Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11262:11125
Extra
PDB:
ATOM 1 O3' A A1261 50.905 9.303 10.230 1.00 46.53 O
ATOM 2 P A A1262 52.501 9.406 10.144 1.00 40.04 P
ATOM 3 OP1 A A1262 52.824 10.828 9.788 1.00 40.30 O
ATOM 4 OP2 A A1262 52.960 8.291 9.230 1.00 40.25 O
ATOM 5 O5' A A1262 52.959 9.112 11.653 1.00 39.52 O
ATOM 6 C5' A A1262 52.838 7.809 12.223 1.00 39.22 C
ATOM 7 C4' A A1262 51.983 7.809 13.473 1.00 38.82 C
ATOM 8 O4' A A1262 52.418 8.882 14.345 1.00 38.64 O
ATOM 9 C3' A A1262 50.492 8.043 13.253 1.00 38.92 C
ATOM 10 O3' A A1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 11 C2' A A1262 50.408 9.561 13.382 1.00 39.01 C
ATOM 12 O2' A A1262 49.116 10.070 13.619 1.00 39.00 O
ATOM 13 C1' A A1262 51.366 9.803 14.548 1.00 38.66 C
ATOM 14 N9 A A1262 51.957 11.139 14.580 1.00 38.78 N
ATOM 15 C8 A A1262 52.947 11.583 13.733 1.00 39.09 C
ATOM 16 N7 A A1262 53.344 12.813 13.942 1.00 39.16 N
ATOM 17 C5 A A1262 52.578 13.189 15.014 1.00 38.88 C
ATOM 18 C6 A A1262 52.542 14.398 15.698 1.00 38.82 C
ATOM 19 N6 A A1262 53.321 15.415 15.364 1.00 39.05 N
ATOM 20 N1 A A1262 51.639 14.508 16.717 1.00 38.53 N
ATOM 21 C2 A A1262 50.866 13.431 17.025 1.00 38.31 C
ATOM 22 N3 A A1262 50.854 12.221 16.441 1.00 38.34 N
ATOM 23 C4 A A1262 51.737 12.166 15.436 1.00 38.63 C
ATOM 24 P G A1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 25 OP1 G A1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 26 OP2 G A1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 27 O5' G A1263 47.749 5.993 13.969 1.00 41.96 O
TER
ATOM 1 O3' A B1124 63.205 8.133 12.074 1.00 41.28 O
ATOM 2 P U B1125 62.491 9.108 13.126 1.00 50.31 P
ATOM 3 OP1 U B1125 63.412 10.226 13.365 1.00 50.38 O
ATOM 4 OP2 U B1125 62.032 8.279 14.283 1.00 49.86 O
ATOM 5 O5' U B1125 61.226 9.633 12.355 1.00 50.54 O
ATOM 6 C5' U B1125 61.320 10.406 11.184 1.00 50.99 C
ATOM 7 C4' U B1125 59.968 10.505 10.596 1.00 51.14 C
ATOM 8 O4' U B1125 59.100 11.206 11.507 1.00 50.89 O
ATOM 9 C3' U B1125 59.830 11.182 9.245 1.00 51.65 C
ATOM 10 O3' U B1125 59.061 10.323 8.404 1.00 51.83 O
ATOM 11 C2' U B1125 58.992 12.415 9.555 1.00 51.65 C
ATOM 12 O2' U B1125 58.138 12.781 8.514 1.00 52.03 O
ATOM 13 C1' U B1125 58.192 11.939 10.744 1.00 51.19 C
ATOM 14 N1 U B1125 57.591 13.009 11.577 1.00 51.02 N
ATOM 15 C2 U B1125 56.264 12.793 11.944 1.00 50.86 C
ATOM 16 O2 U B1125 55.639 11.807 11.645 1.00 50.84 O
ATOM 17 N3 U B1125 55.678 13.732 12.725 1.00 50.71 N
ATOM 18 C4 U B1125 56.262 14.898 13.146 1.00 50.73 C
ATOM 19 O4 U B1125 55.593 15.687 13.824 1.00 50.61 O
ATOM 20 C5 U B1125 57.639 15.064 12.706 1.00 50.91 C
ATOM 21 C6 U B1125 58.270 14.137 11.963 1.00 51.05 C
ATOM 22 P A B1126 59.749 9.587 7.124 1.00 46.84 P
ATOM 23 OP1 A B1126 61.219 10.036 7.069 1.00 46.95 O
ATOM 24 OP2 A B1126 58.805 9.851 5.898 1.00 47.27 O
ATOM 25 O5' A B1126 59.704 8.061 7.529 1.00 46.57 O
TER
ATOM 2 P A A1262 52.501 9.406 10.144 1.00 40.04 P
ATOM 3 OP1 A A1262 52.824 10.828 9.788 1.00 40.30 O
ATOM 4 OP2 A A1262 52.960 8.291 9.230 1.00 40.25 O
ATOM 5 O5' A A1262 52.959 9.112 11.653 1.00 39.52 O
ATOM 6 C5' A A1262 52.838 7.809 12.223 1.00 39.22 C
ATOM 7 C4' A A1262 51.983 7.809 13.473 1.00 38.82 C
ATOM 8 O4' A A1262 52.418 8.882 14.345 1.00 38.64 O
ATOM 9 C3' A A1262 50.492 8.043 13.253 1.00 38.92 C
ATOM 10 O3' A A1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 11 C2' A A1262 50.408 9.561 13.382 1.00 39.01 C
ATOM 12 O2' A A1262 49.116 10.070 13.619 1.00 39.00 O
ATOM 13 C1' A A1262 51.366 9.803 14.548 1.00 38.66 C
ATOM 14 N9 A A1262 51.957 11.139 14.580 1.00 38.78 N
ATOM 15 C8 A A1262 52.947 11.583 13.733 1.00 39.09 C
ATOM 16 N7 A A1262 53.344 12.813 13.942 1.00 39.16 N
ATOM 17 C5 A A1262 52.578 13.189 15.014 1.00 38.88 C
ATOM 18 C6 A A1262 52.542 14.398 15.698 1.00 38.82 C
ATOM 19 N6 A A1262 53.321 15.415 15.364 1.00 39.05 N
ATOM 20 N1 A A1262 51.639 14.508 16.717 1.00 38.53 N
ATOM 21 C2 A A1262 50.866 13.431 17.025 1.00 38.31 C
ATOM 22 N3 A A1262 50.854 12.221 16.441 1.00 38.34 N
ATOM 23 C4 A A1262 51.737 12.166 15.436 1.00 38.63 C
ATOM 24 P G A1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 25 OP1 G A1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 26 OP2 G A1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 27 O5' G A1263 47.749 5.993 13.969 1.00 41.96 O
TER
ATOM 1 O3' A B1124 63.205 8.133 12.074 1.00 41.28 O
ATOM 2 P U B1125 62.491 9.108 13.126 1.00 50.31 P
ATOM 3 OP1 U B1125 63.412 10.226 13.365 1.00 50.38 O
ATOM 4 OP2 U B1125 62.032 8.279 14.283 1.00 49.86 O
ATOM 5 O5' U B1125 61.226 9.633 12.355 1.00 50.54 O
ATOM 6 C5' U B1125 61.320 10.406 11.184 1.00 50.99 C
ATOM 7 C4' U B1125 59.968 10.505 10.596 1.00 51.14 C
ATOM 8 O4' U B1125 59.100 11.206 11.507 1.00 50.89 O
ATOM 9 C3' U B1125 59.830 11.182 9.245 1.00 51.65 C
ATOM 10 O3' U B1125 59.061 10.323 8.404 1.00 51.83 O
ATOM 11 C2' U B1125 58.992 12.415 9.555 1.00 51.65 C
ATOM 12 O2' U B1125 58.138 12.781 8.514 1.00 52.03 O
ATOM 13 C1' U B1125 58.192 11.939 10.744 1.00 51.19 C
ATOM 14 N1 U B1125 57.591 13.009 11.577 1.00 51.02 N
ATOM 15 C2 U B1125 56.264 12.793 11.944 1.00 50.86 C
ATOM 16 O2 U B1125 55.639 11.807 11.645 1.00 50.84 O
ATOM 17 N3 U B1125 55.678 13.732 12.725 1.00 50.71 N
ATOM 18 C4 U B1125 56.262 14.898 13.146 1.00 50.73 C
ATOM 19 O4 U B1125 55.593 15.687 13.824 1.00 50.61 O
ATOM 20 C5 U B1125 57.639 15.064 12.706 1.00 50.91 C
ATOM 21 C6 U B1125 58.270 14.137 11.963 1.00 51.05 C
ATOM 22 P A B1126 59.749 9.587 7.124 1.00 46.84 P
ATOM 23 OP1 A B1126 61.219 10.036 7.069 1.00 46.95 O
ATOM 24 OP2 A B1126 58.805 9.851 5.898 1.00 47.27 O
ATOM 25 O5' A B1126 59.704 8.061 7.529 1.00 46.57 O
TER
Atoms:
OP1: (52.824,10.828,9.788)
OP2: (52.960,8.291,9.230)
C3': (50.492,8.043,13.253)
C1': (51.366,9.803,14.548)
C5': (52.838,7.809,12.223)
O4': (52.418,8.882,14.345)
C8: (52.947,11.583,13.733)
O2': (49.116,10.070,13.619)
C6: (52.542,14.398,15.698)
C5: (52.578,13.189,15.014)
C4: (51.737,12.166,15.436)
P: (52.501,9.406,10.144)
C4': (51.983,7.809,13.473)
C2': (50.408,9.561,13.382)
C2: (50.866,13.431,17.025)
N1: (51.639,14.508,16.717)
N3: (50.854,12.221,16.441)
N6: (53.321,15.415,15.364)
N7: (53.344,12.813,13.942)
N9: (51.957,11.139,14.580)
O5': (52.959,9.112,11.653)
O3': (49.748,7.422,14.326)
OP2: (52.960,8.291,9.230)
C3': (50.492,8.043,13.253)
C1': (51.366,9.803,14.548)
C5': (52.838,7.809,12.223)
O4': (52.418,8.882,14.345)
C8: (52.947,11.583,13.733)
O2': (49.116,10.070,13.619)
C6: (52.542,14.398,15.698)
C5: (52.578,13.189,15.014)
C4: (51.737,12.166,15.436)
P: (52.501,9.406,10.144)
C4': (51.983,7.809,13.473)
C2': (50.408,9.561,13.382)
C2: (50.866,13.431,17.025)
N1: (51.639,14.508,16.717)
N3: (50.854,12.221,16.441)
N6: (53.321,15.415,15.364)
N7: (53.344,12.813,13.942)
N9: (51.957,11.139,14.580)
O5': (52.959,9.112,11.653)
O3': (49.748,7.422,14.326)
C4: (56.262,14.898,13.146)
N3: (55.678,13.732,12.725)
OP1: (63.412,10.226,13.365)
OP2: (62.032,8.279,14.283)
C2: (56.264,12.793,11.944)
C1': (58.192,11.939,10.744)
C3': (59.830,11.182,9.245)
O5': (61.226,9.633,12.355)
O4': (59.100,11.206,11.507)
C5': (61.320,10.406,11.184)
P: (62.491,9.108,13.126)
C4': (59.968,10.505,10.596)
C2': (58.992,12.415,9.555)
O2': (58.138,12.781,8.514)
N1: (57.591,13.009,11.577)
O4: (55.593,15.687,13.824)
O2: (55.639,11.807,11.645)
C6: (58.270,14.137,11.963)
C5: (57.639,15.064,12.706)
O3': (59.061,10.323,8.404)
N3: (55.678,13.732,12.725)
OP1: (63.412,10.226,13.365)
OP2: (62.032,8.279,14.283)
C2: (56.264,12.793,11.944)
C1': (58.192,11.939,10.744)
C3': (59.830,11.182,9.245)
O5': (61.226,9.633,12.355)
O4': (59.100,11.206,11.507)
C5': (61.320,10.406,11.184)
P: (62.491,9.108,13.126)
C4': (59.968,10.505,10.596)
C2': (58.992,12.415,9.555)
O2': (58.138,12.781,8.514)
N1: (57.591,13.009,11.577)
O4: (55.593,15.687,13.824)
O2: (55.639,11.807,11.645)
C6: (58.270,14.137,11.963)
C5: (57.639,15.064,12.706)
O3': (59.061,10.323,8.404)
Image (generated by PyMOL):