Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2494:A2439
Extra
PDB:
ATOM 1 O3' U A2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C A2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C A2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C A2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C A2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C A2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C A2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C A2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C A2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C A2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C A2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C A2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C A2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C A2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C A2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C A2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C A2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 1 O3' G B2438 -79.748 -65.897 18.531 1.00 0.01 O
ATOM 2 P G B2439 -79.640 -66.484 17.076 1.00 0.01 P
ATOM 3 OP1 G B2439 -79.740 -67.933 17.162 1.00 0.01 O
ATOM 4 OP2 G B2439 -78.460 -65.923 16.485 1.00 0.01 O
ATOM 5 O5' G B2439 -80.905 -65.883 16.380 1.00 0.01 O
ATOM 6 C5' G B2439 -82.198 -66.104 16.854 1.00 0.01 C
ATOM 7 C4' G B2439 -83.147 -65.318 16.030 1.00 0.01 C
ATOM 8 O4' G B2439 -82.863 -63.917 16.224 1.00 0.01 O
ATOM 9 C3' G B2439 -83.012 -65.511 14.541 1.00 0.01 C
ATOM 10 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 11 C2' G B2439 -83.518 -64.177 13.975 1.00 0.01 C
ATOM 12 O2' G B2439 -84.930 -64.123 13.891 1.00 0.01 O
ATOM 13 C1' G B2439 -83.060 -63.196 15.042 1.00 0.01 C
ATOM 14 N9 G B2439 -81.801 -62.582 14.666 1.00 0.01 N
ATOM 15 C8 G B2439 -80.576 -63.107 14.883 1.00 0.01 C
ATOM 16 N7 G B2439 -79.635 -62.390 14.380 1.00 0.01 N
ATOM 17 C5 G B2439 -80.292 -61.351 13.755 1.00 0.01 C
ATOM 18 C6 G B2439 -79.789 -60.252 13.020 1.00 0.01 C
ATOM 19 O6 G B2439 -78.623 -59.967 12.760 1.00 0.01 O
ATOM 20 N1 G B2439 -80.796 -59.418 12.587 1.00 0.01 N
ATOM 21 C2 G B2439 -82.108 -59.623 12.822 1.00 0.01 C
ATOM 22 N2 G B2439 -82.878 -58.698 12.289 1.00 0.01 N
ATOM 23 N3 G B2439 -82.613 -60.633 13.497 1.00 0.01 N
ATOM 24 C4 G B2439 -81.644 -61.455 13.932 1.00 0.01 C
ATOM 25 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 26 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 27 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 28 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
TER
ATOM 2 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C A2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C A2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C A2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C A2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C A2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C A2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C A2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C A2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C A2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C A2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C A2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C A2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C A2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C A2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C A2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C A2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 1 O3' G B2438 -79.748 -65.897 18.531 1.00 0.01 O
ATOM 2 P G B2439 -79.640 -66.484 17.076 1.00 0.01 P
ATOM 3 OP1 G B2439 -79.740 -67.933 17.162 1.00 0.01 O
ATOM 4 OP2 G B2439 -78.460 -65.923 16.485 1.00 0.01 O
ATOM 5 O5' G B2439 -80.905 -65.883 16.380 1.00 0.01 O
ATOM 6 C5' G B2439 -82.198 -66.104 16.854 1.00 0.01 C
ATOM 7 C4' G B2439 -83.147 -65.318 16.030 1.00 0.01 C
ATOM 8 O4' G B2439 -82.863 -63.917 16.224 1.00 0.01 O
ATOM 9 C3' G B2439 -83.012 -65.511 14.541 1.00 0.01 C
ATOM 10 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 11 C2' G B2439 -83.518 -64.177 13.975 1.00 0.01 C
ATOM 12 O2' G B2439 -84.930 -64.123 13.891 1.00 0.01 O
ATOM 13 C1' G B2439 -83.060 -63.196 15.042 1.00 0.01 C
ATOM 14 N9 G B2439 -81.801 -62.582 14.666 1.00 0.01 N
ATOM 15 C8 G B2439 -80.576 -63.107 14.883 1.00 0.01 C
ATOM 16 N7 G B2439 -79.635 -62.390 14.380 1.00 0.01 N
ATOM 17 C5 G B2439 -80.292 -61.351 13.755 1.00 0.01 C
ATOM 18 C6 G B2439 -79.789 -60.252 13.020 1.00 0.01 C
ATOM 19 O6 G B2439 -78.623 -59.967 12.760 1.00 0.01 O
ATOM 20 N1 G B2439 -80.796 -59.418 12.587 1.00 0.01 N
ATOM 21 C2 G B2439 -82.108 -59.623 12.822 1.00 0.01 C
ATOM 22 N2 G B2439 -82.878 -58.698 12.289 1.00 0.01 N
ATOM 23 N3 G B2439 -82.613 -60.633 13.497 1.00 0.01 N
ATOM 24 C4 G B2439 -81.644 -61.455 13.932 1.00 0.01 C
ATOM 25 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 26 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 27 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 28 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
TER
Atoms:
C2: (-80.423,-60.619,8.840)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
OP1: (-79.740,-67.933,17.162)
OP2: (-78.460,-65.923,16.485)
C3': (-83.012,-65.511,14.541)
C1': (-83.060,-63.196,15.042)
C5': (-82.198,-66.104,16.854)
O6: (-78.623,-59.967,12.760)
O4': (-82.863,-63.917,16.224)
C8: (-80.576,-63.107,14.883)
C2: (-82.108,-59.623,12.822)
C6: (-79.789,-60.252,13.020)
C5: (-80.292,-61.351,13.755)
C4: (-81.644,-61.455,13.932)
P: (-79.640,-66.484,17.076)
C4': (-83.147,-65.318,16.030)
C2': (-83.518,-64.177,13.975)
O2': (-84.930,-64.123,13.891)
N1: (-80.796,-59.418,12.587)
N2: (-82.878,-58.698,12.289)
N3: (-82.613,-60.633,13.497)
N7: (-79.635,-62.390,14.380)
N9: (-81.801,-62.582,14.666)
O5': (-80.905,-65.883,16.380)
O3': (-83.701,-66.651,14.070)
OP2: (-78.460,-65.923,16.485)
C3': (-83.012,-65.511,14.541)
C1': (-83.060,-63.196,15.042)
C5': (-82.198,-66.104,16.854)
O6: (-78.623,-59.967,12.760)
O4': (-82.863,-63.917,16.224)
C8: (-80.576,-63.107,14.883)
C2: (-82.108,-59.623,12.822)
C6: (-79.789,-60.252,13.020)
C5: (-80.292,-61.351,13.755)
C4: (-81.644,-61.455,13.932)
P: (-79.640,-66.484,17.076)
C4': (-83.147,-65.318,16.030)
C2': (-83.518,-64.177,13.975)
O2': (-84.930,-64.123,13.891)
N1: (-80.796,-59.418,12.587)
N2: (-82.878,-58.698,12.289)
N3: (-82.613,-60.633,13.497)
N7: (-79.635,-62.390,14.380)
N9: (-81.801,-62.582,14.666)
O5': (-80.905,-65.883,16.380)
O3': (-83.701,-66.651,14.070)
Image (generated by PyMOL):