Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 34.852 121.679 104.323 1.00 45.76 O
ATOM 2 P C A2023 33.980 120.777 105.322 1.00 44.56 P
ATOM 3 OP1 C A2023 32.600 120.738 104.787 1.00 46.76 O
ATOM 4 OP2 C A2023 34.209 121.278 106.693 1.00 45.28 O
ATOM 5 O5' C A2023 34.644 119.337 105.214 1.00 39.85 O
ATOM 6 C5' C A2023 34.180 118.372 104.262 1.00 39.78 C
ATOM 7 C4' C A2023 34.566 116.983 104.713 1.00 38.67 C
ATOM 8 O4' C A2023 36.005 116.834 104.675 1.00 35.39 O
ATOM 9 C3' C A2023 34.170 116.681 106.146 1.00 39.04 C
ATOM 10 O3' C A2023 32.839 116.182 106.178 1.00 39.65 O
ATOM 11 C2' C A2023 35.202 115.649 106.577 1.00 38.52 C
ATOM 12 O2' C A2023 34.864 114.343 106.159 1.00 35.02 O
ATOM 13 C1' C A2023 36.444 116.122 105.812 1.00 38.05 C
ATOM 14 N1 C A2023 37.396 116.984 106.549 1.00 40.22 N
ATOM 15 C2 C A2023 38.187 116.427 107.572 1.00 40.30 C
ATOM 16 O2 C A2023 38.006 115.246 107.908 1.00 40.37 O
ATOM 17 N3 C A2023 39.120 117.196 108.173 1.00 40.77 N
ATOM 18 C4 C A2023 39.265 118.472 107.815 1.00 39.91 C
ATOM 19 N4 C A2023 40.205 119.185 108.427 1.00 38.36 N
ATOM 20 C5 C A2023 38.453 119.072 106.814 1.00 39.66 C
ATOM 21 C6 C A2023 37.540 118.303 106.215 1.00 39.60 C
ATOM 22 P U A2024 31.814 116.713 107.285 1.00 41.27 P
ATOM 23 OP1 U A2024 30.496 116.100 106.965 1.00 41.65 O
ATOM 24 OP2 U A2024 31.938 118.183 107.386 1.00 40.50 O
ATOM 25 O5' U A2024 32.360 116.069 108.636 1.00 43.33 O
TER
ATOM 1 O3' G B2021 39.987 124.410 107.490 1.00 39.45 O
ATOM 2 P U B2022 39.795 122.912 106.943 1.00 39.84 P
ATOM 3 OP1 U B2022 39.415 122.076 108.086 1.00 41.97 O
ATOM 4 OP2 U B2022 40.995 122.555 106.155 1.00 43.33 O
ATOM 5 O5' U B2022 38.574 123.000 105.926 1.00 40.48 O
ATOM 6 C5' U B2022 37.317 123.584 106.309 1.00 43.01 C
ATOM 7 C4' U B2022 36.302 123.403 105.203 1.00 46.14 C
ATOM 8 O4' U B2022 36.650 124.252 104.067 1.00 46.09 O
ATOM 9 C3' U B2022 36.195 121.979 104.655 1.00 46.69 C
ATOM 10 O3' U B2022 34.852 121.679 104.323 1.00 45.76 O
ATOM 11 C2' U B2022 37.052 122.038 103.396 1.00 47.79 C
ATOM 12 O2' U B2022 36.725 121.081 102.406 1.00 51.96 O
ATOM 13 C1' U B2022 36.772 123.454 102.904 1.00 46.22 C
ATOM 14 N1 U B2022 37.875 123.963 102.074 1.00 45.89 N
ATOM 15 C2 U B2022 37.601 124.309 100.754 1.00 44.07 C
ATOM 16 O2 U B2022 36.487 124.296 100.277 1.00 42.19 O
ATOM 17 N3 U B2022 38.692 124.673 100.015 1.00 44.02 N
ATOM 18 C4 U B2022 39.997 124.738 100.440 1.00 44.74 C
ATOM 19 O4 U B2022 40.875 125.042 99.639 1.00 45.64 O
ATOM 20 C5 U B2022 40.196 124.425 101.822 1.00 44.84 C
ATOM 21 C6 U B2022 39.157 124.059 102.574 1.00 45.47 C
ATOM 22 P C B2023 33.980 120.777 105.322 1.00 44.56 P
ATOM 23 OP1 C B2023 32.600 120.738 104.787 1.00 46.76 O
ATOM 24 OP2 C B2023 34.209 121.278 106.693 1.00 45.28 O
ATOM 25 O5' C B2023 34.644 119.337 105.214 1.00 39.85 O
TER
ATOM 2 P C A2023 33.980 120.777 105.322 1.00 44.56 P
ATOM 3 OP1 C A2023 32.600 120.738 104.787 1.00 46.76 O
ATOM 4 OP2 C A2023 34.209 121.278 106.693 1.00 45.28 O
ATOM 5 O5' C A2023 34.644 119.337 105.214 1.00 39.85 O
ATOM 6 C5' C A2023 34.180 118.372 104.262 1.00 39.78 C
ATOM 7 C4' C A2023 34.566 116.983 104.713 1.00 38.67 C
ATOM 8 O4' C A2023 36.005 116.834 104.675 1.00 35.39 O
ATOM 9 C3' C A2023 34.170 116.681 106.146 1.00 39.04 C
ATOM 10 O3' C A2023 32.839 116.182 106.178 1.00 39.65 O
ATOM 11 C2' C A2023 35.202 115.649 106.577 1.00 38.52 C
ATOM 12 O2' C A2023 34.864 114.343 106.159 1.00 35.02 O
ATOM 13 C1' C A2023 36.444 116.122 105.812 1.00 38.05 C
ATOM 14 N1 C A2023 37.396 116.984 106.549 1.00 40.22 N
ATOM 15 C2 C A2023 38.187 116.427 107.572 1.00 40.30 C
ATOM 16 O2 C A2023 38.006 115.246 107.908 1.00 40.37 O
ATOM 17 N3 C A2023 39.120 117.196 108.173 1.00 40.77 N
ATOM 18 C4 C A2023 39.265 118.472 107.815 1.00 39.91 C
ATOM 19 N4 C A2023 40.205 119.185 108.427 1.00 38.36 N
ATOM 20 C5 C A2023 38.453 119.072 106.814 1.00 39.66 C
ATOM 21 C6 C A2023 37.540 118.303 106.215 1.00 39.60 C
ATOM 22 P U A2024 31.814 116.713 107.285 1.00 41.27 P
ATOM 23 OP1 U A2024 30.496 116.100 106.965 1.00 41.65 O
ATOM 24 OP2 U A2024 31.938 118.183 107.386 1.00 40.50 O
ATOM 25 O5' U A2024 32.360 116.069 108.636 1.00 43.33 O
TER
ATOM 1 O3' G B2021 39.987 124.410 107.490 1.00 39.45 O
ATOM 2 P U B2022 39.795 122.912 106.943 1.00 39.84 P
ATOM 3 OP1 U B2022 39.415 122.076 108.086 1.00 41.97 O
ATOM 4 OP2 U B2022 40.995 122.555 106.155 1.00 43.33 O
ATOM 5 O5' U B2022 38.574 123.000 105.926 1.00 40.48 O
ATOM 6 C5' U B2022 37.317 123.584 106.309 1.00 43.01 C
ATOM 7 C4' U B2022 36.302 123.403 105.203 1.00 46.14 C
ATOM 8 O4' U B2022 36.650 124.252 104.067 1.00 46.09 O
ATOM 9 C3' U B2022 36.195 121.979 104.655 1.00 46.69 C
ATOM 10 O3' U B2022 34.852 121.679 104.323 1.00 45.76 O
ATOM 11 C2' U B2022 37.052 122.038 103.396 1.00 47.79 C
ATOM 12 O2' U B2022 36.725 121.081 102.406 1.00 51.96 O
ATOM 13 C1' U B2022 36.772 123.454 102.904 1.00 46.22 C
ATOM 14 N1 U B2022 37.875 123.963 102.074 1.00 45.89 N
ATOM 15 C2 U B2022 37.601 124.309 100.754 1.00 44.07 C
ATOM 16 O2 U B2022 36.487 124.296 100.277 1.00 42.19 O
ATOM 17 N3 U B2022 38.692 124.673 100.015 1.00 44.02 N
ATOM 18 C4 U B2022 39.997 124.738 100.440 1.00 44.74 C
ATOM 19 O4 U B2022 40.875 125.042 99.639 1.00 45.64 O
ATOM 20 C5 U B2022 40.196 124.425 101.822 1.00 44.84 C
ATOM 21 C6 U B2022 39.157 124.059 102.574 1.00 45.47 C
ATOM 22 P C B2023 33.980 120.777 105.322 1.00 44.56 P
ATOM 23 OP1 C B2023 32.600 120.738 104.787 1.00 46.76 O
ATOM 24 OP2 C B2023 34.209 121.278 106.693 1.00 45.28 O
ATOM 25 O5' C B2023 34.644 119.337 105.214 1.00 39.85 O
TER
Atoms:
C2: (38.187,116.427,107.572)
OP1: (32.600,120.738,104.787)
OP2: (34.209,121.278,106.693)
C4: (39.265,118.472,107.815)
O5': (34.644,119.337,105.214)
C3': (34.170,116.681,106.146)
C1': (36.444,116.122,105.812)
O4': (36.005,116.834,104.675)
C5': (34.180,118.372,104.262)
P: (33.980,120.777,105.322)
O2: (38.006,115.246,107.908)
C4': (34.566,116.983,104.713)
C2': (35.202,115.649,106.577)
O2': (34.864,114.343,106.159)
N1: (37.396,116.984,106.549)
N3: (39.120,117.196,108.173)
N4: (40.205,119.185,108.427)
C6: (37.540,118.303,106.215)
C5: (38.453,119.072,106.814)
O3': (32.839,116.182,106.178)
OP1: (32.600,120.738,104.787)
OP2: (34.209,121.278,106.693)
C4: (39.265,118.472,107.815)
O5': (34.644,119.337,105.214)
C3': (34.170,116.681,106.146)
C1': (36.444,116.122,105.812)
O4': (36.005,116.834,104.675)
C5': (34.180,118.372,104.262)
P: (33.980,120.777,105.322)
O2: (38.006,115.246,107.908)
C4': (34.566,116.983,104.713)
C2': (35.202,115.649,106.577)
O2': (34.864,114.343,106.159)
N1: (37.396,116.984,106.549)
N3: (39.120,117.196,108.173)
N4: (40.205,119.185,108.427)
C6: (37.540,118.303,106.215)
C5: (38.453,119.072,106.814)
O3': (32.839,116.182,106.178)
C4: (39.997,124.738,100.440)
N3: (38.692,124.673,100.015)
OP1: (39.415,122.076,108.086)
OP2: (40.995,122.555,106.155)
C2: (37.601,124.309,100.754)
C1': (36.772,123.454,102.904)
C3': (36.195,121.979,104.655)
O5': (38.574,123.000,105.926)
O4': (36.650,124.252,104.067)
C5': (37.317,123.584,106.309)
P: (39.795,122.912,106.943)
C4': (36.302,123.403,105.203)
C2': (37.052,122.038,103.396)
O2': (36.725,121.081,102.406)
N1: (37.875,123.963,102.074)
O4: (40.875,125.042,99.639)
O2: (36.487,124.296,100.277)
C6: (39.157,124.059,102.574)
C5: (40.196,124.425,101.822)
O3': (34.852,121.679,104.323)
N3: (38.692,124.673,100.015)
OP1: (39.415,122.076,108.086)
OP2: (40.995,122.555,106.155)
C2: (37.601,124.309,100.754)
C1': (36.772,123.454,102.904)
C3': (36.195,121.979,104.655)
O5': (38.574,123.000,105.926)
O4': (36.650,124.252,104.067)
C5': (37.317,123.584,106.309)
P: (39.795,122.912,106.943)
C4': (36.302,123.403,105.203)
C2': (37.052,122.038,103.396)
O2': (36.725,121.081,102.406)
N1: (37.875,123.963,102.074)
O4: (40.875,125.042,99.639)
O2: (36.487,124.296,100.277)
C6: (39.157,124.059,102.574)
C5: (40.196,124.425,101.822)
O3': (34.852,121.679,104.323)
Image (generated by PyMOL):