Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1499:A1502
Extra
PDB:
ATOM 1 O3' A A1498 -86.951 26.230 -5.054 1.00 0.66 O
ATOM 2 P C A1499 -87.713 27.470 -4.408 1.00 2.87 P
ATOM 3 OP1 C A1499 -86.656 28.474 -4.027 1.00 2.87 O
ATOM 4 OP2 C A1499 -88.592 26.927 -3.354 1.00 2.87 O
ATOM 5 O5' C A1499 -88.588 28.022 -5.637 1.00 2.87 O
ATOM 6 C5' C A1499 -87.950 28.615 -6.758 1.00 2.87 C
ATOM 7 C4' C A1499 -88.931 29.129 -7.777 1.00 2.87 C
ATOM 8 O4' C A1499 -89.706 28.039 -8.329 1.00 2.87 O
ATOM 9 C3' C A1499 -89.971 30.123 -7.280 1.00 2.87 C
ATOM 10 O3' C A1499 -89.465 31.444 -7.210 1.00 2.87 O
ATOM 11 C2' C A1499 -91.088 29.974 -8.307 1.00 2.87 C
ATOM 12 O2' C A1499 -90.803 30.737 -9.478 1.00 2.87 O
ATOM 13 C1' C A1499 -90.995 28.492 -8.667 1.00 2.87 C
ATOM 14 N1 C A1499 -91.984 27.669 -7.954 1.00 3.12 N
ATOM 15 C2 C A1499 -93.314 27.599 -8.419 1.00 3.12 C
ATOM 16 O2 C A1499 -93.657 28.300 -9.401 1.00 3.12 O
ATOM 17 N3 C A1499 -94.216 26.802 -7.790 1.00 3.12 N
ATOM 18 C4 C A1499 -93.826 26.084 -6.746 1.00 3.12 C
ATOM 19 N4 C A1499 -94.726 25.309 -6.126 1.00 3.12 N
ATOM 20 C5 C A1499 -92.472 26.132 -6.276 1.00 3.12 C
ATOM 21 C6 C A1499 -91.589 26.926 -6.897 1.00 3.12 C
ATOM 22 P A A1500 -88.982 32.056 -5.816 1.00 17.15 P
ATOM 23 OP1 A A1500 -87.588 32.494 -6.011 1.00 17.15 O
ATOM 24 OP2 A A1500 -89.284 31.066 -4.762 1.00 17.15 O
ATOM 25 O5' A A1500 -89.923 33.312 -5.651 1.00 17.15 O
TER
ATOM 1 O3' A B1501 -89.489 31.108 1.445 1.00 5.87 O
ATOM 2 P G B1502 -89.471 29.630 0.822 1.00 2.97 P
ATOM 3 OP1 G B1502 -89.525 28.673 1.968 1.00 2.97 O
ATOM 4 OP2 G B1502 -88.334 29.566 -0.132 1.00 2.97 O
ATOM 5 O5' G B1502 -90.841 29.583 0.021 1.00 2.97 O
ATOM 6 C5' G B1502 -92.048 29.162 0.641 1.00 2.97 C
ATOM 7 C4' G B1502 -92.652 28.020 -0.114 1.00 2.97 C
ATOM 8 O4' G B1502 -93.279 28.517 -1.330 1.00 2.97 O
ATOM 9 C3' G B1502 -91.648 26.970 -0.577 1.00 2.97 C
ATOM 10 O3' G B1502 -92.217 25.676 -0.446 1.00 2.97 O
ATOM 11 C2' G B1502 -91.460 27.302 -2.050 1.00 2.97 C
ATOM 12 O2' G B1502 -91.033 26.227 -2.843 1.00 2.97 O
ATOM 13 C1' G B1502 -92.852 27.719 -2.408 1.00 2.97 C
ATOM 14 N9 G B1502 -92.953 28.458 -3.656 1.00 3.12 N
ATOM 15 C8 G B1502 -92.005 29.159 -4.357 1.00 3.12 C
ATOM 16 N7 G B1502 -92.469 29.630 -5.499 1.00 3.12 N
ATOM 17 C5 G B1502 -93.796 29.180 -5.547 1.00 3.12 C
ATOM 18 C6 G B1502 -94.833 29.353 -6.518 1.00 3.12 C
ATOM 19 O6 G B1502 -94.825 29.957 -7.604 1.00 3.12 O
ATOM 20 N1 G B1502 -95.992 28.713 -6.144 1.00 3.12 N
ATOM 21 C2 G B1502 -96.130 27.997 -5.002 1.00 3.12 C
ATOM 22 N2 G B1502 -97.336 27.452 -4.841 1.00 3.12 N
ATOM 23 N3 G B1502 -95.212 27.818 -4.080 1.00 3.12 N
ATOM 24 C4 G B1502 -94.080 28.433 -4.425 1.00 3.12 C
ATOM 25 P G B1503 -91.663 24.699 0.684 1.00 12.46 P
ATOM 26 OP1 G B1503 -90.347 24.168 0.196 1.00 12.46 O
ATOM 27 OP2 G B1503 -92.743 23.743 1.004 1.00 12.46 O
ATOM 28 O5' G B1503 -91.437 25.694 1.906 1.00 12.46 O
TER
ATOM 2 P C A1499 -87.713 27.470 -4.408 1.00 2.87 P
ATOM 3 OP1 C A1499 -86.656 28.474 -4.027 1.00 2.87 O
ATOM 4 OP2 C A1499 -88.592 26.927 -3.354 1.00 2.87 O
ATOM 5 O5' C A1499 -88.588 28.022 -5.637 1.00 2.87 O
ATOM 6 C5' C A1499 -87.950 28.615 -6.758 1.00 2.87 C
ATOM 7 C4' C A1499 -88.931 29.129 -7.777 1.00 2.87 C
ATOM 8 O4' C A1499 -89.706 28.039 -8.329 1.00 2.87 O
ATOM 9 C3' C A1499 -89.971 30.123 -7.280 1.00 2.87 C
ATOM 10 O3' C A1499 -89.465 31.444 -7.210 1.00 2.87 O
ATOM 11 C2' C A1499 -91.088 29.974 -8.307 1.00 2.87 C
ATOM 12 O2' C A1499 -90.803 30.737 -9.478 1.00 2.87 O
ATOM 13 C1' C A1499 -90.995 28.492 -8.667 1.00 2.87 C
ATOM 14 N1 C A1499 -91.984 27.669 -7.954 1.00 3.12 N
ATOM 15 C2 C A1499 -93.314 27.599 -8.419 1.00 3.12 C
ATOM 16 O2 C A1499 -93.657 28.300 -9.401 1.00 3.12 O
ATOM 17 N3 C A1499 -94.216 26.802 -7.790 1.00 3.12 N
ATOM 18 C4 C A1499 -93.826 26.084 -6.746 1.00 3.12 C
ATOM 19 N4 C A1499 -94.726 25.309 -6.126 1.00 3.12 N
ATOM 20 C5 C A1499 -92.472 26.132 -6.276 1.00 3.12 C
ATOM 21 C6 C A1499 -91.589 26.926 -6.897 1.00 3.12 C
ATOM 22 P A A1500 -88.982 32.056 -5.816 1.00 17.15 P
ATOM 23 OP1 A A1500 -87.588 32.494 -6.011 1.00 17.15 O
ATOM 24 OP2 A A1500 -89.284 31.066 -4.762 1.00 17.15 O
ATOM 25 O5' A A1500 -89.923 33.312 -5.651 1.00 17.15 O
TER
ATOM 1 O3' A B1501 -89.489 31.108 1.445 1.00 5.87 O
ATOM 2 P G B1502 -89.471 29.630 0.822 1.00 2.97 P
ATOM 3 OP1 G B1502 -89.525 28.673 1.968 1.00 2.97 O
ATOM 4 OP2 G B1502 -88.334 29.566 -0.132 1.00 2.97 O
ATOM 5 O5' G B1502 -90.841 29.583 0.021 1.00 2.97 O
ATOM 6 C5' G B1502 -92.048 29.162 0.641 1.00 2.97 C
ATOM 7 C4' G B1502 -92.652 28.020 -0.114 1.00 2.97 C
ATOM 8 O4' G B1502 -93.279 28.517 -1.330 1.00 2.97 O
ATOM 9 C3' G B1502 -91.648 26.970 -0.577 1.00 2.97 C
ATOM 10 O3' G B1502 -92.217 25.676 -0.446 1.00 2.97 O
ATOM 11 C2' G B1502 -91.460 27.302 -2.050 1.00 2.97 C
ATOM 12 O2' G B1502 -91.033 26.227 -2.843 1.00 2.97 O
ATOM 13 C1' G B1502 -92.852 27.719 -2.408 1.00 2.97 C
ATOM 14 N9 G B1502 -92.953 28.458 -3.656 1.00 3.12 N
ATOM 15 C8 G B1502 -92.005 29.159 -4.357 1.00 3.12 C
ATOM 16 N7 G B1502 -92.469 29.630 -5.499 1.00 3.12 N
ATOM 17 C5 G B1502 -93.796 29.180 -5.547 1.00 3.12 C
ATOM 18 C6 G B1502 -94.833 29.353 -6.518 1.00 3.12 C
ATOM 19 O6 G B1502 -94.825 29.957 -7.604 1.00 3.12 O
ATOM 20 N1 G B1502 -95.992 28.713 -6.144 1.00 3.12 N
ATOM 21 C2 G B1502 -96.130 27.997 -5.002 1.00 3.12 C
ATOM 22 N2 G B1502 -97.336 27.452 -4.841 1.00 3.12 N
ATOM 23 N3 G B1502 -95.212 27.818 -4.080 1.00 3.12 N
ATOM 24 C4 G B1502 -94.080 28.433 -4.425 1.00 3.12 C
ATOM 25 P G B1503 -91.663 24.699 0.684 1.00 12.46 P
ATOM 26 OP1 G B1503 -90.347 24.168 0.196 1.00 12.46 O
ATOM 27 OP2 G B1503 -92.743 23.743 1.004 1.00 12.46 O
ATOM 28 O5' G B1503 -91.437 25.694 1.906 1.00 12.46 O
TER
Atoms:
C2: (-93.314,27.599,-8.419)
OP1: (-86.656,28.474,-4.027)
OP2: (-88.592,26.927,-3.354)
C4: (-93.826,26.084,-6.746)
O5': (-88.588,28.022,-5.637)
C3': (-89.971,30.123,-7.280)
C1': (-90.995,28.492,-8.667)
O4': (-89.706,28.039,-8.329)
C5': (-87.950,28.615,-6.758)
P: (-87.713,27.470,-4.408)
O2: (-93.657,28.300,-9.401)
C4': (-88.931,29.129,-7.777)
C2': (-91.088,29.974,-8.307)
O2': (-90.803,30.737,-9.478)
N1: (-91.984,27.669,-7.954)
N3: (-94.216,26.802,-7.790)
N4: (-94.726,25.309,-6.126)
C6: (-91.589,26.926,-6.897)
C5: (-92.472,26.132,-6.276)
O3': (-89.465,31.444,-7.210)
OP1: (-86.656,28.474,-4.027)
OP2: (-88.592,26.927,-3.354)
C4: (-93.826,26.084,-6.746)
O5': (-88.588,28.022,-5.637)
C3': (-89.971,30.123,-7.280)
C1': (-90.995,28.492,-8.667)
O4': (-89.706,28.039,-8.329)
C5': (-87.950,28.615,-6.758)
P: (-87.713,27.470,-4.408)
O2: (-93.657,28.300,-9.401)
C4': (-88.931,29.129,-7.777)
C2': (-91.088,29.974,-8.307)
O2': (-90.803,30.737,-9.478)
N1: (-91.984,27.669,-7.954)
N3: (-94.216,26.802,-7.790)
N4: (-94.726,25.309,-6.126)
C6: (-91.589,26.926,-6.897)
C5: (-92.472,26.132,-6.276)
O3': (-89.465,31.444,-7.210)
OP1: (-89.525,28.673,1.968)
OP2: (-88.334,29.566,-0.132)
C3': (-91.648,26.970,-0.577)
C1': (-92.852,27.719,-2.408)
C5': (-92.048,29.162,0.641)
O6: (-94.825,29.957,-7.604)
O4': (-93.279,28.517,-1.330)
C8: (-92.005,29.159,-4.357)
C2: (-96.130,27.997,-5.002)
C6: (-94.833,29.353,-6.518)
C5: (-93.796,29.180,-5.547)
C4: (-94.080,28.433,-4.425)
P: (-89.471,29.630,0.822)
C4': (-92.652,28.020,-0.114)
C2': (-91.460,27.302,-2.050)
O2': (-91.033,26.227,-2.843)
N1: (-95.992,28.713,-6.144)
N2: (-97.336,27.452,-4.841)
N3: (-95.212,27.818,-4.080)
N7: (-92.469,29.630,-5.499)
N9: (-92.953,28.458,-3.656)
O5': (-90.841,29.583,0.021)
O3': (-92.217,25.676,-0.446)
OP2: (-88.334,29.566,-0.132)
C3': (-91.648,26.970,-0.577)
C1': (-92.852,27.719,-2.408)
C5': (-92.048,29.162,0.641)
O6: (-94.825,29.957,-7.604)
O4': (-93.279,28.517,-1.330)
C8: (-92.005,29.159,-4.357)
C2: (-96.130,27.997,-5.002)
C6: (-94.833,29.353,-6.518)
C5: (-93.796,29.180,-5.547)
C4: (-94.080,28.433,-4.425)
P: (-89.471,29.630,0.822)
C4': (-92.652,28.020,-0.114)
C2': (-91.460,27.302,-2.050)
O2': (-91.033,26.227,-2.843)
N1: (-95.992,28.713,-6.144)
N2: (-97.336,27.452,-4.841)
N3: (-95.212,27.818,-4.080)
N7: (-92.469,29.630,-5.499)
N9: (-92.953,28.458,-3.656)
O5': (-90.841,29.583,0.021)
O3': (-92.217,25.676,-0.446)
Image (generated by PyMOL):