Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.145 121.248 104.045 1.00 32.95 O
ATOM 2 P C A2023 34.253 120.293 104.971 1.00 32.07 P
ATOM 3 OP1 C A2023 32.928 120.185 104.327 1.00 35.12 O
ATOM 4 OP2 C A2023 34.348 120.775 106.362 1.00 31.96 O
ATOM 5 O5' C A2023 34.965 118.874 104.865 1.00 30.78 O
ATOM 6 C5' C A2023 34.535 117.908 103.887 1.00 29.73 C
ATOM 7 C4' C A2023 34.849 116.521 104.373 1.00 29.71 C
ATOM 8 O4' C A2023 36.279 116.303 104.349 1.00 27.57 O
ATOM 9 C3' C A2023 34.427 116.305 105.813 1.00 28.89 C
ATOM 10 O3' C A2023 33.073 115.866 105.851 1.00 28.65 O
ATOM 11 C2' C A2023 35.422 115.268 106.313 1.00 27.76 C
ATOM 12 O2' C A2023 35.064 113.956 105.957 1.00 28.55 O
ATOM 13 C1' C A2023 36.683 115.655 105.536 1.00 27.59 C
ATOM 14 N1 C A2023 37.628 116.538 106.243 1.00 28.11 N
ATOM 15 C2 C A2023 38.410 116.005 107.269 1.00 29.65 C
ATOM 16 O2 C A2023 38.238 114.819 107.602 1.00 29.28 O
ATOM 17 N3 C A2023 39.325 116.793 107.877 1.00 29.01 N
ATOM 18 C4 C A2023 39.457 118.071 107.510 1.00 28.81 C
ATOM 19 N4 C A2023 40.379 118.811 108.129 1.00 28.19 N
ATOM 20 C5 C A2023 38.651 118.646 106.490 1.00 27.92 C
ATOM 21 C6 C A2023 37.759 117.853 105.890 1.00 28.01 C
ATOM 22 P U A2024 32.086 116.406 106.998 1.00 28.85 P
ATOM 23 OP1 U A2024 30.751 115.823 106.707 1.00 29.44 O
ATOM 24 OP2 U A2024 32.227 117.878 107.123 1.00 28.23 O
ATOM 25 O5' U A2024 32.653 115.734 108.328 1.00 28.87 O
TER
ATOM 1 O3' G B2021 40.311 124.000 107.296 1.00 29.25 O
ATOM 2 P U B2022 40.039 122.507 106.760 1.00 28.32 P
ATOM 3 OP1 U B2022 39.585 121.695 107.899 1.00 30.75 O
ATOM 4 OP2 U B2022 41.235 122.076 105.994 1.00 31.50 O
ATOM 5 O5' U B2022 38.851 122.670 105.718 1.00 28.28 O
ATOM 6 C5' U B2022 37.553 123.109 106.118 1.00 30.09 C
ATOM 7 C4' U B2022 36.583 122.930 104.977 1.00 31.29 C
ATOM 8 O4' U B2022 36.984 123.785 103.865 1.00 31.24 O
ATOM 9 C3' U B2022 36.484 121.514 104.411 1.00 32.02 C
ATOM 10 O3' U B2022 35.145 121.248 104.045 1.00 32.95 O
ATOM 11 C2' U B2022 37.359 121.580 103.165 1.00 32.45 C
ATOM 12 O2' U B2022 37.003 120.657 102.152 1.00 35.00 O
ATOM 13 C1' U B2022 37.093 123.004 102.692 1.00 29.53 C
ATOM 14 N1 U B2022 38.180 123.523 101.853 1.00 28.67 N
ATOM 15 C2 U B2022 37.899 123.770 100.518 1.00 27.61 C
ATOM 16 O2 U B2022 36.787 123.679 100.048 1.00 24.87 O
ATOM 17 N3 U B2022 38.981 124.143 99.758 1.00 27.19 N
ATOM 18 C4 U B2022 40.279 124.315 100.194 1.00 26.84 C
ATOM 19 O4 U B2022 41.158 124.566 99.376 1.00 28.34 O
ATOM 20 C5 U B2022 40.476 124.103 101.594 1.00 24.77 C
ATOM 21 C6 U B2022 39.448 123.724 102.357 1.00 27.77 C
ATOM 22 P C B2023 34.253 120.293 104.971 1.00 32.07 P
ATOM 23 OP1 C B2023 32.928 120.185 104.327 1.00 35.12 O
ATOM 24 OP2 C B2023 34.348 120.775 106.362 1.00 31.96 O
ATOM 25 O5' C B2023 34.965 118.874 104.865 1.00 30.78 O
TER
ATOM 2 P C A2023 34.253 120.293 104.971 1.00 32.07 P
ATOM 3 OP1 C A2023 32.928 120.185 104.327 1.00 35.12 O
ATOM 4 OP2 C A2023 34.348 120.775 106.362 1.00 31.96 O
ATOM 5 O5' C A2023 34.965 118.874 104.865 1.00 30.78 O
ATOM 6 C5' C A2023 34.535 117.908 103.887 1.00 29.73 C
ATOM 7 C4' C A2023 34.849 116.521 104.373 1.00 29.71 C
ATOM 8 O4' C A2023 36.279 116.303 104.349 1.00 27.57 O
ATOM 9 C3' C A2023 34.427 116.305 105.813 1.00 28.89 C
ATOM 10 O3' C A2023 33.073 115.866 105.851 1.00 28.65 O
ATOM 11 C2' C A2023 35.422 115.268 106.313 1.00 27.76 C
ATOM 12 O2' C A2023 35.064 113.956 105.957 1.00 28.55 O
ATOM 13 C1' C A2023 36.683 115.655 105.536 1.00 27.59 C
ATOM 14 N1 C A2023 37.628 116.538 106.243 1.00 28.11 N
ATOM 15 C2 C A2023 38.410 116.005 107.269 1.00 29.65 C
ATOM 16 O2 C A2023 38.238 114.819 107.602 1.00 29.28 O
ATOM 17 N3 C A2023 39.325 116.793 107.877 1.00 29.01 N
ATOM 18 C4 C A2023 39.457 118.071 107.510 1.00 28.81 C
ATOM 19 N4 C A2023 40.379 118.811 108.129 1.00 28.19 N
ATOM 20 C5 C A2023 38.651 118.646 106.490 1.00 27.92 C
ATOM 21 C6 C A2023 37.759 117.853 105.890 1.00 28.01 C
ATOM 22 P U A2024 32.086 116.406 106.998 1.00 28.85 P
ATOM 23 OP1 U A2024 30.751 115.823 106.707 1.00 29.44 O
ATOM 24 OP2 U A2024 32.227 117.878 107.123 1.00 28.23 O
ATOM 25 O5' U A2024 32.653 115.734 108.328 1.00 28.87 O
TER
ATOM 1 O3' G B2021 40.311 124.000 107.296 1.00 29.25 O
ATOM 2 P U B2022 40.039 122.507 106.760 1.00 28.32 P
ATOM 3 OP1 U B2022 39.585 121.695 107.899 1.00 30.75 O
ATOM 4 OP2 U B2022 41.235 122.076 105.994 1.00 31.50 O
ATOM 5 O5' U B2022 38.851 122.670 105.718 1.00 28.28 O
ATOM 6 C5' U B2022 37.553 123.109 106.118 1.00 30.09 C
ATOM 7 C4' U B2022 36.583 122.930 104.977 1.00 31.29 C
ATOM 8 O4' U B2022 36.984 123.785 103.865 1.00 31.24 O
ATOM 9 C3' U B2022 36.484 121.514 104.411 1.00 32.02 C
ATOM 10 O3' U B2022 35.145 121.248 104.045 1.00 32.95 O
ATOM 11 C2' U B2022 37.359 121.580 103.165 1.00 32.45 C
ATOM 12 O2' U B2022 37.003 120.657 102.152 1.00 35.00 O
ATOM 13 C1' U B2022 37.093 123.004 102.692 1.00 29.53 C
ATOM 14 N1 U B2022 38.180 123.523 101.853 1.00 28.67 N
ATOM 15 C2 U B2022 37.899 123.770 100.518 1.00 27.61 C
ATOM 16 O2 U B2022 36.787 123.679 100.048 1.00 24.87 O
ATOM 17 N3 U B2022 38.981 124.143 99.758 1.00 27.19 N
ATOM 18 C4 U B2022 40.279 124.315 100.194 1.00 26.84 C
ATOM 19 O4 U B2022 41.158 124.566 99.376 1.00 28.34 O
ATOM 20 C5 U B2022 40.476 124.103 101.594 1.00 24.77 C
ATOM 21 C6 U B2022 39.448 123.724 102.357 1.00 27.77 C
ATOM 22 P C B2023 34.253 120.293 104.971 1.00 32.07 P
ATOM 23 OP1 C B2023 32.928 120.185 104.327 1.00 35.12 O
ATOM 24 OP2 C B2023 34.348 120.775 106.362 1.00 31.96 O
ATOM 25 O5' C B2023 34.965 118.874 104.865 1.00 30.78 O
TER
Atoms:
C2: (38.410,116.005,107.269)
OP1: (32.928,120.185,104.327)
OP2: (34.348,120.775,106.362)
C4: (39.457,118.071,107.510)
O5': (34.965,118.874,104.865)
C3': (34.427,116.305,105.813)
C1': (36.683,115.655,105.536)
O4': (36.279,116.303,104.349)
C5': (34.535,117.908,103.887)
P: (34.253,120.293,104.971)
O2: (38.238,114.819,107.602)
C4': (34.849,116.521,104.373)
C2': (35.422,115.268,106.313)
O2': (35.064,113.956,105.957)
N1: (37.628,116.538,106.243)
N3: (39.325,116.793,107.877)
N4: (40.379,118.811,108.129)
C6: (37.759,117.853,105.890)
C5: (38.651,118.646,106.490)
O3': (33.073,115.866,105.851)
OP1: (32.928,120.185,104.327)
OP2: (34.348,120.775,106.362)
C4: (39.457,118.071,107.510)
O5': (34.965,118.874,104.865)
C3': (34.427,116.305,105.813)
C1': (36.683,115.655,105.536)
O4': (36.279,116.303,104.349)
C5': (34.535,117.908,103.887)
P: (34.253,120.293,104.971)
O2: (38.238,114.819,107.602)
C4': (34.849,116.521,104.373)
C2': (35.422,115.268,106.313)
O2': (35.064,113.956,105.957)
N1: (37.628,116.538,106.243)
N3: (39.325,116.793,107.877)
N4: (40.379,118.811,108.129)
C6: (37.759,117.853,105.890)
C5: (38.651,118.646,106.490)
O3': (33.073,115.866,105.851)
C4: (40.279,124.315,100.194)
N3: (38.981,124.143,99.758)
OP1: (39.585,121.695,107.899)
OP2: (41.235,122.076,105.994)
C2: (37.899,123.770,100.518)
C1': (37.093,123.004,102.692)
C3': (36.484,121.514,104.411)
O5': (38.851,122.670,105.718)
O4': (36.984,123.785,103.865)
C5': (37.553,123.109,106.118)
P: (40.039,122.507,106.760)
C4': (36.583,122.930,104.977)
C2': (37.359,121.580,103.165)
O2': (37.003,120.657,102.152)
N1: (38.180,123.523,101.853)
O4: (41.158,124.566,99.376)
O2: (36.787,123.679,100.048)
C6: (39.448,123.724,102.357)
C5: (40.476,124.103,101.594)
O3': (35.145,121.248,104.045)
N3: (38.981,124.143,99.758)
OP1: (39.585,121.695,107.899)
OP2: (41.235,122.076,105.994)
C2: (37.899,123.770,100.518)
C1': (37.093,123.004,102.692)
C3': (36.484,121.514,104.411)
O5': (38.851,122.670,105.718)
O4': (36.984,123.785,103.865)
C5': (37.553,123.109,106.118)
P: (40.039,122.507,106.760)
C4': (36.583,122.930,104.977)
C2': (37.359,121.580,103.165)
O2': (37.003,120.657,102.152)
N1: (38.180,123.523,101.853)
O4: (41.158,124.566,99.376)
O2: (36.787,123.679,100.048)
C6: (39.448,123.724,102.357)
C5: (40.476,124.103,101.594)
O3': (35.145,121.248,104.045)
Image (generated by PyMOL):