Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1N8R:A2023:A2022
Extra
PDB:
ATOM 1 O3' U A2022 35.556 122.251 104.536 1.00 25.13 O
ATOM 2 P C A2023 34.666 121.270 105.439 1.00 27.75 P
ATOM 3 OP1 C A2023 33.346 121.242 104.773 1.00 26.91 O
ATOM 4 OP2 C A2023 34.769 121.710 106.848 1.00 25.78 O
ATOM 5 O5' C A2023 35.372 119.849 105.311 1.00 24.74 O
ATOM 6 C5' C A2023 34.879 118.867 104.392 1.00 25.56 C
ATOM 7 C4' C A2023 35.190 117.488 104.904 1.00 26.11 C
ATOM 8 O4' C A2023 36.614 117.236 104.846 1.00 27.37 O
ATOM 9 C3' C A2023 34.797 117.277 106.349 1.00 26.68 C
ATOM 10 O3' C A2023 33.443 116.846 106.358 1.00 28.21 O
ATOM 11 C2' C A2023 35.770 116.200 106.812 1.00 26.73 C
ATOM 12 O2' C A2023 35.375 114.905 106.446 1.00 26.18 O
ATOM 13 C1' C A2023 37.027 116.555 106.017 1.00 27.01 C
ATOM 14 N1 C A2023 37.986 117.421 106.737 1.00 28.05 N
ATOM 15 C2 C A2023 38.814 116.861 107.717 1.00 27.89 C
ATOM 16 O2 C A2023 38.693 115.662 107.994 1.00 28.43 O
ATOM 17 N3 C A2023 39.720 117.648 108.336 1.00 27.38 N
ATOM 18 C4 C A2023 39.812 118.942 108.017 1.00 27.11 C
ATOM 19 N4 C A2023 40.736 119.676 108.634 1.00 28.59 N
ATOM 20 C5 C A2023 38.967 119.540 107.049 1.00 26.85 C
ATOM 21 C6 C A2023 38.078 118.756 106.441 1.00 27.75 C
ATOM 22 P U A2024 32.454 117.288 107.548 1.00 30.58 P
ATOM 23 OP1 U A2024 31.143 116.695 107.200 1.00 30.78 O
ATOM 24 OP2 U A2024 32.566 118.758 107.775 1.00 31.89 O
ATOM 25 O5' U A2024 33.016 116.571 108.850 1.00 27.58 O
TER
ATOM 1 O3' G B2021 40.691 124.937 107.641 1.00 24.80 O
ATOM 2 P U B2022 40.556 123.432 107.102 1.00 26.94 P
ATOM 3 OP1 U B2022 40.151 122.633 108.271 1.00 26.39 O
ATOM 4 OP2 U B2022 41.759 123.051 106.337 1.00 26.53 O
ATOM 5 O5' U B2022 39.357 123.490 106.059 1.00 26.67 O
ATOM 6 C5' U B2022 38.125 124.150 106.394 1.00 24.20 C
ATOM 7 C4' U B2022 37.084 123.897 105.321 1.00 25.31 C
ATOM 8 O4' U B2022 37.372 124.682 104.130 1.00 24.73 O
ATOM 9 C3' U B2022 36.922 122.454 104.850 1.00 25.29 C
ATOM 10 O3' U B2022 35.556 122.251 104.536 1.00 25.13 O
ATOM 11 C2' U B2022 37.741 122.436 103.564 1.00 26.41 C
ATOM 12 O2' U B2022 37.359 121.448 102.628 1.00 27.89 O
ATOM 13 C1' U B2022 37.456 123.829 103.011 1.00 25.20 C
ATOM 14 N1 U B2022 38.538 124.315 102.151 1.00 26.03 N
ATOM 15 C2 U B2022 38.252 124.617 100.832 1.00 25.41 C
ATOM 16 O2 U B2022 37.135 124.542 100.353 1.00 23.09 O
ATOM 17 N3 U B2022 39.336 125.011 100.093 1.00 25.72 N
ATOM 18 C4 U B2022 40.636 125.123 100.533 1.00 25.46 C
ATOM 19 O4 U B2022 41.530 125.358 99.727 1.00 28.39 O
ATOM 20 C5 U B2022 40.827 124.827 101.908 1.00 25.90 C
ATOM 21 C6 U B2022 39.804 124.446 102.649 1.00 25.38 C
ATOM 22 P C B2023 34.666 121.270 105.439 1.00 27.75 P
ATOM 23 OP1 C B2023 33.346 121.242 104.773 1.00 26.91 O
ATOM 24 OP2 C B2023 34.769 121.710 106.848 1.00 25.78 O
ATOM 25 O5' C B2023 35.372 119.849 105.311 1.00 24.74 O
TER
ATOM 2 P C A2023 34.666 121.270 105.439 1.00 27.75 P
ATOM 3 OP1 C A2023 33.346 121.242 104.773 1.00 26.91 O
ATOM 4 OP2 C A2023 34.769 121.710 106.848 1.00 25.78 O
ATOM 5 O5' C A2023 35.372 119.849 105.311 1.00 24.74 O
ATOM 6 C5' C A2023 34.879 118.867 104.392 1.00 25.56 C
ATOM 7 C4' C A2023 35.190 117.488 104.904 1.00 26.11 C
ATOM 8 O4' C A2023 36.614 117.236 104.846 1.00 27.37 O
ATOM 9 C3' C A2023 34.797 117.277 106.349 1.00 26.68 C
ATOM 10 O3' C A2023 33.443 116.846 106.358 1.00 28.21 O
ATOM 11 C2' C A2023 35.770 116.200 106.812 1.00 26.73 C
ATOM 12 O2' C A2023 35.375 114.905 106.446 1.00 26.18 O
ATOM 13 C1' C A2023 37.027 116.555 106.017 1.00 27.01 C
ATOM 14 N1 C A2023 37.986 117.421 106.737 1.00 28.05 N
ATOM 15 C2 C A2023 38.814 116.861 107.717 1.00 27.89 C
ATOM 16 O2 C A2023 38.693 115.662 107.994 1.00 28.43 O
ATOM 17 N3 C A2023 39.720 117.648 108.336 1.00 27.38 N
ATOM 18 C4 C A2023 39.812 118.942 108.017 1.00 27.11 C
ATOM 19 N4 C A2023 40.736 119.676 108.634 1.00 28.59 N
ATOM 20 C5 C A2023 38.967 119.540 107.049 1.00 26.85 C
ATOM 21 C6 C A2023 38.078 118.756 106.441 1.00 27.75 C
ATOM 22 P U A2024 32.454 117.288 107.548 1.00 30.58 P
ATOM 23 OP1 U A2024 31.143 116.695 107.200 1.00 30.78 O
ATOM 24 OP2 U A2024 32.566 118.758 107.775 1.00 31.89 O
ATOM 25 O5' U A2024 33.016 116.571 108.850 1.00 27.58 O
TER
ATOM 1 O3' G B2021 40.691 124.937 107.641 1.00 24.80 O
ATOM 2 P U B2022 40.556 123.432 107.102 1.00 26.94 P
ATOM 3 OP1 U B2022 40.151 122.633 108.271 1.00 26.39 O
ATOM 4 OP2 U B2022 41.759 123.051 106.337 1.00 26.53 O
ATOM 5 O5' U B2022 39.357 123.490 106.059 1.00 26.67 O
ATOM 6 C5' U B2022 38.125 124.150 106.394 1.00 24.20 C
ATOM 7 C4' U B2022 37.084 123.897 105.321 1.00 25.31 C
ATOM 8 O4' U B2022 37.372 124.682 104.130 1.00 24.73 O
ATOM 9 C3' U B2022 36.922 122.454 104.850 1.00 25.29 C
ATOM 10 O3' U B2022 35.556 122.251 104.536 1.00 25.13 O
ATOM 11 C2' U B2022 37.741 122.436 103.564 1.00 26.41 C
ATOM 12 O2' U B2022 37.359 121.448 102.628 1.00 27.89 O
ATOM 13 C1' U B2022 37.456 123.829 103.011 1.00 25.20 C
ATOM 14 N1 U B2022 38.538 124.315 102.151 1.00 26.03 N
ATOM 15 C2 U B2022 38.252 124.617 100.832 1.00 25.41 C
ATOM 16 O2 U B2022 37.135 124.542 100.353 1.00 23.09 O
ATOM 17 N3 U B2022 39.336 125.011 100.093 1.00 25.72 N
ATOM 18 C4 U B2022 40.636 125.123 100.533 1.00 25.46 C
ATOM 19 O4 U B2022 41.530 125.358 99.727 1.00 28.39 O
ATOM 20 C5 U B2022 40.827 124.827 101.908 1.00 25.90 C
ATOM 21 C6 U B2022 39.804 124.446 102.649 1.00 25.38 C
ATOM 22 P C B2023 34.666 121.270 105.439 1.00 27.75 P
ATOM 23 OP1 C B2023 33.346 121.242 104.773 1.00 26.91 O
ATOM 24 OP2 C B2023 34.769 121.710 106.848 1.00 25.78 O
ATOM 25 O5' C B2023 35.372 119.849 105.311 1.00 24.74 O
TER
Atoms:
C2: (38.814,116.861,107.717)
OP1: (33.346,121.242,104.773)
OP2: (34.769,121.710,106.848)
C4: (39.812,118.942,108.017)
O5': (35.372,119.849,105.311)
C3': (34.797,117.277,106.349)
C1': (37.027,116.555,106.017)
O4': (36.614,117.236,104.846)
C5': (34.879,118.867,104.392)
P: (34.666,121.270,105.439)
O2: (38.693,115.662,107.994)
C4': (35.190,117.488,104.904)
C2': (35.770,116.200,106.812)
O2': (35.375,114.905,106.446)
N1: (37.986,117.421,106.737)
N3: (39.720,117.648,108.336)
N4: (40.736,119.676,108.634)
C6: (38.078,118.756,106.441)
C5: (38.967,119.540,107.049)
O3': (33.443,116.846,106.358)
OP1: (33.346,121.242,104.773)
OP2: (34.769,121.710,106.848)
C4: (39.812,118.942,108.017)
O5': (35.372,119.849,105.311)
C3': (34.797,117.277,106.349)
C1': (37.027,116.555,106.017)
O4': (36.614,117.236,104.846)
C5': (34.879,118.867,104.392)
P: (34.666,121.270,105.439)
O2: (38.693,115.662,107.994)
C4': (35.190,117.488,104.904)
C2': (35.770,116.200,106.812)
O2': (35.375,114.905,106.446)
N1: (37.986,117.421,106.737)
N3: (39.720,117.648,108.336)
N4: (40.736,119.676,108.634)
C6: (38.078,118.756,106.441)
C5: (38.967,119.540,107.049)
O3': (33.443,116.846,106.358)
C4: (40.636,125.123,100.533)
N3: (39.336,125.011,100.093)
OP1: (40.151,122.633,108.271)
OP2: (41.759,123.051,106.337)
C2: (38.252,124.617,100.832)
C1': (37.456,123.829,103.011)
C3': (36.922,122.454,104.850)
O5': (39.357,123.490,106.059)
O4': (37.372,124.682,104.130)
C5': (38.125,124.150,106.394)
P: (40.556,123.432,107.102)
C4': (37.084,123.897,105.321)
C2': (37.741,122.436,103.564)
O2': (37.359,121.448,102.628)
N1: (38.538,124.315,102.151)
O4: (41.530,125.358,99.727)
O2: (37.135,124.542,100.353)
C6: (39.804,124.446,102.649)
C5: (40.827,124.827,101.908)
O3': (35.556,122.251,104.536)
N3: (39.336,125.011,100.093)
OP1: (40.151,122.633,108.271)
OP2: (41.759,123.051,106.337)
C2: (38.252,124.617,100.832)
C1': (37.456,123.829,103.011)
C3': (36.922,122.454,104.850)
O5': (39.357,123.490,106.059)
O4': (37.372,124.682,104.130)
C5': (38.125,124.150,106.394)
P: (40.556,123.432,107.102)
C4': (37.084,123.897,105.321)
C2': (37.741,122.436,103.564)
O2': (37.359,121.448,102.628)
N1: (38.538,124.315,102.151)
O4: (41.530,125.358,99.727)
O2: (37.135,124.542,100.353)
C6: (39.804,124.446,102.649)
C5: (40.827,124.827,101.908)
O3': (35.556,122.251,104.536)
Image (generated by PyMOL):