Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01039:01036
Extra
PDB:
ATOM 1 O3' A A1038 34.594 111.101 106.235 1.00 39.04 O
ATOM 2 P C A1039 34.369 110.004 105.085 1.00 39.53 P
ATOM 3 OP1 C A1039 34.279 110.752 103.818 1.00 35.89 O
ATOM 4 OP2 C A1039 33.266 109.073 105.471 1.00 41.06 O
ATOM 5 O5' C A1039 35.696 109.133 105.120 1.00 41.49 O
ATOM 6 C5' C A1039 36.815 109.415 104.282 1.00 44.32 C
ATOM 7 C4' C A1039 37.900 108.415 104.570 1.00 48.96 C
ATOM 8 O4' C A1039 38.239 108.526 105.984 1.00 50.60 O
ATOM 9 C3' C A1039 37.468 106.959 104.457 1.00 52.18 C
ATOM 10 O3' C A1039 37.449 106.337 103.170 1.00 54.91 O
ATOM 11 C2' C A1039 38.516 106.286 105.324 1.00 54.11 C
ATOM 12 O2' C A1039 39.795 106.255 104.711 1.00 54.51 O
ATOM 13 C1' C A1039 38.554 107.242 106.507 1.00 52.61 C
ATOM 14 N1 C A1039 37.544 106.861 107.522 1.00 53.65 N
ATOM 15 C2 C A1039 37.930 106.019 108.586 1.00 54.60 C
ATOM 16 O2 C A1039 39.100 105.604 108.640 1.00 56.70 O
ATOM 17 N3 C A1039 37.015 105.679 109.525 1.00 53.39 N
ATOM 18 C4 C A1039 35.766 106.139 109.437 1.00 52.04 C
ATOM 19 N4 C A1039 34.905 105.798 110.399 1.00 50.96 N
ATOM 20 C5 C A1039 35.343 106.975 108.363 1.00 52.96 C
ATOM 21 C6 C A1039 36.255 107.309 107.438 1.00 52.69 C
ATOM 22 P A A1040 38.106 107.050 101.890 1.00 56.54 P
ATOM 23 OP1 A A1040 39.364 107.734 102.298 1.00 56.83 O
ATOM 24 OP2 A A1040 37.052 107.813 101.168 1.00 55.98 O
ATOM 25 O5' A A1040 38.530 105.801 100.995 1.00 50.64 O
TER
ATOM 1 O3' G B1035 26.404 103.912 112.150 1.00 41.49 O
ATOM 2 P G B1036 27.294 105.146 112.669 1.00 42.33 P
ATOM 3 OP1 G B1036 26.894 105.477 114.061 1.00 42.05 O
ATOM 4 OP2 G B1036 27.260 106.210 111.625 1.00 42.09 O
ATOM 5 O5' G B1036 28.773 104.566 112.694 1.00 40.70 O
ATOM 6 C5' G B1036 29.136 103.517 113.587 1.00 40.34 C
ATOM 7 C4' G B1036 30.583 103.143 113.384 1.00 41.50 C
ATOM 8 O4' G B1036 30.774 102.562 112.068 1.00 41.16 O
ATOM 9 C3' G B1036 31.599 104.271 113.426 1.00 41.82 C
ATOM 10 O3' G B1036 31.868 104.641 114.774 1.00 43.39 O
ATOM 11 C2' G B1036 32.791 103.616 112.742 1.00 42.87 C
ATOM 12 O2' G B1036 33.457 102.705 113.595 1.00 44.06 O
ATOM 13 C1' G B1036 32.098 102.813 111.635 1.00 42.18 C
ATOM 14 N9 G B1036 32.062 103.500 110.345 1.00 42.68 N
ATOM 15 C8 G B1036 31.095 104.360 109.869 1.00 43.07 C
ATOM 16 N7 G B1036 31.372 104.840 108.686 1.00 41.73 N
ATOM 17 C5 G B1036 32.589 104.255 108.355 1.00 43.24 C
ATOM 18 C6 G B1036 33.394 104.391 107.187 1.00 42.96 C
ATOM 19 O6 G B1036 33.183 105.074 106.183 1.00 45.43 O
ATOM 20 N1 G B1036 34.549 103.617 107.266 1.00 41.87 N
ATOM 21 C2 G B1036 34.887 102.813 108.328 1.00 42.55 C
ATOM 22 N2 G B1036 36.038 102.144 108.224 1.00 40.76 N
ATOM 23 N3 G B1036 34.147 102.674 109.418 1.00 43.87 N
ATOM 24 C4 G B1036 33.022 103.420 109.365 1.00 43.26 C
ATOM 25 P A B1037 32.774 105.934 115.105 1.00 45.21 P
ATOM 26 OP1 A B1037 34.201 105.550 114.950 1.00 43.86 O
ATOM 27 OP2 A B1037 32.283 106.452 116.421 1.00 44.36 O
ATOM 28 O5' A B1037 32.425 107.012 113.984 1.00 42.08 O
TER
ATOM 2 P C A1039 34.369 110.004 105.085 1.00 39.53 P
ATOM 3 OP1 C A1039 34.279 110.752 103.818 1.00 35.89 O
ATOM 4 OP2 C A1039 33.266 109.073 105.471 1.00 41.06 O
ATOM 5 O5' C A1039 35.696 109.133 105.120 1.00 41.49 O
ATOM 6 C5' C A1039 36.815 109.415 104.282 1.00 44.32 C
ATOM 7 C4' C A1039 37.900 108.415 104.570 1.00 48.96 C
ATOM 8 O4' C A1039 38.239 108.526 105.984 1.00 50.60 O
ATOM 9 C3' C A1039 37.468 106.959 104.457 1.00 52.18 C
ATOM 10 O3' C A1039 37.449 106.337 103.170 1.00 54.91 O
ATOM 11 C2' C A1039 38.516 106.286 105.324 1.00 54.11 C
ATOM 12 O2' C A1039 39.795 106.255 104.711 1.00 54.51 O
ATOM 13 C1' C A1039 38.554 107.242 106.507 1.00 52.61 C
ATOM 14 N1 C A1039 37.544 106.861 107.522 1.00 53.65 N
ATOM 15 C2 C A1039 37.930 106.019 108.586 1.00 54.60 C
ATOM 16 O2 C A1039 39.100 105.604 108.640 1.00 56.70 O
ATOM 17 N3 C A1039 37.015 105.679 109.525 1.00 53.39 N
ATOM 18 C4 C A1039 35.766 106.139 109.437 1.00 52.04 C
ATOM 19 N4 C A1039 34.905 105.798 110.399 1.00 50.96 N
ATOM 20 C5 C A1039 35.343 106.975 108.363 1.00 52.96 C
ATOM 21 C6 C A1039 36.255 107.309 107.438 1.00 52.69 C
ATOM 22 P A A1040 38.106 107.050 101.890 1.00 56.54 P
ATOM 23 OP1 A A1040 39.364 107.734 102.298 1.00 56.83 O
ATOM 24 OP2 A A1040 37.052 107.813 101.168 1.00 55.98 O
ATOM 25 O5' A A1040 38.530 105.801 100.995 1.00 50.64 O
TER
ATOM 1 O3' G B1035 26.404 103.912 112.150 1.00 41.49 O
ATOM 2 P G B1036 27.294 105.146 112.669 1.00 42.33 P
ATOM 3 OP1 G B1036 26.894 105.477 114.061 1.00 42.05 O
ATOM 4 OP2 G B1036 27.260 106.210 111.625 1.00 42.09 O
ATOM 5 O5' G B1036 28.773 104.566 112.694 1.00 40.70 O
ATOM 6 C5' G B1036 29.136 103.517 113.587 1.00 40.34 C
ATOM 7 C4' G B1036 30.583 103.143 113.384 1.00 41.50 C
ATOM 8 O4' G B1036 30.774 102.562 112.068 1.00 41.16 O
ATOM 9 C3' G B1036 31.599 104.271 113.426 1.00 41.82 C
ATOM 10 O3' G B1036 31.868 104.641 114.774 1.00 43.39 O
ATOM 11 C2' G B1036 32.791 103.616 112.742 1.00 42.87 C
ATOM 12 O2' G B1036 33.457 102.705 113.595 1.00 44.06 O
ATOM 13 C1' G B1036 32.098 102.813 111.635 1.00 42.18 C
ATOM 14 N9 G B1036 32.062 103.500 110.345 1.00 42.68 N
ATOM 15 C8 G B1036 31.095 104.360 109.869 1.00 43.07 C
ATOM 16 N7 G B1036 31.372 104.840 108.686 1.00 41.73 N
ATOM 17 C5 G B1036 32.589 104.255 108.355 1.00 43.24 C
ATOM 18 C6 G B1036 33.394 104.391 107.187 1.00 42.96 C
ATOM 19 O6 G B1036 33.183 105.074 106.183 1.00 45.43 O
ATOM 20 N1 G B1036 34.549 103.617 107.266 1.00 41.87 N
ATOM 21 C2 G B1036 34.887 102.813 108.328 1.00 42.55 C
ATOM 22 N2 G B1036 36.038 102.144 108.224 1.00 40.76 N
ATOM 23 N3 G B1036 34.147 102.674 109.418 1.00 43.87 N
ATOM 24 C4 G B1036 33.022 103.420 109.365 1.00 43.26 C
ATOM 25 P A B1037 32.774 105.934 115.105 1.00 45.21 P
ATOM 26 OP1 A B1037 34.201 105.550 114.950 1.00 43.86 O
ATOM 27 OP2 A B1037 32.283 106.452 116.421 1.00 44.36 O
ATOM 28 O5' A B1037 32.425 107.012 113.984 1.00 42.08 O
TER
Atoms:
C2: (37.930,106.019,108.586)
OP1: (34.279,110.752,103.818)
OP2: (33.266,109.073,105.471)
C4: (35.766,106.139,109.437)
O5': (35.696,109.133,105.120)
C3': (37.468,106.959,104.457)
C1': (38.554,107.242,106.507)
O4': (38.239,108.526,105.984)
C5': (36.815,109.415,104.282)
P: (34.369,110.004,105.085)
O2: (39.100,105.604,108.640)
C4': (37.900,108.415,104.570)
C2': (38.516,106.286,105.324)
O2': (39.795,106.255,104.711)
N1: (37.544,106.861,107.522)
N3: (37.015,105.679,109.525)
N4: (34.905,105.798,110.399)
C6: (36.255,107.309,107.438)
C5: (35.343,106.975,108.363)
O3': (37.449,106.337,103.170)
OP1: (34.279,110.752,103.818)
OP2: (33.266,109.073,105.471)
C4: (35.766,106.139,109.437)
O5': (35.696,109.133,105.120)
C3': (37.468,106.959,104.457)
C1': (38.554,107.242,106.507)
O4': (38.239,108.526,105.984)
C5': (36.815,109.415,104.282)
P: (34.369,110.004,105.085)
O2: (39.100,105.604,108.640)
C4': (37.900,108.415,104.570)
C2': (38.516,106.286,105.324)
O2': (39.795,106.255,104.711)
N1: (37.544,106.861,107.522)
N3: (37.015,105.679,109.525)
N4: (34.905,105.798,110.399)
C6: (36.255,107.309,107.438)
C5: (35.343,106.975,108.363)
O3': (37.449,106.337,103.170)
OP1: (26.894,105.477,114.061)
OP2: (27.260,106.210,111.625)
C3': (31.599,104.271,113.426)
C1': (32.098,102.813,111.635)
C5': (29.136,103.517,113.587)
O6: (33.183,105.074,106.183)
O4': (30.774,102.562,112.068)
C8: (31.095,104.360,109.869)
C2: (34.887,102.813,108.328)
C6: (33.394,104.391,107.187)
C5: (32.589,104.255,108.355)
C4: (33.022,103.420,109.365)
P: (27.294,105.146,112.669)
C4': (30.583,103.143,113.384)
C2': (32.791,103.616,112.742)
O2': (33.457,102.705,113.595)
N1: (34.549,103.617,107.266)
N2: (36.038,102.144,108.224)
N3: (34.147,102.674,109.418)
N7: (31.372,104.840,108.686)
N9: (32.062,103.500,110.345)
O5': (28.773,104.566,112.694)
O3': (31.868,104.641,114.774)
OP2: (27.260,106.210,111.625)
C3': (31.599,104.271,113.426)
C1': (32.098,102.813,111.635)
C5': (29.136,103.517,113.587)
O6: (33.183,105.074,106.183)
O4': (30.774,102.562,112.068)
C8: (31.095,104.360,109.869)
C2: (34.887,102.813,108.328)
C6: (33.394,104.391,107.187)
C5: (32.589,104.255,108.355)
C4: (33.022,103.420,109.365)
P: (27.294,105.146,112.669)
C4': (30.583,103.143,113.384)
C2': (32.791,103.616,112.742)
O2': (33.457,102.705,113.595)
N1: (34.549,103.617,107.266)
N2: (36.038,102.144,108.224)
N3: (34.147,102.674,109.418)
N7: (31.372,104.840,108.686)
N9: (32.062,103.500,110.345)
O5': (28.773,104.566,112.694)
O3': (31.868,104.641,114.774)
Image (generated by PyMOL):