Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01003:0613
Extra
PDB:
ATOM 1 O3' C A1002 53.790 94.465 85.043 1.00 41.33 O
ATOM 2 P C A1003 54.951 95.575 85.151 1.00 40.08 P
ATOM 3 OP1 C A1003 55.573 95.744 83.825 1.00 38.64 O
ATOM 4 OP2 C A1003 55.785 95.161 86.308 1.00 44.06 O
ATOM 5 O5' C A1003 54.218 96.941 85.532 1.00 38.93 O
ATOM 6 C5' C A1003 53.335 97.026 86.656 1.00 38.29 C
ATOM 7 C4' C A1003 54.075 97.477 87.907 1.00 39.15 C
ATOM 8 O4' C A1003 54.546 98.857 87.779 1.00 40.16 O
ATOM 9 C3' C A1003 53.188 97.462 89.157 1.00 37.93 C
ATOM 10 O3' C A1003 53.957 97.145 90.309 1.00 36.33 O
ATOM 11 C2' C A1003 52.752 98.916 89.252 1.00 38.35 C
ATOM 12 O2' C A1003 52.296 99.331 90.520 1.00 37.42 O
ATOM 13 C1' C A1003 54.054 99.609 88.875 1.00 40.52 C
ATOM 14 N1 C A1003 53.916 101.039 88.520 1.00 42.45 N
ATOM 15 C2 C A1003 54.386 102.000 89.436 1.00 43.67 C
ATOM 16 O2 C A1003 54.932 101.618 90.485 1.00 49.23 O
ATOM 17 N3 C A1003 54.236 103.313 89.161 1.00 42.59 N
ATOM 18 C4 C A1003 53.651 103.689 88.031 1.00 42.83 C
ATOM 19 N4 C A1003 53.518 104.993 87.817 1.00 43.49 N
ATOM 20 C5 C A1003 53.174 102.740 87.069 1.00 44.30 C
ATOM 21 C6 C A1003 53.329 101.436 87.350 1.00 42.68 C
ATOM 22 P G A1004 54.468 95.639 90.551 1.00 38.84 P
ATOM 23 OP1 G A1004 55.582 95.706 91.531 1.00 41.38 O
ATOM 24 OP2 G A1004 54.702 95.005 89.237 1.00 41.37 O
ATOM 25 O5' G A1004 53.297 94.884 91.337 1.00 39.80 O
TER
ATOM 1 O3' U B 612 50.425 108.035 85.833 1.00 34.72 O
ATOM 2 P U B 613 50.104 106.464 85.908 1.00 38.02 P
ATOM 3 OP1 U B 613 51.343 105.724 85.536 1.00 33.56 O
ATOM 4 OP2 U B 613 48.865 106.228 85.154 1.00 37.99 O
ATOM 5 O5' U B 613 49.775 106.193 87.451 1.00 38.88 O
ATOM 6 C5' U B 613 50.809 106.275 88.440 1.00 36.57 C
ATOM 7 C4' U B 613 50.238 106.259 89.843 1.00 38.84 C
ATOM 8 O4' U B 613 49.208 107.271 89.992 1.00 39.50 O
ATOM 9 C3' U B 613 49.518 105.023 90.369 1.00 37.06 C
ATOM 10 O3' U B 613 50.418 103.951 90.688 1.00 34.95 O
ATOM 11 C2' U B 613 48.911 105.603 91.646 1.00 36.30 C
ATOM 12 O2' U B 613 49.893 105.802 92.639 1.00 36.25 O
ATOM 13 C1' U B 613 48.468 106.992 91.176 1.00 36.62 C
ATOM 14 N1 U B 613 47.027 107.049 90.880 1.00 37.61 N
ATOM 15 C2 U B 613 46.147 107.253 91.944 1.00 36.54 C
ATOM 16 O2 U B 613 46.507 107.428 93.095 1.00 36.11 O
ATOM 17 N3 U B 613 44.822 107.242 91.604 1.00 36.27 N
ATOM 18 C4 U B 613 44.288 107.047 90.353 1.00 37.21 C
ATOM 19 O4 U B 613 43.071 107.033 90.219 1.00 38.50 O
ATOM 20 C5 U B 613 45.249 106.869 89.310 1.00 36.50 C
ATOM 21 C6 U B 613 46.551 106.881 89.599 1.00 36.06 C
ATOM 22 P U B 614 50.010 102.426 90.343 1.00 33.85 P
ATOM 23 OP1 U B 614 51.174 101.529 90.518 1.00 33.70 O
ATOM 24 OP2 U B 614 49.296 102.420 89.052 1.00 33.81 O
ATOM 25 O5' U B 614 48.963 102.063 91.480 1.00 35.27 O
TER
ATOM 2 P C A1003 54.951 95.575 85.151 1.00 40.08 P
ATOM 3 OP1 C A1003 55.573 95.744 83.825 1.00 38.64 O
ATOM 4 OP2 C A1003 55.785 95.161 86.308 1.00 44.06 O
ATOM 5 O5' C A1003 54.218 96.941 85.532 1.00 38.93 O
ATOM 6 C5' C A1003 53.335 97.026 86.656 1.00 38.29 C
ATOM 7 C4' C A1003 54.075 97.477 87.907 1.00 39.15 C
ATOM 8 O4' C A1003 54.546 98.857 87.779 1.00 40.16 O
ATOM 9 C3' C A1003 53.188 97.462 89.157 1.00 37.93 C
ATOM 10 O3' C A1003 53.957 97.145 90.309 1.00 36.33 O
ATOM 11 C2' C A1003 52.752 98.916 89.252 1.00 38.35 C
ATOM 12 O2' C A1003 52.296 99.331 90.520 1.00 37.42 O
ATOM 13 C1' C A1003 54.054 99.609 88.875 1.00 40.52 C
ATOM 14 N1 C A1003 53.916 101.039 88.520 1.00 42.45 N
ATOM 15 C2 C A1003 54.386 102.000 89.436 1.00 43.67 C
ATOM 16 O2 C A1003 54.932 101.618 90.485 1.00 49.23 O
ATOM 17 N3 C A1003 54.236 103.313 89.161 1.00 42.59 N
ATOM 18 C4 C A1003 53.651 103.689 88.031 1.00 42.83 C
ATOM 19 N4 C A1003 53.518 104.993 87.817 1.00 43.49 N
ATOM 20 C5 C A1003 53.174 102.740 87.069 1.00 44.30 C
ATOM 21 C6 C A1003 53.329 101.436 87.350 1.00 42.68 C
ATOM 22 P G A1004 54.468 95.639 90.551 1.00 38.84 P
ATOM 23 OP1 G A1004 55.582 95.706 91.531 1.00 41.38 O
ATOM 24 OP2 G A1004 54.702 95.005 89.237 1.00 41.37 O
ATOM 25 O5' G A1004 53.297 94.884 91.337 1.00 39.80 O
TER
ATOM 1 O3' U B 612 50.425 108.035 85.833 1.00 34.72 O
ATOM 2 P U B 613 50.104 106.464 85.908 1.00 38.02 P
ATOM 3 OP1 U B 613 51.343 105.724 85.536 1.00 33.56 O
ATOM 4 OP2 U B 613 48.865 106.228 85.154 1.00 37.99 O
ATOM 5 O5' U B 613 49.775 106.193 87.451 1.00 38.88 O
ATOM 6 C5' U B 613 50.809 106.275 88.440 1.00 36.57 C
ATOM 7 C4' U B 613 50.238 106.259 89.843 1.00 38.84 C
ATOM 8 O4' U B 613 49.208 107.271 89.992 1.00 39.50 O
ATOM 9 C3' U B 613 49.518 105.023 90.369 1.00 37.06 C
ATOM 10 O3' U B 613 50.418 103.951 90.688 1.00 34.95 O
ATOM 11 C2' U B 613 48.911 105.603 91.646 1.00 36.30 C
ATOM 12 O2' U B 613 49.893 105.802 92.639 1.00 36.25 O
ATOM 13 C1' U B 613 48.468 106.992 91.176 1.00 36.62 C
ATOM 14 N1 U B 613 47.027 107.049 90.880 1.00 37.61 N
ATOM 15 C2 U B 613 46.147 107.253 91.944 1.00 36.54 C
ATOM 16 O2 U B 613 46.507 107.428 93.095 1.00 36.11 O
ATOM 17 N3 U B 613 44.822 107.242 91.604 1.00 36.27 N
ATOM 18 C4 U B 613 44.288 107.047 90.353 1.00 37.21 C
ATOM 19 O4 U B 613 43.071 107.033 90.219 1.00 38.50 O
ATOM 20 C5 U B 613 45.249 106.869 89.310 1.00 36.50 C
ATOM 21 C6 U B 613 46.551 106.881 89.599 1.00 36.06 C
ATOM 22 P U B 614 50.010 102.426 90.343 1.00 33.85 P
ATOM 23 OP1 U B 614 51.174 101.529 90.518 1.00 33.70 O
ATOM 24 OP2 U B 614 49.296 102.420 89.052 1.00 33.81 O
ATOM 25 O5' U B 614 48.963 102.063 91.480 1.00 35.27 O
TER
Atoms:
C2: (54.386,102.000,89.436)
OP1: (55.573,95.744,83.825)
OP2: (55.785,95.161,86.308)
C4: (53.651,103.689,88.031)
O5': (54.218,96.941,85.532)
C3': (53.188,97.462,89.157)
C1': (54.054,99.609,88.875)
O4': (54.546,98.857,87.779)
C5': (53.335,97.026,86.656)
P: (54.951,95.575,85.151)
O2: (54.932,101.618,90.485)
C4': (54.075,97.477,87.907)
C2': (52.752,98.916,89.252)
O2': (52.296,99.331,90.520)
N1: (53.916,101.039,88.520)
N3: (54.236,103.313,89.161)
N4: (53.518,104.993,87.817)
C6: (53.329,101.436,87.350)
C5: (53.174,102.740,87.069)
O3': (53.957,97.145,90.309)
OP1: (55.573,95.744,83.825)
OP2: (55.785,95.161,86.308)
C4: (53.651,103.689,88.031)
O5': (54.218,96.941,85.532)
C3': (53.188,97.462,89.157)
C1': (54.054,99.609,88.875)
O4': (54.546,98.857,87.779)
C5': (53.335,97.026,86.656)
P: (54.951,95.575,85.151)
O2: (54.932,101.618,90.485)
C4': (54.075,97.477,87.907)
C2': (52.752,98.916,89.252)
O2': (52.296,99.331,90.520)
N1: (53.916,101.039,88.520)
N3: (54.236,103.313,89.161)
N4: (53.518,104.993,87.817)
C6: (53.329,101.436,87.350)
C5: (53.174,102.740,87.069)
O3': (53.957,97.145,90.309)
C4: (44.288,107.047,90.353)
N3: (44.822,107.242,91.604)
OP1: (51.343,105.724,85.536)
OP2: (48.865,106.228,85.154)
C2: (46.147,107.253,91.944)
C1': (48.468,106.992,91.176)
C3': (49.518,105.023,90.369)
O5': (49.775,106.193,87.451)
O4': (49.208,107.271,89.992)
C5': (50.809,106.275,88.440)
P: (50.104,106.464,85.908)
C4': (50.238,106.259,89.843)
C2': (48.911,105.603,91.646)
O2': (49.893,105.802,92.639)
N1: (47.027,107.049,90.880)
O4: (43.071,107.033,90.219)
O2: (46.507,107.428,93.095)
C6: (46.551,106.881,89.599)
C5: (45.249,106.869,89.310)
O3': (50.418,103.951,90.688)
N3: (44.822,107.242,91.604)
OP1: (51.343,105.724,85.536)
OP2: (48.865,106.228,85.154)
C2: (46.147,107.253,91.944)
C1': (48.468,106.992,91.176)
C3': (49.518,105.023,90.369)
O5': (49.775,106.193,87.451)
O4': (49.208,107.271,89.992)
C5': (50.809,106.275,88.440)
P: (50.104,106.464,85.908)
C4': (50.238,106.259,89.843)
C2': (48.911,105.603,91.646)
O2': (49.893,105.802,92.639)
N1: (47.027,107.049,90.880)
O4: (43.071,107.033,90.219)
O2: (46.507,107.428,93.095)
C6: (46.551,106.881,89.599)
C5: (45.249,106.869,89.310)
O3': (50.418,103.951,90.688)
Image (generated by PyMOL):