Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RFK:F4:F5
Extra
PDB:
ATOM 1 O3' G A 3 3.723 46.919 83.985 1.00 61.26 O
ATOM 2 P C A 4 3.106 46.789 82.505 1.00 59.09 P
ATOM 3 OP1 C A 4 4.223 47.117 81.572 1.00 57.51 O
ATOM 4 OP2 C A 4 1.845 47.575 82.447 1.00 57.86 O
ATOM 5 O5' C A 4 2.756 45.215 82.385 1.00 56.18 O
ATOM 6 C5' C A 4 3.850 44.295 82.378 1.00 53.88 C
ATOM 7 C4' C A 4 3.449 42.842 82.291 1.00 52.14 C
ATOM 8 O4' C A 4 2.698 42.440 83.461 1.00 51.40 O
ATOM 9 C3' C A 4 2.535 42.476 81.136 1.00 52.05 C
ATOM 10 O3' C A 4 3.321 42.308 79.987 1.00 52.58 O
ATOM 11 C2' C A 4 1.990 41.146 81.634 1.00 50.70 C
ATOM 12 O2' C A 4 2.956 40.113 81.575 1.00 50.77 O
ATOM 13 C1' C A 4 1.709 41.497 83.087 1.00 49.35 C
ATOM 14 N1 C A 4 0.366 42.098 83.344 1.00 48.43 N
ATOM 15 C2 C A 4 -0.738 41.266 83.611 1.00 48.56 C
ATOM 16 O2 C A 4 -0.627 40.029 83.620 1.00 49.52 O
ATOM 17 N3 C A 4 -1.938 41.849 83.860 1.00 48.14 N
ATOM 18 C4 C A 4 -2.059 43.182 83.840 1.00 48.70 C
ATOM 19 N4 C A 4 -3.269 43.683 84.094 1.00 48.83 N
ATOM 20 C5 C A 4 -0.958 44.060 83.576 1.00 48.37 C
ATOM 21 C6 C A 4 0.221 43.469 83.341 1.00 48.46 C
ATOM 22 P G A 5 2.893 42.906 78.566 1.00 53.09 P
ATOM 23 OP1 G A 5 1.667 42.164 78.133 1.00 48.26 O
ATOM 24 OP2 G A 5 4.153 42.979 77.756 1.00 51.16 O
ATOM 25 O5' G A 5 2.532 44.449 78.828 1.00 52.39 O
TER
ATOM 1 O3' C B 4 3.321 42.308 79.987 1.00 52.58 O
ATOM 2 P G B 5 2.893 42.906 78.566 1.00 53.09 P
ATOM 3 OP1 G B 5 1.667 42.164 78.133 1.00 48.26 O
ATOM 4 OP2 G B 5 4.153 42.979 77.756 1.00 51.16 O
ATOM 5 O5' G B 5 2.532 44.449 78.828 1.00 52.39 O
ATOM 6 C5' G B 5 2.267 45.272 77.697 1.00 52.99 C
ATOM 7 C4' G B 5 0.892 45.908 77.812 1.00 54.36 C
ATOM 8 O4' G B 5 -0.189 44.938 77.975 1.00 54.73 O
ATOM 9 C3' G B 5 0.779 46.868 78.981 1.00 55.28 C
ATOM 10 O3' G B 5 0.119 48.021 78.517 1.00 57.61 O
ATOM 11 C2' G B 5 -0.053 46.086 79.999 1.00 55.07 C
ATOM 12 O2' G B 5 -0.871 46.925 80.778 1.00 56.64 O
ATOM 13 C1' G B 5 -0.968 45.288 79.099 1.00 53.38 C
ATOM 14 N9 G B 5 -1.403 44.026 79.632 1.00 52.67 N
ATOM 15 C8 G B 5 -0.672 42.867 79.614 1.00 52.71 C
ATOM 16 N7 G B 5 -1.311 41.844 80.133 1.00 53.10 N
ATOM 17 C5 G B 5 -2.538 42.361 80.506 1.00 52.36 C
ATOM 18 C6 G B 5 -3.635 41.710 81.106 1.00 52.60 C
ATOM 19 O6 G B 5 -3.740 40.520 81.444 1.00 53.06 O
ATOM 20 N1 G B 5 -4.692 42.584 81.322 1.00 52.52 N
ATOM 21 C2 G B 5 -4.687 43.915 81.001 1.00 52.24 C
ATOM 22 N2 G B 5 -5.822 44.549 81.308 1.00 52.39 N
ATOM 23 N3 G B 5 -3.666 44.553 80.428 1.00 52.09 N
ATOM 24 C4 G B 5 -2.619 43.713 80.208 1.00 52.75 C
ATOM 25 P U B 6 0.892 49.139 77.682 1.00 60.25 P
ATOM 26 OP1 U B 6 1.241 48.655 76.327 1.00 59.28 O
ATOM 27 OP2 U B 6 1.957 49.699 78.550 1.00 61.37 O
ATOM 28 O5' U B 6 -0.266 50.213 77.509 1.00 62.91 O
TER
ATOM 2 P C A 4 3.106 46.789 82.505 1.00 59.09 P
ATOM 3 OP1 C A 4 4.223 47.117 81.572 1.00 57.51 O
ATOM 4 OP2 C A 4 1.845 47.575 82.447 1.00 57.86 O
ATOM 5 O5' C A 4 2.756 45.215 82.385 1.00 56.18 O
ATOM 6 C5' C A 4 3.850 44.295 82.378 1.00 53.88 C
ATOM 7 C4' C A 4 3.449 42.842 82.291 1.00 52.14 C
ATOM 8 O4' C A 4 2.698 42.440 83.461 1.00 51.40 O
ATOM 9 C3' C A 4 2.535 42.476 81.136 1.00 52.05 C
ATOM 10 O3' C A 4 3.321 42.308 79.987 1.00 52.58 O
ATOM 11 C2' C A 4 1.990 41.146 81.634 1.00 50.70 C
ATOM 12 O2' C A 4 2.956 40.113 81.575 1.00 50.77 O
ATOM 13 C1' C A 4 1.709 41.497 83.087 1.00 49.35 C
ATOM 14 N1 C A 4 0.366 42.098 83.344 1.00 48.43 N
ATOM 15 C2 C A 4 -0.738 41.266 83.611 1.00 48.56 C
ATOM 16 O2 C A 4 -0.627 40.029 83.620 1.00 49.52 O
ATOM 17 N3 C A 4 -1.938 41.849 83.860 1.00 48.14 N
ATOM 18 C4 C A 4 -2.059 43.182 83.840 1.00 48.70 C
ATOM 19 N4 C A 4 -3.269 43.683 84.094 1.00 48.83 N
ATOM 20 C5 C A 4 -0.958 44.060 83.576 1.00 48.37 C
ATOM 21 C6 C A 4 0.221 43.469 83.341 1.00 48.46 C
ATOM 22 P G A 5 2.893 42.906 78.566 1.00 53.09 P
ATOM 23 OP1 G A 5 1.667 42.164 78.133 1.00 48.26 O
ATOM 24 OP2 G A 5 4.153 42.979 77.756 1.00 51.16 O
ATOM 25 O5' G A 5 2.532 44.449 78.828 1.00 52.39 O
TER
ATOM 1 O3' C B 4 3.321 42.308 79.987 1.00 52.58 O
ATOM 2 P G B 5 2.893 42.906 78.566 1.00 53.09 P
ATOM 3 OP1 G B 5 1.667 42.164 78.133 1.00 48.26 O
ATOM 4 OP2 G B 5 4.153 42.979 77.756 1.00 51.16 O
ATOM 5 O5' G B 5 2.532 44.449 78.828 1.00 52.39 O
ATOM 6 C5' G B 5 2.267 45.272 77.697 1.00 52.99 C
ATOM 7 C4' G B 5 0.892 45.908 77.812 1.00 54.36 C
ATOM 8 O4' G B 5 -0.189 44.938 77.975 1.00 54.73 O
ATOM 9 C3' G B 5 0.779 46.868 78.981 1.00 55.28 C
ATOM 10 O3' G B 5 0.119 48.021 78.517 1.00 57.61 O
ATOM 11 C2' G B 5 -0.053 46.086 79.999 1.00 55.07 C
ATOM 12 O2' G B 5 -0.871 46.925 80.778 1.00 56.64 O
ATOM 13 C1' G B 5 -0.968 45.288 79.099 1.00 53.38 C
ATOM 14 N9 G B 5 -1.403 44.026 79.632 1.00 52.67 N
ATOM 15 C8 G B 5 -0.672 42.867 79.614 1.00 52.71 C
ATOM 16 N7 G B 5 -1.311 41.844 80.133 1.00 53.10 N
ATOM 17 C5 G B 5 -2.538 42.361 80.506 1.00 52.36 C
ATOM 18 C6 G B 5 -3.635 41.710 81.106 1.00 52.60 C
ATOM 19 O6 G B 5 -3.740 40.520 81.444 1.00 53.06 O
ATOM 20 N1 G B 5 -4.692 42.584 81.322 1.00 52.52 N
ATOM 21 C2 G B 5 -4.687 43.915 81.001 1.00 52.24 C
ATOM 22 N2 G B 5 -5.822 44.549 81.308 1.00 52.39 N
ATOM 23 N3 G B 5 -3.666 44.553 80.428 1.00 52.09 N
ATOM 24 C4 G B 5 -2.619 43.713 80.208 1.00 52.75 C
ATOM 25 P U B 6 0.892 49.139 77.682 1.00 60.25 P
ATOM 26 OP1 U B 6 1.241 48.655 76.327 1.00 59.28 O
ATOM 27 OP2 U B 6 1.957 49.699 78.550 1.00 61.37 O
ATOM 28 O5' U B 6 -0.266 50.213 77.509 1.00 62.91 O
TER
Atoms:
C2: (-0.738,41.266,83.611)
OP1: (4.223,47.117,81.572)
OP2: (1.845,47.575,82.447)
C4: (-2.059,43.182,83.840)
O5': (2.756,45.215,82.385)
C3': (2.535,42.476,81.136)
C1': (1.709,41.497,83.087)
O4': (2.698,42.440,83.461)
C5': (3.850,44.295,82.378)
P: (3.106,46.789,82.505)
O2: (-0.627,40.029,83.620)
C4': (3.449,42.842,82.291)
C2': (1.990,41.146,81.634)
O2': (2.956,40.113,81.575)
N1: (0.366,42.098,83.344)
N3: (-1.938,41.849,83.860)
N4: (-3.269,43.683,84.094)
C6: (0.221,43.469,83.341)
C5: (-0.958,44.060,83.576)
O3': (3.321,42.308,79.987)
OP1: (4.223,47.117,81.572)
OP2: (1.845,47.575,82.447)
C4: (-2.059,43.182,83.840)
O5': (2.756,45.215,82.385)
C3': (2.535,42.476,81.136)
C1': (1.709,41.497,83.087)
O4': (2.698,42.440,83.461)
C5': (3.850,44.295,82.378)
P: (3.106,46.789,82.505)
O2: (-0.627,40.029,83.620)
C4': (3.449,42.842,82.291)
C2': (1.990,41.146,81.634)
O2': (2.956,40.113,81.575)
N1: (0.366,42.098,83.344)
N3: (-1.938,41.849,83.860)
N4: (-3.269,43.683,84.094)
C6: (0.221,43.469,83.341)
C5: (-0.958,44.060,83.576)
O3': (3.321,42.308,79.987)
OP1: (1.667,42.164,78.133)
OP2: (4.153,42.979,77.756)
C3': (0.779,46.868,78.981)
C1': (-0.968,45.288,79.099)
C5': (2.267,45.272,77.697)
O6: (-3.740,40.520,81.444)
O4': (-0.189,44.938,77.975)
C8: (-0.672,42.867,79.614)
C2: (-4.687,43.915,81.001)
C6: (-3.635,41.710,81.106)
C5: (-2.538,42.361,80.506)
C4: (-2.619,43.713,80.208)
P: (2.893,42.906,78.566)
C4': (0.892,45.908,77.812)
C2': (-0.053,46.086,79.999)
O2': (-0.871,46.925,80.778)
N1: (-4.692,42.584,81.322)
N2: (-5.822,44.549,81.308)
N3: (-3.666,44.553,80.428)
N7: (-1.311,41.844,80.133)
N9: (-1.403,44.026,79.632)
O5': (2.532,44.449,78.828)
O3': (0.119,48.021,78.517)
OP2: (4.153,42.979,77.756)
C3': (0.779,46.868,78.981)
C1': (-0.968,45.288,79.099)
C5': (2.267,45.272,77.697)
O6: (-3.740,40.520,81.444)
O4': (-0.189,44.938,77.975)
C8: (-0.672,42.867,79.614)
C2: (-4.687,43.915,81.001)
C6: (-3.635,41.710,81.106)
C5: (-2.538,42.361,80.506)
C4: (-2.619,43.713,80.208)
P: (2.893,42.906,78.566)
C4': (0.892,45.908,77.812)
C2': (-0.053,46.086,79.999)
O2': (-0.871,46.925,80.778)
N1: (-4.692,42.584,81.322)
N2: (-5.822,44.549,81.308)
N3: (-3.666,44.553,80.428)
N7: (-1.311,41.844,80.133)
N9: (-1.403,44.026,79.632)
O5': (2.532,44.449,78.828)
O3': (0.119,48.021,78.517)
Image (generated by PyMOL):