: (-32.308,19.263,98.943)
N9: (-33.400,17.786,100.203)
O5': (-35.602,20.594,102.002)
O3': (-36.133,16.424,103.343)
Image (generated by PyMOL):