Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B10:B9
Extra
PDB:
ATOM 1 O3' U A 9 -24.194 30.090 4.957 1.00 48.11 O
ATOM 2 P C A 10 -23.556 28.821 5.694 1.00 69.28 P
ATOM 3 OP1 C A 10 -23.354 27.772 4.658 1.00 60.46 O
ATOM 4 OP2 C A 10 -24.400 28.537 6.885 1.00 53.02 O
ATOM 5 O5' C A 10 -22.126 29.326 6.191 1.00 68.68 O
ATOM 6 C5' C A 10 -20.989 29.320 5.297 1.00 72.97 C
ATOM 7 C4' C A 10 -19.698 29.429 6.078 1.00 65.27 C
ATOM 8 O4' C A 10 -19.745 30.649 6.867 1.00 68.14 O
ATOM 9 C3' C A 10 -19.425 28.308 7.074 1.00 67.39 C
ATOM 10 O3' C A 10 -18.015 28.201 7.258 1.00 68.20 O
ATOM 11 C2' C A 10 -20.039 28.870 8.347 1.00 67.22 C
ATOM 12 O2' C A 10 -19.553 28.300 9.544 1.00 75.26 O
ATOM 13 C1' C A 10 -19.617 30.330 8.233 1.00 57.12 C
ATOM 14 N1 C A 10 -20.454 31.246 8.996 1.00 53.61 N
ATOM 15 C2 C A 10 -20.140 31.477 10.321 1.00 61.13 C
ATOM 16 O2 C A 10 -19.173 30.876 10.813 1.00 73.92 O
ATOM 17 N3 C A 10 -20.889 32.343 11.039 1.00 57.11 N
ATOM 18 C4 C A 10 -21.917 32.966 10.466 1.00 46.57 C
ATOM 19 N4 C A 10 -22.606 33.840 11.200 1.00 56.65 N
ATOM 20 C5 C A 10 -22.276 32.731 9.113 1.00 56.66 C
ATOM 21 C6 C A 10 -21.523 31.870 8.419 1.00 65.10 C
ATOM 22 P G A 11 -17.243 26.877 6.788 1.00 78.12 P
ATOM 23 OP1 G A 11 -18.267 25.911 6.315 1.00 77.41 O
ATOM 24 OP2 G A 11 -16.290 26.479 7.861 1.00 76.40 O
ATOM 25 O5' G A 11 -16.387 27.350 5.532 1.00 76.04 O
TER
ATOM 1 O3' U B 8 -25.246 35.757 7.736 1.00 69.08 O
ATOM 2 P U B 9 -25.846 34.422 8.404 1.00 73.82 P
ATOM 3 OP1 U B 9 -27.221 34.701 8.877 1.00 54.73 O
ATOM 4 OP2 U B 9 -24.853 33.884 9.361 1.00 75.12 O
ATOM 5 O5' U B 9 -25.894 33.424 7.168 1.00 57.43 O
ATOM 6 C5' U B 9 -26.197 32.042 7.344 1.00 58.91 C
ATOM 7 C4' U B 9 -25.897 31.302 6.072 1.00 54.88 C
ATOM 8 O4' U B 9 -26.571 31.990 4.981 1.00 49.89 O
ATOM 9 C3' U B 9 -24.428 31.273 5.690 1.00 53.75 C
ATOM 10 O3' U B 9 -24.194 30.090 4.957 1.00 48.11 O
ATOM 11 C2' U B 9 -24.299 32.478 4.768 1.00 51.98 C
ATOM 12 O2' U B 9 -23.225 32.369 3.855 1.00 66.44 O
ATOM 13 C1' U B 9 -25.627 32.419 4.029 1.00 42.74 C
ATOM 14 N1 U B 9 -26.070 33.713 3.502 1.00 41.48 N
ATOM 15 C2 U B 9 -25.985 33.904 2.156 1.00 35.84 C
ATOM 16 O2 U B 9 -25.552 33.064 1.406 1.00 56.33 O
ATOM 17 N3 U B 9 -26.431 35.116 1.713 1.00 39.82 N
ATOM 18 C4 U B 9 -26.948 36.137 2.471 1.00 31.08 C
ATOM 19 O4 U B 9 -27.291 37.187 1.921 1.00 49.50 O
ATOM 20 C5 U B 9 -27.001 35.866 3.863 1.00 25.64 C
ATOM 21 C6 U B 9 -26.564 34.690 4.322 1.00 41.34 C
ATOM 22 P C B 10 -23.556 28.821 5.694 1.00 69.28 P
ATOM 23 OP1 C B 10 -23.354 27.772 4.658 1.00 60.46 O
ATOM 24 OP2 C B 10 -24.400 28.537 6.885 1.00 53.02 O
ATOM 25 O5' C B 10 -22.126 29.326 6.191 1.00 68.68 O
TER
ATOM 2 P C A 10 -23.556 28.821 5.694 1.00 69.28 P
ATOM 3 OP1 C A 10 -23.354 27.772 4.658 1.00 60.46 O
ATOM 4 OP2 C A 10 -24.400 28.537 6.885 1.00 53.02 O
ATOM 5 O5' C A 10 -22.126 29.326 6.191 1.00 68.68 O
ATOM 6 C5' C A 10 -20.989 29.320 5.297 1.00 72.97 C
ATOM 7 C4' C A 10 -19.698 29.429 6.078 1.00 65.27 C
ATOM 8 O4' C A 10 -19.745 30.649 6.867 1.00 68.14 O
ATOM 9 C3' C A 10 -19.425 28.308 7.074 1.00 67.39 C
ATOM 10 O3' C A 10 -18.015 28.201 7.258 1.00 68.20 O
ATOM 11 C2' C A 10 -20.039 28.870 8.347 1.00 67.22 C
ATOM 12 O2' C A 10 -19.553 28.300 9.544 1.00 75.26 O
ATOM 13 C1' C A 10 -19.617 30.330 8.233 1.00 57.12 C
ATOM 14 N1 C A 10 -20.454 31.246 8.996 1.00 53.61 N
ATOM 15 C2 C A 10 -20.140 31.477 10.321 1.00 61.13 C
ATOM 16 O2 C A 10 -19.173 30.876 10.813 1.00 73.92 O
ATOM 17 N3 C A 10 -20.889 32.343 11.039 1.00 57.11 N
ATOM 18 C4 C A 10 -21.917 32.966 10.466 1.00 46.57 C
ATOM 19 N4 C A 10 -22.606 33.840 11.200 1.00 56.65 N
ATOM 20 C5 C A 10 -22.276 32.731 9.113 1.00 56.66 C
ATOM 21 C6 C A 10 -21.523 31.870 8.419 1.00 65.10 C
ATOM 22 P G A 11 -17.243 26.877 6.788 1.00 78.12 P
ATOM 23 OP1 G A 11 -18.267 25.911 6.315 1.00 77.41 O
ATOM 24 OP2 G A 11 -16.290 26.479 7.861 1.00 76.40 O
ATOM 25 O5' G A 11 -16.387 27.350 5.532 1.00 76.04 O
TER
ATOM 1 O3' U B 8 -25.246 35.757 7.736 1.00 69.08 O
ATOM 2 P U B 9 -25.846 34.422 8.404 1.00 73.82 P
ATOM 3 OP1 U B 9 -27.221 34.701 8.877 1.00 54.73 O
ATOM 4 OP2 U B 9 -24.853 33.884 9.361 1.00 75.12 O
ATOM 5 O5' U B 9 -25.894 33.424 7.168 1.00 57.43 O
ATOM 6 C5' U B 9 -26.197 32.042 7.344 1.00 58.91 C
ATOM 7 C4' U B 9 -25.897 31.302 6.072 1.00 54.88 C
ATOM 8 O4' U B 9 -26.571 31.990 4.981 1.00 49.89 O
ATOM 9 C3' U B 9 -24.428 31.273 5.690 1.00 53.75 C
ATOM 10 O3' U B 9 -24.194 30.090 4.957 1.00 48.11 O
ATOM 11 C2' U B 9 -24.299 32.478 4.768 1.00 51.98 C
ATOM 12 O2' U B 9 -23.225 32.369 3.855 1.00 66.44 O
ATOM 13 C1' U B 9 -25.627 32.419 4.029 1.00 42.74 C
ATOM 14 N1 U B 9 -26.070 33.713 3.502 1.00 41.48 N
ATOM 15 C2 U B 9 -25.985 33.904 2.156 1.00 35.84 C
ATOM 16 O2 U B 9 -25.552 33.064 1.406 1.00 56.33 O
ATOM 17 N3 U B 9 -26.431 35.116 1.713 1.00 39.82 N
ATOM 18 C4 U B 9 -26.948 36.137 2.471 1.00 31.08 C
ATOM 19 O4 U B 9 -27.291 37.187 1.921 1.00 49.50 O
ATOM 20 C5 U B 9 -27.001 35.866 3.863 1.00 25.64 C
ATOM 21 C6 U B 9 -26.564 34.690 4.322 1.00 41.34 C
ATOM 22 P C B 10 -23.556 28.821 5.694 1.00 69.28 P
ATOM 23 OP1 C B 10 -23.354 27.772 4.658 1.00 60.46 O
ATOM 24 OP2 C B 10 -24.400 28.537 6.885 1.00 53.02 O
ATOM 25 O5' C B 10 -22.126 29.326 6.191 1.00 68.68 O
TER
Atoms:
C2: (-20.140,31.477,10.321)
OP1: (-23.354,27.772,4.658)
OP2: (-24.400,28.537,6.885)
C4: (-21.917,32.966,10.466)
O5': (-22.126,29.326,6.191)
C3': (-19.425,28.308,7.074)
C1': (-19.617,30.330,8.233)
O4': (-19.745,30.649,6.867)
C5': (-20.989,29.320,5.297)
P: (-23.556,28.821,5.694)
O2: (-19.173,30.876,10.813)
C4': (-19.698,29.429,6.078)
C2': (-20.039,28.870,8.347)
O2': (-19.553,28.300,9.544)
N1: (-20.454,31.246,8.996)
N3: (-20.889,32.343,11.039)
N4: (-22.606,33.840,11.200)
C6: (-21.523,31.870,8.419)
C5: (-22.276,32.731,9.113)
O3': (-18.015,28.201,7.258)
OP1: (-23.354,27.772,4.658)
OP2: (-24.400,28.537,6.885)
C4: (-21.917,32.966,10.466)
O5': (-22.126,29.326,6.191)
C3': (-19.425,28.308,7.074)
C1': (-19.617,30.330,8.233)
O4': (-19.745,30.649,6.867)
C5': (-20.989,29.320,5.297)
P: (-23.556,28.821,5.694)
O2: (-19.173,30.876,10.813)
C4': (-19.698,29.429,6.078)
C2': (-20.039,28.870,8.347)
O2': (-19.553,28.300,9.544)
N1: (-20.454,31.246,8.996)
N3: (-20.889,32.343,11.039)
N4: (-22.606,33.840,11.200)
C6: (-21.523,31.870,8.419)
C5: (-22.276,32.731,9.113)
O3': (-18.015,28.201,7.258)
C4: (-26.948,36.137,2.471)
N3: (-26.431,35.116,1.713)
OP1: (-27.221,34.701,8.877)
OP2: (-24.853,33.884,9.361)
C2: (-25.985,33.904,2.156)
C1': (-25.627,32.419,4.029)
C3': (-24.428,31.273,5.690)
O5': (-25.894,33.424,7.168)
O4': (-26.571,31.990,4.981)
C5': (-26.197,32.042,7.344)
P: (-25.846,34.422,8.404)
C4': (-25.897,31.302,6.072)
C2': (-24.299,32.478,4.768)
O2': (-23.225,32.369,3.855)
N1: (-26.070,33.713,3.502)
O4: (-27.291,37.187,1.921)
O2: (-25.552,33.064,1.406)
C6: (-26.564,34.690,4.322)
C5: (-27.001,35.866,3.863)
O3': (-24.194,30.090,4.957)
N3: (-26.431,35.116,1.713)
OP1: (-27.221,34.701,8.877)
OP2: (-24.853,33.884,9.361)
C2: (-25.985,33.904,2.156)
C1': (-25.627,32.419,4.029)
C3': (-24.428,31.273,5.690)
O5': (-25.894,33.424,7.168)
O4': (-26.571,31.990,4.981)
C5': (-26.197,32.042,7.344)
P: (-25.846,34.422,8.404)
C4': (-25.897,31.302,6.072)
C2': (-24.299,32.478,4.768)
O2': (-23.225,32.369,3.855)
N1: (-26.070,33.713,3.502)
O4: (-27.291,37.187,1.921)
O2: (-25.552,33.064,1.406)
C6: (-26.564,34.690,4.322)
C5: (-27.001,35.866,3.863)
O3': (-24.194,30.090,4.957)
Image (generated by PyMOL):