Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0880:0879
Extra
PDB:
ATOM 1 O3' G A 879 65.271 117.534 54.829 1.00 28.75 O
ATOM 2 P C A 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 3 OP1 C A 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 4 OP2 C A 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 5 O5' C A 880 63.307 117.904 56.387 1.00 26.33 O
ATOM 6 C5' C A 880 61.941 117.733 56.761 1.00 28.38 C
ATOM 7 C4' C A 880 61.584 118.697 57.860 1.00 29.17 C
ATOM 8 O4' C A 880 62.270 118.327 59.084 1.00 28.86 O
ATOM 9 C3' C A 880 61.956 120.144 57.590 1.00 28.40 C
ATOM 10 O3' C A 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 11 C2' C A 880 63.330 120.252 58.251 1.00 28.76 C
ATOM 12 O2' C A 880 63.656 121.565 58.655 1.00 30.73 O
ATOM 13 C1' C A 880 63.136 119.368 59.479 1.00 28.08 C
ATOM 14 N1 C A 880 64.352 118.754 60.042 1.00 26.81 N
ATOM 15 C2 C A 880 64.909 119.303 61.193 1.00 27.51 C
ATOM 16 O2 C A 880 64.434 120.359 61.645 1.00 30.28 O
ATOM 17 N3 C A 880 65.952 118.681 61.784 1.00 26.12 N
ATOM 18 C4 C A 880 66.452 117.569 61.249 1.00 26.94 C
ATOM 19 N4 C A 880 67.458 116.959 61.887 1.00 27.35 N
ATOM 20 C5 C A 880 65.941 117.023 60.041 1.00 26.95 C
ATOM 21 C6 C A 880 64.903 117.642 59.476 1.00 26.54 C
ATOM 22 P A A 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 23 OP1 A A 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 24 OP2 A A 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 25 O5' A A 881 58.714 120.116 58.878 1.00 28.73 O
TER
ATOM 1 O3' G B 878 64.656 123.611 54.358 1.00 26.94 O
ATOM 2 P G B 879 63.826 122.418 55.032 1.00 27.28 P
ATOM 3 OP1 G B 879 62.835 121.949 54.042 1.00 26.18 O
ATOM 4 OP2 G B 879 63.362 122.880 56.364 1.00 26.18 O
ATOM 5 O5' G B 879 64.929 121.289 55.245 1.00 24.58 O
ATOM 6 C5' G B 879 65.555 120.672 54.125 1.00 21.45 C
ATOM 7 C4' G B 879 66.514 119.603 54.579 1.00 24.90 C
ATOM 8 O4' G B 879 67.619 120.187 55.311 1.00 25.34 O
ATOM 9 C3' G B 879 66.000 118.529 55.525 1.00 24.49 C
ATOM 10 O3' G B 879 65.271 117.534 54.829 1.00 28.75 O
ATOM 11 C2' G B 879 67.303 117.948 56.050 1.00 23.41 C
ATOM 12 O2' G B 879 67.913 117.074 55.119 1.00 19.25 O
ATOM 13 C1' G B 879 68.144 119.218 56.214 1.00 23.62 C
ATOM 14 N9 G B 879 68.047 119.750 57.571 1.00 22.20 N
ATOM 15 C8 G B 879 67.258 120.787 57.999 1.00 22.00 C
ATOM 16 N7 G B 879 67.378 121.026 59.273 1.00 21.39 N
ATOM 17 C5 G B 879 68.302 120.093 59.713 1.00 18.49 C
ATOM 18 C6 G B 879 68.829 119.869 61.002 1.00 18.03 C
ATOM 19 O6 G B 879 68.576 120.470 62.047 1.00 16.85 O
ATOM 20 N1 G B 879 69.737 118.819 61.006 1.00 17.32 N
ATOM 21 C2 G B 879 70.090 118.079 59.909 1.00 18.30 C
ATOM 22 N2 G B 879 70.982 117.110 60.110 1.00 19.34 N
ATOM 23 N3 G B 879 69.604 118.278 58.701 1.00 20.03 N
ATOM 24 C4 G B 879 68.723 119.297 58.675 1.00 19.43 C
ATOM 25 P C B 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 26 OP1 C B 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 27 OP2 C B 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 28 O5' C B 880 63.307 117.904 56.387 1.00 26.33 O
TER
ATOM 2 P C A 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 3 OP1 C A 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 4 OP2 C A 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 5 O5' C A 880 63.307 117.904 56.387 1.00 26.33 O
ATOM 6 C5' C A 880 61.941 117.733 56.761 1.00 28.38 C
ATOM 7 C4' C A 880 61.584 118.697 57.860 1.00 29.17 C
ATOM 8 O4' C A 880 62.270 118.327 59.084 1.00 28.86 O
ATOM 9 C3' C A 880 61.956 120.144 57.590 1.00 28.40 C
ATOM 10 O3' C A 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 11 C2' C A 880 63.330 120.252 58.251 1.00 28.76 C
ATOM 12 O2' C A 880 63.656 121.565 58.655 1.00 30.73 O
ATOM 13 C1' C A 880 63.136 119.368 59.479 1.00 28.08 C
ATOM 14 N1 C A 880 64.352 118.754 60.042 1.00 26.81 N
ATOM 15 C2 C A 880 64.909 119.303 61.193 1.00 27.51 C
ATOM 16 O2 C A 880 64.434 120.359 61.645 1.00 30.28 O
ATOM 17 N3 C A 880 65.952 118.681 61.784 1.00 26.12 N
ATOM 18 C4 C A 880 66.452 117.569 61.249 1.00 26.94 C
ATOM 19 N4 C A 880 67.458 116.959 61.887 1.00 27.35 N
ATOM 20 C5 C A 880 65.941 117.023 60.041 1.00 26.95 C
ATOM 21 C6 C A 880 64.903 117.642 59.476 1.00 26.54 C
ATOM 22 P A A 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 23 OP1 A A 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 24 OP2 A A 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 25 O5' A A 881 58.714 120.116 58.878 1.00 28.73 O
TER
ATOM 1 O3' G B 878 64.656 123.611 54.358 1.00 26.94 O
ATOM 2 P G B 879 63.826 122.418 55.032 1.00 27.28 P
ATOM 3 OP1 G B 879 62.835 121.949 54.042 1.00 26.18 O
ATOM 4 OP2 G B 879 63.362 122.880 56.364 1.00 26.18 O
ATOM 5 O5' G B 879 64.929 121.289 55.245 1.00 24.58 O
ATOM 6 C5' G B 879 65.555 120.672 54.125 1.00 21.45 C
ATOM 7 C4' G B 879 66.514 119.603 54.579 1.00 24.90 C
ATOM 8 O4' G B 879 67.619 120.187 55.311 1.00 25.34 O
ATOM 9 C3' G B 879 66.000 118.529 55.525 1.00 24.49 C
ATOM 10 O3' G B 879 65.271 117.534 54.829 1.00 28.75 O
ATOM 11 C2' G B 879 67.303 117.948 56.050 1.00 23.41 C
ATOM 12 O2' G B 879 67.913 117.074 55.119 1.00 19.25 O
ATOM 13 C1' G B 879 68.144 119.218 56.214 1.00 23.62 C
ATOM 14 N9 G B 879 68.047 119.750 57.571 1.00 22.20 N
ATOM 15 C8 G B 879 67.258 120.787 57.999 1.00 22.00 C
ATOM 16 N7 G B 879 67.378 121.026 59.273 1.00 21.39 N
ATOM 17 C5 G B 879 68.302 120.093 59.713 1.00 18.49 C
ATOM 18 C6 G B 879 68.829 119.869 61.002 1.00 18.03 C
ATOM 19 O6 G B 879 68.576 120.470 62.047 1.00 16.85 O
ATOM 20 N1 G B 879 69.737 118.819 61.006 1.00 17.32 N
ATOM 21 C2 G B 879 70.090 118.079 59.909 1.00 18.30 C
ATOM 22 N2 G B 879 70.982 117.110 60.110 1.00 19.34 N
ATOM 23 N3 G B 879 69.604 118.278 58.701 1.00 20.03 N
ATOM 24 C4 G B 879 68.723 119.297 58.675 1.00 19.43 C
ATOM 25 P C B 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 26 OP1 C B 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 27 OP2 C B 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 28 O5' C B 880 63.307 117.904 56.387 1.00 26.33 O
TER
Atoms:
C2: (64.909,119.303,61.193)
OP1: (64.598,115.777,56.477)
OP2: (63.142,116.375,54.448)
C4: (66.452,117.569,61.249)
O5': (63.307,117.904,56.387)
C3': (61.956,120.144,57.590)
C1': (63.136,119.368,59.479)
O4': (62.270,118.327,59.084)
C5': (61.941,117.733,56.761)
P: (64.050,116.788,55.544)
O2: (64.434,120.359,61.645)
C4': (61.584,118.697,57.860)
C2': (63.330,120.252,58.251)
O2': (63.656,121.565,58.655)
N1: (64.352,118.754,60.042)
N3: (65.952,118.681,61.784)
N4: (67.458,116.959,61.887)
C6: (64.903,117.642,59.476)
C5: (65.941,117.023,60.041)
O3': (61.005,120.954,58.265)
OP1: (64.598,115.777,56.477)
OP2: (63.142,116.375,54.448)
C4: (66.452,117.569,61.249)
O5': (63.307,117.904,56.387)
C3': (61.956,120.144,57.590)
C1': (63.136,119.368,59.479)
O4': (62.270,118.327,59.084)
C5': (61.941,117.733,56.761)
P: (64.050,116.788,55.544)
O2: (64.434,120.359,61.645)
C4': (61.584,118.697,57.860)
C2': (63.330,120.252,58.251)
O2': (63.656,121.565,58.655)
N1: (64.352,118.754,60.042)
N3: (65.952,118.681,61.784)
N4: (67.458,116.959,61.887)
C6: (64.903,117.642,59.476)
C5: (65.941,117.023,60.041)
O3': (61.005,120.954,58.265)
OP1: (62.835,121.949,54.042)
OP2: (63.362,122.880,56.364)
C3': (66.000,118.529,55.525)
C1': (68.144,119.218,56.214)
C5': (65.555,120.672,54.125)
O6: (68.576,120.470,62.047)
O4': (67.619,120.187,55.311)
C8: (67.258,120.787,57.999)
C2: (70.090,118.079,59.909)
C6: (68.829,119.869,61.002)
C5: (68.302,120.093,59.713)
C4: (68.723,119.297,58.675)
P: (63.826,122.418,55.032)
C4': (66.514,119.603,54.579)
C2': (67.303,117.948,56.050)
O2': (67.913,117.074,55.119)
N1: (69.737,118.819,61.006)
N2: (70.982,117.110,60.110)
N3: (69.604,118.278,58.701)
N7: (67.378,121.026,59.273)
N9: (68.047,119.750,57.571)
O5': (64.929,121.289,55.245)
O3': (65.271,117.534,54.829)
OP2: (63.362,122.880,56.364)
C3': (66.000,118.529,55.525)
C1': (68.144,119.218,56.214)
C5': (65.555,120.672,54.125)
O6: (68.576,120.470,62.047)
O4': (67.619,120.187,55.311)
C8: (67.258,120.787,57.999)
C2: (70.090,118.079,59.909)
C6: (68.829,119.869,61.002)
C5: (68.302,120.093,59.713)
C4: (68.723,119.297,58.675)
P: (63.826,122.418,55.032)
C4': (66.514,119.603,54.579)
C2': (67.303,117.948,56.050)
O2': (67.913,117.074,55.119)
N1: (69.737,118.819,61.006)
N2: (70.982,117.110,60.110)
N3: (69.604,118.278,58.701)
N7: (67.378,121.026,59.273)
N9: (68.047,119.750,57.571)
O5': (64.929,121.289,55.245)
O3': (65.271,117.534,54.829)
Image (generated by PyMOL):