Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1FJG:A1379:X5
Extra
PDB:
ATOM 1 O3' G A1378 193.975 106.287 -10.111 1.00 52.15 O
ATOM 2 P C A1379 193.624 104.731 -10.254 1.00 57.47 P
ATOM 3 OP1 C A1379 192.854 104.296 -9.058 1.00 61.53 O
ATOM 4 OP2 C A1379 194.884 104.032 -10.616 1.00 61.53 O
ATOM 5 O5' C A1379 192.637 104.657 -11.497 1.00 57.47 O
ATOM 6 C5' C A1379 191.345 105.277 -11.440 1.00 57.47 C
ATOM 7 C4' C A1379 190.700 105.275 -12.804 1.00 57.47 C
ATOM 8 O4' C A1379 191.590 105.932 -13.745 1.00 57.47 O
ATOM 9 C3' C A1379 190.423 103.917 -13.426 1.00 57.47 C
ATOM 10 O3' C A1379 189.185 103.377 -12.995 1.00 57.47 O
ATOM 11 C2' C A1379 190.394 104.243 -14.912 1.00 57.47 C
ATOM 12 O2' C A1379 189.161 104.798 -15.331 1.00 57.47 O
ATOM 13 C1' C A1379 191.483 105.313 -15.015 1.00 57.47 C
ATOM 14 N1 C A1379 192.794 104.738 -15.385 1.00 61.53 N
ATOM 15 C2 C A1379 192.988 104.321 -16.697 1.00 61.53 C
ATOM 16 O2 C A1379 192.081 104.483 -17.514 1.00 61.53 O
ATOM 17 N3 C A1379 194.155 103.751 -17.047 1.00 61.53 N
ATOM 18 C4 C A1379 195.115 103.592 -16.140 1.00 61.53 C
ATOM 19 N4 C A1379 196.246 102.987 -16.528 1.00 61.53 N
ATOM 20 C5 C A1379 194.959 104.034 -14.796 1.00 61.53 C
ATOM 21 C6 C A1379 193.794 104.597 -14.465 1.00 61.53 C
ATOM 22 P C A1380 189.002 101.779 -12.907 1.00 56.89 P
ATOM 23 OP1 C A1380 187.583 101.459 -12.585 1.00 78.14 O
ATOM 24 OP2 C A1380 190.082 101.227 -12.053 1.00 78.14 O
ATOM 25 O5' C A1380 189.250 101.296 -14.400 1.00 56.89 O
TER
ATOM 1 O3' C B 4 200.520 99.902 -15.595 1.00 62.28 O
ATOM 2 P U B 5 199.591 100.876 -14.718 1.00 82.97 P
ATOM 3 OP1 U B 5 198.581 100.017 -14.062 1.00 59.12 O
ATOM 4 OP2 U B 5 199.155 102.012 -15.573 1.00 59.12 O
ATOM 5 O5' U B 5 200.565 101.442 -13.590 1.00 82.97 O
ATOM 6 C5' U B 5 200.956 100.622 -12.467 1.00 82.97 C
ATOM 7 C4' U B 5 201.831 101.409 -11.516 1.00 82.97 C
ATOM 8 O4' U B 5 203.037 101.833 -12.202 1.00 82.97 O
ATOM 9 C3' U B 5 201.238 102.697 -10.970 1.00 82.97 C
ATOM 10 O3' U B 5 200.165 102.585 -10.028 1.00 82.97 O
ATOM 11 C2' U B 5 202.470 103.513 -10.607 1.00 82.97 C
ATOM 12 O2' U B 5 203.029 103.120 -9.368 1.00 82.97 O
ATOM 13 C1' U B 5 203.442 103.105 -11.718 1.00 82.97 C
ATOM 14 N1 U B 5 203.475 104.045 -12.852 1.00 59.12 N
ATOM 15 C2 U B 5 204.348 105.134 -12.784 1.00 59.12 C
ATOM 16 O2 U B 5 205.091 105.348 -11.829 1.00 59.12 O
ATOM 17 N3 U B 5 204.318 105.964 -13.881 1.00 59.12 N
ATOM 18 C4 U B 5 203.530 105.825 -15.012 1.00 59.12 C
ATOM 19 O4 U B 5 203.616 106.656 -15.922 1.00 59.12 O
ATOM 20 C5 U B 5 202.668 104.681 -15.001 1.00 59.12 C
ATOM 21 C6 U B 5 202.668 103.856 -13.952 1.00 59.12 C
TER
ATOM 2 P C A1379 193.624 104.731 -10.254 1.00 57.47 P
ATOM 3 OP1 C A1379 192.854 104.296 -9.058 1.00 61.53 O
ATOM 4 OP2 C A1379 194.884 104.032 -10.616 1.00 61.53 O
ATOM 5 O5' C A1379 192.637 104.657 -11.497 1.00 57.47 O
ATOM 6 C5' C A1379 191.345 105.277 -11.440 1.00 57.47 C
ATOM 7 C4' C A1379 190.700 105.275 -12.804 1.00 57.47 C
ATOM 8 O4' C A1379 191.590 105.932 -13.745 1.00 57.47 O
ATOM 9 C3' C A1379 190.423 103.917 -13.426 1.00 57.47 C
ATOM 10 O3' C A1379 189.185 103.377 -12.995 1.00 57.47 O
ATOM 11 C2' C A1379 190.394 104.243 -14.912 1.00 57.47 C
ATOM 12 O2' C A1379 189.161 104.798 -15.331 1.00 57.47 O
ATOM 13 C1' C A1379 191.483 105.313 -15.015 1.00 57.47 C
ATOM 14 N1 C A1379 192.794 104.738 -15.385 1.00 61.53 N
ATOM 15 C2 C A1379 192.988 104.321 -16.697 1.00 61.53 C
ATOM 16 O2 C A1379 192.081 104.483 -17.514 1.00 61.53 O
ATOM 17 N3 C A1379 194.155 103.751 -17.047 1.00 61.53 N
ATOM 18 C4 C A1379 195.115 103.592 -16.140 1.00 61.53 C
ATOM 19 N4 C A1379 196.246 102.987 -16.528 1.00 61.53 N
ATOM 20 C5 C A1379 194.959 104.034 -14.796 1.00 61.53 C
ATOM 21 C6 C A1379 193.794 104.597 -14.465 1.00 61.53 C
ATOM 22 P C A1380 189.002 101.779 -12.907 1.00 56.89 P
ATOM 23 OP1 C A1380 187.583 101.459 -12.585 1.00 78.14 O
ATOM 24 OP2 C A1380 190.082 101.227 -12.053 1.00 78.14 O
ATOM 25 O5' C A1380 189.250 101.296 -14.400 1.00 56.89 O
TER
ATOM 1 O3' C B 4 200.520 99.902 -15.595 1.00 62.28 O
ATOM 2 P U B 5 199.591 100.876 -14.718 1.00 82.97 P
ATOM 3 OP1 U B 5 198.581 100.017 -14.062 1.00 59.12 O
ATOM 4 OP2 U B 5 199.155 102.012 -15.573 1.00 59.12 O
ATOM 5 O5' U B 5 200.565 101.442 -13.590 1.00 82.97 O
ATOM 6 C5' U B 5 200.956 100.622 -12.467 1.00 82.97 C
ATOM 7 C4' U B 5 201.831 101.409 -11.516 1.00 82.97 C
ATOM 8 O4' U B 5 203.037 101.833 -12.202 1.00 82.97 O
ATOM 9 C3' U B 5 201.238 102.697 -10.970 1.00 82.97 C
ATOM 10 O3' U B 5 200.165 102.585 -10.028 1.00 82.97 O
ATOM 11 C2' U B 5 202.470 103.513 -10.607 1.00 82.97 C
ATOM 12 O2' U B 5 203.029 103.120 -9.368 1.00 82.97 O
ATOM 13 C1' U B 5 203.442 103.105 -11.718 1.00 82.97 C
ATOM 14 N1 U B 5 203.475 104.045 -12.852 1.00 59.12 N
ATOM 15 C2 U B 5 204.348 105.134 -12.784 1.00 59.12 C
ATOM 16 O2 U B 5 205.091 105.348 -11.829 1.00 59.12 O
ATOM 17 N3 U B 5 204.318 105.964 -13.881 1.00 59.12 N
ATOM 18 C4 U B 5 203.530 105.825 -15.012 1.00 59.12 C
ATOM 19 O4 U B 5 203.616 106.656 -15.922 1.00 59.12 O
ATOM 20 C5 U B 5 202.668 104.681 -15.001 1.00 59.12 C
ATOM 21 C6 U B 5 202.668 103.856 -13.952 1.00 59.12 C
TER
Atoms:
C2: (192.988,104.321,-16.697)
OP1: (192.854,104.296,-9.058)
OP2: (194.884,104.032,-10.616)
C4: (195.115,103.592,-16.140)
O5': (192.637,104.657,-11.497)
C3': (190.423,103.917,-13.426)
C1': (191.483,105.313,-15.015)
O4': (191.590,105.932,-13.745)
C5': (191.345,105.277,-11.440)
P: (193.624,104.731,-10.254)
O2: (192.081,104.483,-17.514)
C4': (190.700,105.275,-12.804)
C2': (190.394,104.243,-14.912)
O2': (189.161,104.798,-15.331)
N1: (192.794,104.738,-15.385)
N3: (194.155,103.751,-17.047)
N4: (196.246,102.987,-16.528)
C6: (193.794,104.597,-14.465)
C5: (194.959,104.034,-14.796)
O3': (189.185,103.377,-12.995)
OP1: (192.854,104.296,-9.058)
OP2: (194.884,104.032,-10.616)
C4: (195.115,103.592,-16.140)
O5': (192.637,104.657,-11.497)
C3': (190.423,103.917,-13.426)
C1': (191.483,105.313,-15.015)
O4': (191.590,105.932,-13.745)
C5': (191.345,105.277,-11.440)
P: (193.624,104.731,-10.254)
O2: (192.081,104.483,-17.514)
C4': (190.700,105.275,-12.804)
C2': (190.394,104.243,-14.912)
O2': (189.161,104.798,-15.331)
N1: (192.794,104.738,-15.385)
N3: (194.155,103.751,-17.047)
N4: (196.246,102.987,-16.528)
C6: (193.794,104.597,-14.465)
C5: (194.959,104.034,-14.796)
O3': (189.185,103.377,-12.995)
C4: (203.530,105.825,-15.012)
N3: (204.318,105.964,-13.881)
OP1: (198.581,100.017,-14.062)
OP2: (199.155,102.012,-15.573)
C2: (204.348,105.134,-12.784)
C1': (203.442,103.105,-11.718)
C3': (201.238,102.697,-10.970)
O5': (200.565,101.442,-13.590)
O4': (203.037,101.833,-12.202)
C5': (200.956,100.622,-12.467)
P: (199.591,100.876,-14.718)
C4': (201.831,101.409,-11.516)
C2': (202.470,103.513,-10.607)
O2': (203.029,103.120,-9.368)
N1: (203.475,104.045,-12.852)
O4: (203.616,106.656,-15.922)
O2: (205.091,105.348,-11.829)
C6: (202.668,103.856,-13.952)
C5: (202.668,104.681,-15.001)
O3': (200.165,102.585,-10.028)
N3: (204.318,105.964,-13.881)
OP1: (198.581,100.017,-14.062)
OP2: (199.155,102.012,-15.573)
C2: (204.348,105.134,-12.784)
C1': (203.442,103.105,-11.718)
C3': (201.238,102.697,-10.970)
O5': (200.565,101.442,-13.590)
O4': (203.037,101.833,-12.202)
C5': (200.956,100.622,-12.467)
P: (199.591,100.876,-14.718)
C4': (201.831,101.409,-11.516)
C2': (202.470,103.513,-10.607)
O2': (203.029,103.120,-9.368)
N1: (203.475,104.045,-12.852)
O4: (203.616,106.656,-15.922)
O2: (205.091,105.348,-11.829)
C6: (202.668,103.856,-13.952)
C5: (202.668,104.681,-15.001)
O3': (200.165,102.585,-10.028)
Image (generated by PyMOL):