Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A516:A528
Extra
PDB:
ATOM 1 O3' G A 515 -114.429 13.775 -36.604 1.00 37.16 O
ATOM 2 P C A 516 -113.704 12.798 -35.556 1.00 30.96 P
ATOM 3 OP1 C A 516 -114.420 11.493 -35.597 1.00 30.96 O
ATOM 4 OP2 C A 516 -113.632 13.534 -34.266 1.00 30.96 O
ATOM 5 O5' C A 516 -112.235 12.625 -36.173 1.00 30.96 O
ATOM 6 C5' C A 516 -111.309 13.711 -36.196 1.00 30.96 C
ATOM 7 C4' C A 516 -109.957 13.302 -35.671 1.00 30.96 C
ATOM 8 O4' C A 516 -109.051 14.436 -35.744 1.00 30.96 O
ATOM 9 C3' C A 516 -109.941 12.863 -34.215 1.00 30.96 C
ATOM 10 O3' C A 516 -108.922 11.898 -34.031 1.00 30.96 O
ATOM 11 C2' C A 516 -109.551 14.133 -33.498 1.00 30.96 C
ATOM 12 O2' C A 516 -109.010 13.934 -32.221 1.00 30.96 O
ATOM 13 C1' C A 516 -108.526 14.689 -34.459 1.00 30.96 C
ATOM 14 N1 C A 516 -108.295 16.129 -34.320 1.00 31.09 N
ATOM 15 C2 C A 516 -107.329 16.548 -33.406 1.00 31.09 C
ATOM 16 O2 C A 516 -106.719 15.683 -32.753 1.00 31.09 O
ATOM 17 N3 C A 516 -107.092 17.870 -33.245 1.00 31.09 N
ATOM 18 C4 C A 516 -107.783 18.741 -33.970 1.00 31.09 C
ATOM 19 N4 C A 516 -107.530 20.035 -33.801 1.00 31.09 N
ATOM 20 C5 C A 516 -108.768 18.336 -34.910 1.00 31.09 C
ATOM 21 C6 C A 516 -108.996 17.029 -35.052 1.00 31.09 C
ATOM 22 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 23 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 24 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 25 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
TER
ATOM 1 O3' G B 527 -111.442 19.421 -38.304 1.00 26.01 O
ATOM 2 P G B 528 -111.972 20.351 -37.103 1.00 26.91 P
ATOM 3 OP1 G B 528 -112.650 21.535 -37.698 1.00 26.91 O
ATOM 4 OP2 G B 528 -110.833 20.581 -36.198 1.00 26.91 O
ATOM 5 O5' G B 528 -113.035 19.403 -36.407 1.00 26.91 O
ATOM 6 C5' G B 528 -113.046 18.003 -36.665 1.00 26.91 C
ATOM 7 C4' G B 528 -113.486 17.227 -35.449 1.00 26.91 C
ATOM 8 O4' G B 528 -112.342 16.845 -34.678 1.00 26.91 O
ATOM 9 C3' G B 528 -114.369 17.987 -34.475 1.00 26.91 C
ATOM 10 O3' G B 528 -115.732 17.874 -34.803 1.00 26.91 O
ATOM 11 C2' G B 528 -114.039 17.407 -33.101 1.00 26.91 C
ATOM 12 O2' G B 528 -115.022 16.462 -32.709 1.00 26.91 O
ATOM 13 C1' G B 528 -112.716 16.680 -33.334 1.00 26.91 C
ATOM 14 N9 G B 528 -111.615 17.146 -32.461 1.00 27.26 N
ATOM 15 C8 G B 528 -110.848 16.270 -31.712 1.00 27.26 C
ATOM 16 N7 G B 528 -109.885 16.817 -31.040 1.00 27.26 N
ATOM 17 C5 G B 528 -110.018 18.143 -31.377 1.00 27.26 C
ATOM 18 C6 G B 528 -109.228 19.204 -30.926 1.00 27.26 C
ATOM 19 O6 G B 528 -108.269 19.156 -30.148 1.00 27.26 O
ATOM 20 N1 G B 528 -109.664 20.398 -31.472 1.00 27.26 N
ATOM 21 C2 G B 528 -110.728 20.548 -32.352 1.00 27.26 C
ATOM 22 N2 G B 528 -110.957 21.835 -32.752 1.00 27.26 N
ATOM 23 N3 G B 528 -111.490 19.535 -32.784 1.00 27.26 N
ATOM 24 C4 G B 528 -111.068 18.379 -32.251 1.00 27.26 C
ATOM 25 P U B 529 -116.669 19.174 -34.780 1.00 63.52 P
ATOM 26 OP1 U B 529 -115.829 20.329 -34.354 1.00 63.52 O
ATOM 27 OP2 U B 529 -117.867 18.826 -33.973 1.00 63.52 O
ATOM 28 O5' U B 529 -117.072 19.334 -36.313 1.00 63.52 O
TER
ATOM 2 P C A 516 -113.704 12.798 -35.556 1.00 30.96 P
ATOM 3 OP1 C A 516 -114.420 11.493 -35.597 1.00 30.96 O
ATOM 4 OP2 C A 516 -113.632 13.534 -34.266 1.00 30.96 O
ATOM 5 O5' C A 516 -112.235 12.625 -36.173 1.00 30.96 O
ATOM 6 C5' C A 516 -111.309 13.711 -36.196 1.00 30.96 C
ATOM 7 C4' C A 516 -109.957 13.302 -35.671 1.00 30.96 C
ATOM 8 O4' C A 516 -109.051 14.436 -35.744 1.00 30.96 O
ATOM 9 C3' C A 516 -109.941 12.863 -34.215 1.00 30.96 C
ATOM 10 O3' C A 516 -108.922 11.898 -34.031 1.00 30.96 O
ATOM 11 C2' C A 516 -109.551 14.133 -33.498 1.00 30.96 C
ATOM 12 O2' C A 516 -109.010 13.934 -32.221 1.00 30.96 O
ATOM 13 C1' C A 516 -108.526 14.689 -34.459 1.00 30.96 C
ATOM 14 N1 C A 516 -108.295 16.129 -34.320 1.00 31.09 N
ATOM 15 C2 C A 516 -107.329 16.548 -33.406 1.00 31.09 C
ATOM 16 O2 C A 516 -106.719 15.683 -32.753 1.00 31.09 O
ATOM 17 N3 C A 516 -107.092 17.870 -33.245 1.00 31.09 N
ATOM 18 C4 C A 516 -107.783 18.741 -33.970 1.00 31.09 C
ATOM 19 N4 C A 516 -107.530 20.035 -33.801 1.00 31.09 N
ATOM 20 C5 C A 516 -108.768 18.336 -34.910 1.00 31.09 C
ATOM 21 C6 C A 516 -108.996 17.029 -35.052 1.00 31.09 C
ATOM 22 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 23 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 24 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 25 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
TER
ATOM 1 O3' G B 527 -111.442 19.421 -38.304 1.00 26.01 O
ATOM 2 P G B 528 -111.972 20.351 -37.103 1.00 26.91 P
ATOM 3 OP1 G B 528 -112.650 21.535 -37.698 1.00 26.91 O
ATOM 4 OP2 G B 528 -110.833 20.581 -36.198 1.00 26.91 O
ATOM 5 O5' G B 528 -113.035 19.403 -36.407 1.00 26.91 O
ATOM 6 C5' G B 528 -113.046 18.003 -36.665 1.00 26.91 C
ATOM 7 C4' G B 528 -113.486 17.227 -35.449 1.00 26.91 C
ATOM 8 O4' G B 528 -112.342 16.845 -34.678 1.00 26.91 O
ATOM 9 C3' G B 528 -114.369 17.987 -34.475 1.00 26.91 C
ATOM 10 O3' G B 528 -115.732 17.874 -34.803 1.00 26.91 O
ATOM 11 C2' G B 528 -114.039 17.407 -33.101 1.00 26.91 C
ATOM 12 O2' G B 528 -115.022 16.462 -32.709 1.00 26.91 O
ATOM 13 C1' G B 528 -112.716 16.680 -33.334 1.00 26.91 C
ATOM 14 N9 G B 528 -111.615 17.146 -32.461 1.00 27.26 N
ATOM 15 C8 G B 528 -110.848 16.270 -31.712 1.00 27.26 C
ATOM 16 N7 G B 528 -109.885 16.817 -31.040 1.00 27.26 N
ATOM 17 C5 G B 528 -110.018 18.143 -31.377 1.00 27.26 C
ATOM 18 C6 G B 528 -109.228 19.204 -30.926 1.00 27.26 C
ATOM 19 O6 G B 528 -108.269 19.156 -30.148 1.00 27.26 O
ATOM 20 N1 G B 528 -109.664 20.398 -31.472 1.00 27.26 N
ATOM 21 C2 G B 528 -110.728 20.548 -32.352 1.00 27.26 C
ATOM 22 N2 G B 528 -110.957 21.835 -32.752 1.00 27.26 N
ATOM 23 N3 G B 528 -111.490 19.535 -32.784 1.00 27.26 N
ATOM 24 C4 G B 528 -111.068 18.379 -32.251 1.00 27.26 C
ATOM 25 P U B 529 -116.669 19.174 -34.780 1.00 63.52 P
ATOM 26 OP1 U B 529 -115.829 20.329 -34.354 1.00 63.52 O
ATOM 27 OP2 U B 529 -117.867 18.826 -33.973 1.00 63.52 O
ATOM 28 O5' U B 529 -117.072 19.334 -36.313 1.00 63.52 O
TER
Atoms:
C2: (-107.329,16.548,-33.406)
OP1: (-114.420,11.493,-35.597)
OP2: (-113.632,13.534,-34.266)
C4: (-107.783,18.741,-33.970)
O5': (-112.235,12.625,-36.173)
C3': (-109.941,12.863,-34.215)
C1': (-108.526,14.689,-34.459)
O4': (-109.051,14.436,-35.744)
C5': (-111.309,13.711,-36.196)
P: (-113.704,12.798,-35.556)
O2: (-106.719,15.683,-32.753)
C4': (-109.957,13.302,-35.671)
C2': (-109.551,14.133,-33.498)
O2': (-109.010,13.934,-32.221)
N1: (-108.295,16.129,-34.320)
N3: (-107.092,17.870,-33.245)
N4: (-107.530,20.035,-33.801)
C6: (-108.996,17.029,-35.052)
C5: (-108.768,18.336,-34.910)
O3': (-108.922,11.898,-34.031)
OP1: (-114.420,11.493,-35.597)
OP2: (-113.632,13.534,-34.266)
C4: (-107.783,18.741,-33.970)
O5': (-112.235,12.625,-36.173)
C3': (-109.941,12.863,-34.215)
C1': (-108.526,14.689,-34.459)
O4': (-109.051,14.436,-35.744)
C5': (-111.309,13.711,-36.196)
P: (-113.704,12.798,-35.556)
O2: (-106.719,15.683,-32.753)
C4': (-109.957,13.302,-35.671)
C2': (-109.551,14.133,-33.498)
O2': (-109.010,13.934,-32.221)
N1: (-108.295,16.129,-34.320)
N3: (-107.092,17.870,-33.245)
N4: (-107.530,20.035,-33.801)
C6: (-108.996,17.029,-35.052)
C5: (-108.768,18.336,-34.910)
O3': (-108.922,11.898,-34.031)
OP1: (-112.650,21.535,-37.698)
OP2: (-110.833,20.581,-36.198)
C3': (-114.369,17.987,-34.475)
C1': (-112.716,16.680,-33.334)
C5': (-113.046,18.003,-36.665)
O6: (-108.269,19.156,-30.148)
O4': (-112.342,16.845,-34.678)
C8: (-110.848,16.270,-31.712)
C2: (-110.728,20.548,-32.352)
C6: (-109.228,19.204,-30.926)
C5: (-110.018,18.143,-31.377)
C4: (-111.068,18.379,-32.251)
P: (-111.972,20.351,-37.103)
C4': (-113.486,17.227,-35.449)
C2': (-114.039,17.407,-33.101)
O2': (-115.022,16.462,-32.709)
N1: (-109.664,20.398,-31.472)
N2: (-110.957,21.835,-32.752)
N3: (-111.490,19.535,-32.784)
N7: (-109.885,16.817,-31.040)
N9: (-111.615,17.146,-32.461)
O5': (-113.035,19.403,-36.407)
O3': (-115.732,17.874,-34.803)
OP2: (-110.833,20.581,-36.198)
C3': (-114.369,17.987,-34.475)
C1': (-112.716,16.680,-33.334)
C5': (-113.046,18.003,-36.665)
O6: (-108.269,19.156,-30.148)
O4': (-112.342,16.845,-34.678)
C8: (-110.848,16.270,-31.712)
C2: (-110.728,20.548,-32.352)
C6: (-109.228,19.204,-30.926)
C5: (-110.018,18.143,-31.377)
C4: (-111.068,18.379,-32.251)
P: (-111.972,20.351,-37.103)
C4': (-113.486,17.227,-35.449)
C2': (-114.039,17.407,-33.101)
O2': (-115.022,16.462,-32.709)
N1: (-109.664,20.398,-31.472)
N2: (-110.957,21.835,-32.752)
N3: (-111.490,19.535,-32.784)
N7: (-109.885,16.817,-31.040)
N9: (-111.615,17.146,-32.461)
O5': (-113.035,19.403,-36.407)
O3': (-115.732,17.874,-34.803)
Image (generated by PyMOL):