Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2559:2558
Extra
PDB:
ATOM 1 O3' C A 558 -81.942 -1.409 35.402 1.00145.99 O
ATOM 2 P U A 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 3 OP1 U A 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 4 OP2 U A 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 5 O5' U A 559 -79.922 -2.088 34.120 1.00101.89 O
ATOM 6 C5' U A 559 -80.590 -1.807 32.908 1.00103.13 C
ATOM 7 C4' U A 559 -79.713 -1.068 31.952 1.00102.89 C
ATOM 8 O4' U A 559 -79.664 0.326 32.316 1.00102.12 O
ATOM 9 C3' U A 559 -78.265 -1.488 31.942 1.00101.97 C
ATOM 10 O3' U A 559 -78.039 -2.643 31.197 1.00102.75 O
ATOM 11 C2' U A 559 -77.582 -0.267 31.379 1.00101.45 C
ATOM 12 O2' U A 559 -77.833 -0.161 29.980 1.00102.62 O
ATOM 13 C1' U A 559 -78.361 0.826 32.095 1.00101.15 C
ATOM 14 N1 U A 559 -77.765 1.176 33.420 1.00 99.67 N
ATOM 15 C2 U A 559 -76.976 2.313 33.493 1.00 98.70 C
ATOM 16 O2 U A 559 -76.728 3.001 32.522 1.00 98.99 O
ATOM 17 N3 U A 559 -76.485 2.623 34.736 1.00 97.41 N
ATOM 18 C4 U A 559 -76.701 1.916 35.905 1.00 97.00 C
ATOM 19 O4 U A 559 -76.194 2.309 36.965 1.00 95.83 O
ATOM 20 C5 U A 559 -77.531 0.755 35.754 1.00 98.07 C
ATOM 21 C6 U A 559 -78.026 0.439 34.558 1.00 99.32 C
ATOM 22 P G A 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 23 OP1 G A 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 24 OP2 G A 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 25 O5' G A 560 -75.544 -2.788 31.211 1.00 89.42 O
TER
ATOM 1 O3' U B 557 -84.657 -1.050 41.495 1.00158.78 O
ATOM 2 P C B 558 -84.113 -1.647 40.100 1.00144.77 P
ATOM 3 OP1 C B 558 -85.293 -1.744 39.173 1.00146.32 O
ATOM 4 OP2 C B 558 -83.348 -2.889 40.408 1.00144.43 O
ATOM 5 O5' C B 558 -83.114 -0.499 39.603 1.00143.89 O
ATOM 6 C5' C B 558 -82.221 -0.725 38.529 1.00143.95 C
ATOM 7 C4' C B 558 -82.687 -0.043 37.275 1.00144.88 C
ATOM 8 O4' C B 558 -82.788 1.389 37.496 1.00144.35 O
ATOM 9 C3' C B 558 -81.766 -0.182 36.084 1.00144.99 C
ATOM 10 O3' C B 558 -81.942 -1.409 35.402 1.00145.99 O
ATOM 11 C2' C B 558 -82.088 1.049 35.246 1.00145.39 C
ATOM 12 O2' C B 558 -83.247 0.840 34.453 1.00146.91 O
ATOM 13 C1' C B 558 -82.408 2.087 36.332 1.00144.59 C
ATOM 14 N1 C B 558 -81.239 2.937 36.666 1.00143.21 N
ATOM 15 C2 C B 558 -80.623 3.767 35.716 1.00143.13 C
ATOM 16 O2 C B 558 -81.061 3.794 34.560 1.00144.23 O
ATOM 17 N3 C B 558 -79.553 4.526 36.069 1.00141.87 N
ATOM 18 C4 C B 558 -79.096 4.486 37.321 1.00140.73 C
ATOM 19 N4 C B 558 -78.048 5.243 37.633 1.00139.55 N
ATOM 20 C5 C B 558 -79.702 3.663 38.313 1.00140.78 C
ATOM 21 C6 C B 558 -80.758 2.920 37.945 1.00142.03 C
ATOM 22 P U B 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 23 OP1 U B 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 24 OP2 U B 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 25 O5' U B 559 -79.922 -2.088 34.120 1.00101.89 O
TER
ATOM 2 P U A 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 3 OP1 U A 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 4 OP2 U A 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 5 O5' U A 559 -79.922 -2.088 34.120 1.00101.89 O
ATOM 6 C5' U A 559 -80.590 -1.807 32.908 1.00103.13 C
ATOM 7 C4' U A 559 -79.713 -1.068 31.952 1.00102.89 C
ATOM 8 O4' U A 559 -79.664 0.326 32.316 1.00102.12 O
ATOM 9 C3' U A 559 -78.265 -1.488 31.942 1.00101.97 C
ATOM 10 O3' U A 559 -78.039 -2.643 31.197 1.00102.75 O
ATOM 11 C2' U A 559 -77.582 -0.267 31.379 1.00101.45 C
ATOM 12 O2' U A 559 -77.833 -0.161 29.980 1.00102.62 O
ATOM 13 C1' U A 559 -78.361 0.826 32.095 1.00101.15 C
ATOM 14 N1 U A 559 -77.765 1.176 33.420 1.00 99.67 N
ATOM 15 C2 U A 559 -76.976 2.313 33.493 1.00 98.70 C
ATOM 16 O2 U A 559 -76.728 3.001 32.522 1.00 98.99 O
ATOM 17 N3 U A 559 -76.485 2.623 34.736 1.00 97.41 N
ATOM 18 C4 U A 559 -76.701 1.916 35.905 1.00 97.00 C
ATOM 19 O4 U A 559 -76.194 2.309 36.965 1.00 95.83 O
ATOM 20 C5 U A 559 -77.531 0.755 35.754 1.00 98.07 C
ATOM 21 C6 U A 559 -78.026 0.439 34.558 1.00 99.32 C
ATOM 22 P G A 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 23 OP1 G A 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 24 OP2 G A 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 25 O5' G A 560 -75.544 -2.788 31.211 1.00 89.42 O
TER
ATOM 1 O3' U B 557 -84.657 -1.050 41.495 1.00158.78 O
ATOM 2 P C B 558 -84.113 -1.647 40.100 1.00144.77 P
ATOM 3 OP1 C B 558 -85.293 -1.744 39.173 1.00146.32 O
ATOM 4 OP2 C B 558 -83.348 -2.889 40.408 1.00144.43 O
ATOM 5 O5' C B 558 -83.114 -0.499 39.603 1.00143.89 O
ATOM 6 C5' C B 558 -82.221 -0.725 38.529 1.00143.95 C
ATOM 7 C4' C B 558 -82.687 -0.043 37.275 1.00144.88 C
ATOM 8 O4' C B 558 -82.788 1.389 37.496 1.00144.35 O
ATOM 9 C3' C B 558 -81.766 -0.182 36.084 1.00144.99 C
ATOM 10 O3' C B 558 -81.942 -1.409 35.402 1.00145.99 O
ATOM 11 C2' C B 558 -82.088 1.049 35.246 1.00145.39 C
ATOM 12 O2' C B 558 -83.247 0.840 34.453 1.00146.91 O
ATOM 13 C1' C B 558 -82.408 2.087 36.332 1.00144.59 C
ATOM 14 N1 C B 558 -81.239 2.937 36.666 1.00143.21 N
ATOM 15 C2 C B 558 -80.623 3.767 35.716 1.00143.13 C
ATOM 16 O2 C B 558 -81.061 3.794 34.560 1.00144.23 O
ATOM 17 N3 C B 558 -79.553 4.526 36.069 1.00141.87 N
ATOM 18 C4 C B 558 -79.096 4.486 37.321 1.00140.73 C
ATOM 19 N4 C B 558 -78.048 5.243 37.633 1.00139.55 N
ATOM 20 C5 C B 558 -79.702 3.663 38.313 1.00140.78 C
ATOM 21 C6 C B 558 -80.758 2.920 37.945 1.00142.03 C
ATOM 22 P U B 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 23 OP1 U B 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 24 OP2 U B 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 25 O5' U B 559 -79.922 -2.088 34.120 1.00101.89 O
TER
Atoms:
C4: (-76.701,1.916,35.905)
N3: (-76.485,2.623,34.736)
OP1: (-81.383,-3.828,35.185)
OP2: (-79.966,-2.286,36.632)
C2: (-76.976,2.313,33.493)
C1': (-78.361,0.826,32.095)
C3': (-78.265,-1.488,31.942)
O5': (-79.922,-2.088,34.120)
O4': (-79.664,0.326,32.316)
C5': (-80.590,-1.807,32.908)
P: (-80.764,-2.503,35.402)
C4': (-79.713,-1.068,31.952)
C2': (-77.582,-0.267,31.379)
O2': (-77.833,-0.161,29.980)
N1: (-77.765,1.176,33.420)
O4: (-76.194,2.309,36.965)
O2: (-76.728,3.001,32.522)
C6: (-78.026,0.439,34.558)
C5: (-77.531,0.755,35.754)
O3': (-78.039,-2.643,31.197)
N3: (-76.485,2.623,34.736)
OP1: (-81.383,-3.828,35.185)
OP2: (-79.966,-2.286,36.632)
C2: (-76.976,2.313,33.493)
C1': (-78.361,0.826,32.095)
C3': (-78.265,-1.488,31.942)
O5': (-79.922,-2.088,34.120)
O4': (-79.664,0.326,32.316)
C5': (-80.590,-1.807,32.908)
P: (-80.764,-2.503,35.402)
C4': (-79.713,-1.068,31.952)
C2': (-77.582,-0.267,31.379)
O2': (-77.833,-0.161,29.980)
N1: (-77.765,1.176,33.420)
O4: (-76.194,2.309,36.965)
O2: (-76.728,3.001,32.522)
C6: (-78.026,0.439,34.558)
C5: (-77.531,0.755,35.754)
O3': (-78.039,-2.643,31.197)
C2: (-80.623,3.767,35.716)
OP1: (-85.293,-1.744,39.173)
OP2: (-83.348,-2.889,40.408)
C4: (-79.096,4.486,37.321)
O5': (-83.114,-0.499,39.603)
C3': (-81.766,-0.182,36.084)
C1': (-82.408,2.087,36.332)
O4': (-82.788,1.389,37.496)
C5': (-82.221,-0.725,38.529)
P: (-84.113,-1.647,40.100)
O2: (-81.061,3.794,34.560)
C4': (-82.687,-0.043,37.275)
C2': (-82.088,1.049,35.246)
O2': (-83.247,0.840,34.453)
N1: (-81.239,2.937,36.666)
N3: (-79.553,4.526,36.069)
N4: (-78.048,5.243,37.633)
C6: (-80.758,2.920,37.945)
C5: (-79.702,3.663,38.313)
O3': (-81.942,-1.409,35.402)
OP1: (-85.293,-1.744,39.173)
OP2: (-83.348,-2.889,40.408)
C4: (-79.096,4.486,37.321)
O5': (-83.114,-0.499,39.603)
C3': (-81.766,-0.182,36.084)
C1': (-82.408,2.087,36.332)
O4': (-82.788,1.389,37.496)
C5': (-82.221,-0.725,38.529)
P: (-84.113,-1.647,40.100)
O2: (-81.061,3.794,34.560)
C4': (-82.687,-0.043,37.275)
C2': (-82.088,1.049,35.246)
O2': (-83.247,0.840,34.453)
N1: (-81.239,2.937,36.666)
N3: (-79.553,4.526,36.069)
N4: (-78.048,5.243,37.633)
C6: (-80.758,2.920,37.945)
C5: (-79.702,3.663,38.313)
O3': (-81.942,-1.409,35.402)
Image (generated by PyMOL):