Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A2023:A2022
Extra
PDB:
ATOM 1 O3' U A2022 35.564 121.839 104.507 1.00 36.65 O
ATOM 2 P C A2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 3 OP1 C A2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 4 OP2 C A2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 5 O5' C A2023 35.346 119.469 105.327 1.00 34.41 O
ATOM 6 C5' C A2023 34.822 118.501 104.412 1.00 34.57 C
ATOM 7 C4' C A2023 35.114 117.110 104.910 1.00 33.74 C
ATOM 8 O4' C A2023 36.542 116.900 104.905 1.00 32.18 O
ATOM 9 C3' C A2023 34.665 116.907 106.336 1.00 33.09 C
ATOM 10 O3' C A2023 33.320 116.419 106.363 1.00 34.46 O
ATOM 11 C2' C A2023 35.683 115.918 106.893 1.00 33.32 C
ATOM 12 O2' C A2023 35.324 114.570 106.678 1.00 32.66 O
ATOM 13 C1' C A2023 36.939 116.248 106.086 1.00 33.27 C
ATOM 14 N1 C A2023 37.915 117.111 106.770 1.00 36.15 N
ATOM 15 C2 C A2023 38.776 116.560 107.726 1.00 37.15 C
ATOM 16 O2 C A2023 38.731 115.344 107.954 1.00 40.15 O
ATOM 17 N3 C A2023 39.649 117.369 108.362 1.00 36.63 N
ATOM 18 C4 C A2023 39.701 118.668 108.058 1.00 37.24 C
ATOM 19 N4 C A2023 40.567 119.429 108.708 1.00 37.67 N
ATOM 20 C5 C A2023 38.859 119.245 107.075 1.00 37.32 C
ATOM 21 C6 C A2023 37.985 118.441 106.468 1.00 37.20 C
ATOM 22 P U A2024 32.323 116.919 107.510 1.00 37.04 P
ATOM 23 OP1 U A2024 30.947 116.403 107.284 1.00 35.59 O
ATOM 24 OP2 U A2024 32.557 118.374 107.598 1.00 39.31 O
ATOM 25 O5' U A2024 32.914 116.249 108.824 1.00 33.39 O
TER
ATOM 1 O3' G B2021 40.629 124.521 107.683 1.00 37.71 O
ATOM 2 P U B2022 40.469 123.052 107.076 1.00 39.34 P
ATOM 3 OP1 U B2022 40.045 122.215 108.203 1.00 39.15 O
ATOM 4 OP2 U B2022 41.673 122.679 106.300 1.00 38.38 O
ATOM 5 O5' U B2022 39.281 123.184 106.025 1.00 39.17 O
ATOM 6 C5' U B2022 38.022 123.739 106.409 1.00 38.57 C
ATOM 7 C4' U B2022 37.005 123.524 105.330 1.00 37.86 C
ATOM 8 O4' U B2022 37.307 124.370 104.203 1.00 37.73 O
ATOM 9 C3' U B2022 36.913 122.099 104.807 1.00 38.43 C
ATOM 10 O3' U B2022 35.564 121.839 104.507 1.00 36.65 O
ATOM 11 C2' U B2022 37.672 122.154 103.488 1.00 38.17 C
ATOM 12 O2' U B2022 37.211 121.229 102.515 1.00 39.26 O
ATOM 13 C1' U B2022 37.395 123.585 103.039 1.00 37.48 C
ATOM 14 N1 U B2022 38.483 124.098 102.205 1.00 37.96 N
ATOM 15 C2 U B2022 38.198 124.416 100.892 1.00 36.45 C
ATOM 16 O2 U B2022 37.077 124.365 100.427 1.00 34.55 O
ATOM 17 N3 U B2022 39.284 124.796 100.148 1.00 34.73 N
ATOM 18 C4 U B2022 40.589 124.898 100.582 1.00 35.42 C
ATOM 19 O4 U B2022 41.477 125.113 99.764 1.00 36.60 O
ATOM 20 C5 U B2022 40.786 124.601 101.963 1.00 36.11 C
ATOM 21 C6 U B2022 39.755 124.222 102.706 1.00 38.00 C
ATOM 22 P C B2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 23 OP1 C B2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 24 OP2 C B2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 25 O5' C B2023 35.346 119.469 105.327 1.00 34.41 O
TER
ATOM 2 P C A2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 3 OP1 C A2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 4 OP2 C A2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 5 O5' C A2023 35.346 119.469 105.327 1.00 34.41 O
ATOM 6 C5' C A2023 34.822 118.501 104.412 1.00 34.57 C
ATOM 7 C4' C A2023 35.114 117.110 104.910 1.00 33.74 C
ATOM 8 O4' C A2023 36.542 116.900 104.905 1.00 32.18 O
ATOM 9 C3' C A2023 34.665 116.907 106.336 1.00 33.09 C
ATOM 10 O3' C A2023 33.320 116.419 106.363 1.00 34.46 O
ATOM 11 C2' C A2023 35.683 115.918 106.893 1.00 33.32 C
ATOM 12 O2' C A2023 35.324 114.570 106.678 1.00 32.66 O
ATOM 13 C1' C A2023 36.939 116.248 106.086 1.00 33.27 C
ATOM 14 N1 C A2023 37.915 117.111 106.770 1.00 36.15 N
ATOM 15 C2 C A2023 38.776 116.560 107.726 1.00 37.15 C
ATOM 16 O2 C A2023 38.731 115.344 107.954 1.00 40.15 O
ATOM 17 N3 C A2023 39.649 117.369 108.362 1.00 36.63 N
ATOM 18 C4 C A2023 39.701 118.668 108.058 1.00 37.24 C
ATOM 19 N4 C A2023 40.567 119.429 108.708 1.00 37.67 N
ATOM 20 C5 C A2023 38.859 119.245 107.075 1.00 37.32 C
ATOM 21 C6 C A2023 37.985 118.441 106.468 1.00 37.20 C
ATOM 22 P U A2024 32.323 116.919 107.510 1.00 37.04 P
ATOM 23 OP1 U A2024 30.947 116.403 107.284 1.00 35.59 O
ATOM 24 OP2 U A2024 32.557 118.374 107.598 1.00 39.31 O
ATOM 25 O5' U A2024 32.914 116.249 108.824 1.00 33.39 O
TER
ATOM 1 O3' G B2021 40.629 124.521 107.683 1.00 37.71 O
ATOM 2 P U B2022 40.469 123.052 107.076 1.00 39.34 P
ATOM 3 OP1 U B2022 40.045 122.215 108.203 1.00 39.15 O
ATOM 4 OP2 U B2022 41.673 122.679 106.300 1.00 38.38 O
ATOM 5 O5' U B2022 39.281 123.184 106.025 1.00 39.17 O
ATOM 6 C5' U B2022 38.022 123.739 106.409 1.00 38.57 C
ATOM 7 C4' U B2022 37.005 123.524 105.330 1.00 37.86 C
ATOM 8 O4' U B2022 37.307 124.370 104.203 1.00 37.73 O
ATOM 9 C3' U B2022 36.913 122.099 104.807 1.00 38.43 C
ATOM 10 O3' U B2022 35.564 121.839 104.507 1.00 36.65 O
ATOM 11 C2' U B2022 37.672 122.154 103.488 1.00 38.17 C
ATOM 12 O2' U B2022 37.211 121.229 102.515 1.00 39.26 O
ATOM 13 C1' U B2022 37.395 123.585 103.039 1.00 37.48 C
ATOM 14 N1 U B2022 38.483 124.098 102.205 1.00 37.96 N
ATOM 15 C2 U B2022 38.198 124.416 100.892 1.00 36.45 C
ATOM 16 O2 U B2022 37.077 124.365 100.427 1.00 34.55 O
ATOM 17 N3 U B2022 39.284 124.796 100.148 1.00 34.73 N
ATOM 18 C4 U B2022 40.589 124.898 100.582 1.00 35.42 C
ATOM 19 O4 U B2022 41.477 125.113 99.764 1.00 36.60 O
ATOM 20 C5 U B2022 40.786 124.601 101.963 1.00 36.11 C
ATOM 21 C6 U B2022 39.755 124.222 102.706 1.00 38.00 C
ATOM 22 P C B2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 23 OP1 C B2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 24 OP2 C B2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 25 O5' C B2023 35.346 119.469 105.327 1.00 34.41 O
TER
Atoms:
C2: (38.776,116.560,107.726)
OP1: (33.378,120.914,104.815)
OP2: (34.802,121.333,106.880)
C4: (39.701,118.668,108.058)
O5': (35.346,119.469,105.327)
C3': (34.665,116.907,106.336)
C1': (36.939,116.248,106.086)
O4': (36.542,116.900,104.905)
C5': (34.822,118.501,104.412)
P: (34.692,120.911,105.469)
O2: (38.731,115.344,107.954)
C4': (35.114,117.110,104.910)
C2': (35.683,115.918,106.893)
O2': (35.324,114.570,106.678)
N1: (37.915,117.111,106.770)
N3: (39.649,117.369,108.362)
N4: (40.567,119.429,108.708)
C6: (37.985,118.441,106.468)
C5: (38.859,119.245,107.075)
O3': (33.320,116.419,106.363)
OP1: (33.378,120.914,104.815)
OP2: (34.802,121.333,106.880)
C4: (39.701,118.668,108.058)
O5': (35.346,119.469,105.327)
C3': (34.665,116.907,106.336)
C1': (36.939,116.248,106.086)
O4': (36.542,116.900,104.905)
C5': (34.822,118.501,104.412)
P: (34.692,120.911,105.469)
O2: (38.731,115.344,107.954)
C4': (35.114,117.110,104.910)
C2': (35.683,115.918,106.893)
O2': (35.324,114.570,106.678)
N1: (37.915,117.111,106.770)
N3: (39.649,117.369,108.362)
N4: (40.567,119.429,108.708)
C6: (37.985,118.441,106.468)
C5: (38.859,119.245,107.075)
O3': (33.320,116.419,106.363)
C4: (40.589,124.898,100.582)
N3: (39.284,124.796,100.148)
OP1: (40.045,122.215,108.203)
OP2: (41.673,122.679,106.300)
C2: (38.198,124.416,100.892)
C1': (37.395,123.585,103.039)
C3': (36.913,122.099,104.807)
O5': (39.281,123.184,106.025)
O4': (37.307,124.370,104.203)
C5': (38.022,123.739,106.409)
P: (40.469,123.052,107.076)
C4': (37.005,123.524,105.330)
C2': (37.672,122.154,103.488)
O2': (37.211,121.229,102.515)
N1: (38.483,124.098,102.205)
O4: (41.477,125.113,99.764)
O2: (37.077,124.365,100.427)
C6: (39.755,124.222,102.706)
C5: (40.786,124.601,101.963)
O3': (35.564,121.839,104.507)
N3: (39.284,124.796,100.148)
OP1: (40.045,122.215,108.203)
OP2: (41.673,122.679,106.300)
C2: (38.198,124.416,100.892)
C1': (37.395,123.585,103.039)
C3': (36.913,122.099,104.807)
O5': (39.281,123.184,106.025)
O4': (37.307,124.370,104.203)
C5': (38.022,123.739,106.409)
P: (40.469,123.052,107.076)
C4': (37.005,123.524,105.330)
C2': (37.672,122.154,103.488)
O2': (37.211,121.229,102.515)
N1: (38.483,124.098,102.205)
O4: (41.477,125.113,99.764)
O2: (37.077,124.365,100.427)
C6: (39.755,124.222,102.706)
C5: (40.786,124.601,101.963)
O3': (35.564,121.839,104.507)
Image (generated by PyMOL):