Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.456 93.278 114.684 1.00 46.64 O
ATOM 2 P C A1085 43.835 93.891 115.231 1.00 46.34 P
ATOM 3 OP1 C A1085 44.878 92.900 114.888 1.00 47.52 O
ATOM 4 OP2 C A1085 43.648 94.312 116.646 1.00 47.15 O
ATOM 5 O5' C A1085 44.087 95.189 114.342 1.00 47.76 O
ATOM 6 C5' C A1085 44.112 95.107 112.905 1.00 47.17 C
ATOM 7 C4' C A1085 44.133 96.494 112.310 1.00 48.01 C
ATOM 8 O4' C A1085 42.985 97.233 112.816 1.00 48.11 O
ATOM 9 C3' C A1085 45.357 97.337 112.650 1.00 48.37 C
ATOM 10 O3' C A1085 45.645 98.204 111.556 1.00 48.33 O
ATOM 11 C2' C A1085 44.900 98.113 113.881 1.00 48.40 C
ATOM 12 O2' C A1085 45.580 99.337 114.076 1.00 48.20 O
ATOM 13 C1' C A1085 43.424 98.352 113.563 1.00 48.20 C
ATOM 14 N1 C A1085 42.571 98.458 114.761 1.00 48.22 N
ATOM 15 C2 C A1085 41.688 99.540 114.869 1.00 48.32 C
ATOM 16 O2 C A1085 41.671 100.398 113.969 1.00 50.63 O
ATOM 17 N3 C A1085 40.880 99.628 115.952 1.00 48.44 N
ATOM 18 C4 C A1085 40.938 98.695 116.908 1.00 47.14 C
ATOM 19 N4 C A1085 40.114 98.817 117.952 1.00 45.90 N
ATOM 20 C5 C A1085 41.838 97.595 116.834 1.00 47.14 C
ATOM 21 C6 C A1085 42.627 97.514 115.752 1.00 47.80 C
ATOM 22 P C A1086 47.124 98.220 110.925 1.00 49.53 P
ATOM 23 OP1 C A1086 47.063 99.015 109.669 1.00 52.08 O
ATOM 24 OP2 C A1086 47.634 96.819 110.886 1.00 48.20 O
ATOM 25 O5' C A1086 47.972 99.057 111.983 1.00 48.19 O
TER
ATOM 1 O3' A B1083 38.238 94.020 119.209 1.00 43.10 O
ATOM 2 P U B1084 39.581 94.870 119.034 1.00 42.66 P
ATOM 3 OP1 U B1084 40.623 94.291 119.928 1.00 43.03 O
ATOM 4 OP2 U B1084 39.206 96.302 119.177 1.00 40.82 O
ATOM 5 O5' U B1084 39.986 94.585 117.517 1.00 42.29 O
ATOM 6 C5' U B1084 40.264 93.239 117.073 1.00 43.43 C
ATOM 7 C4' U B1084 40.225 93.162 115.562 1.00 45.55 C
ATOM 8 O4' U B1084 38.943 93.647 115.092 1.00 47.06 O
ATOM 9 C3' U B1084 41.243 94.012 114.819 1.00 45.89 C
ATOM 10 O3' U B1084 42.456 93.278 114.684 1.00 46.64 O
ATOM 11 C2' U B1084 40.586 94.191 113.454 1.00 45.50 C
ATOM 12 O2' U B1084 40.758 93.049 112.638 1.00 46.65 O
ATOM 13 C1' U B1084 39.106 94.283 113.834 1.00 43.99 C
ATOM 14 N1 U B1084 38.538 95.637 113.918 1.00 40.65 N
ATOM 15 C2 U B1084 38.202 96.278 112.735 1.00 39.91 C
ATOM 16 O2 U B1084 38.400 95.795 111.638 1.00 40.65 O
ATOM 17 N3 U B1084 37.627 97.511 112.888 1.00 39.71 N
ATOM 18 C4 U B1084 37.364 98.159 114.077 1.00 40.11 C
ATOM 19 O4 U B1084 36.761 99.228 114.060 1.00 41.95 O
ATOM 20 C5 U B1084 37.764 97.446 115.250 1.00 40.28 C
ATOM 21 C6 U B1084 38.324 96.242 115.133 1.00 40.35 C
ATOM 22 P C B1085 43.835 93.891 115.231 1.00 46.34 P
ATOM 23 OP1 C B1085 44.878 92.900 114.888 1.00 47.52 O
ATOM 24 OP2 C B1085 43.648 94.312 116.646 1.00 47.15 O
ATOM 25 O5' C B1085 44.087 95.189 114.342 1.00 47.76 O
TER
ATOM 2 P C A1085 43.835 93.891 115.231 1.00 46.34 P
ATOM 3 OP1 C A1085 44.878 92.900 114.888 1.00 47.52 O
ATOM 4 OP2 C A1085 43.648 94.312 116.646 1.00 47.15 O
ATOM 5 O5' C A1085 44.087 95.189 114.342 1.00 47.76 O
ATOM 6 C5' C A1085 44.112 95.107 112.905 1.00 47.17 C
ATOM 7 C4' C A1085 44.133 96.494 112.310 1.00 48.01 C
ATOM 8 O4' C A1085 42.985 97.233 112.816 1.00 48.11 O
ATOM 9 C3' C A1085 45.357 97.337 112.650 1.00 48.37 C
ATOM 10 O3' C A1085 45.645 98.204 111.556 1.00 48.33 O
ATOM 11 C2' C A1085 44.900 98.113 113.881 1.00 48.40 C
ATOM 12 O2' C A1085 45.580 99.337 114.076 1.00 48.20 O
ATOM 13 C1' C A1085 43.424 98.352 113.563 1.00 48.20 C
ATOM 14 N1 C A1085 42.571 98.458 114.761 1.00 48.22 N
ATOM 15 C2 C A1085 41.688 99.540 114.869 1.00 48.32 C
ATOM 16 O2 C A1085 41.671 100.398 113.969 1.00 50.63 O
ATOM 17 N3 C A1085 40.880 99.628 115.952 1.00 48.44 N
ATOM 18 C4 C A1085 40.938 98.695 116.908 1.00 47.14 C
ATOM 19 N4 C A1085 40.114 98.817 117.952 1.00 45.90 N
ATOM 20 C5 C A1085 41.838 97.595 116.834 1.00 47.14 C
ATOM 21 C6 C A1085 42.627 97.514 115.752 1.00 47.80 C
ATOM 22 P C A1086 47.124 98.220 110.925 1.00 49.53 P
ATOM 23 OP1 C A1086 47.063 99.015 109.669 1.00 52.08 O
ATOM 24 OP2 C A1086 47.634 96.819 110.886 1.00 48.20 O
ATOM 25 O5' C A1086 47.972 99.057 111.983 1.00 48.19 O
TER
ATOM 1 O3' A B1083 38.238 94.020 119.209 1.00 43.10 O
ATOM 2 P U B1084 39.581 94.870 119.034 1.00 42.66 P
ATOM 3 OP1 U B1084 40.623 94.291 119.928 1.00 43.03 O
ATOM 4 OP2 U B1084 39.206 96.302 119.177 1.00 40.82 O
ATOM 5 O5' U B1084 39.986 94.585 117.517 1.00 42.29 O
ATOM 6 C5' U B1084 40.264 93.239 117.073 1.00 43.43 C
ATOM 7 C4' U B1084 40.225 93.162 115.562 1.00 45.55 C
ATOM 8 O4' U B1084 38.943 93.647 115.092 1.00 47.06 O
ATOM 9 C3' U B1084 41.243 94.012 114.819 1.00 45.89 C
ATOM 10 O3' U B1084 42.456 93.278 114.684 1.00 46.64 O
ATOM 11 C2' U B1084 40.586 94.191 113.454 1.00 45.50 C
ATOM 12 O2' U B1084 40.758 93.049 112.638 1.00 46.65 O
ATOM 13 C1' U B1084 39.106 94.283 113.834 1.00 43.99 C
ATOM 14 N1 U B1084 38.538 95.637 113.918 1.00 40.65 N
ATOM 15 C2 U B1084 38.202 96.278 112.735 1.00 39.91 C
ATOM 16 O2 U B1084 38.400 95.795 111.638 1.00 40.65 O
ATOM 17 N3 U B1084 37.627 97.511 112.888 1.00 39.71 N
ATOM 18 C4 U B1084 37.364 98.159 114.077 1.00 40.11 C
ATOM 19 O4 U B1084 36.761 99.228 114.060 1.00 41.95 O
ATOM 20 C5 U B1084 37.764 97.446 115.250 1.00 40.28 C
ATOM 21 C6 U B1084 38.324 96.242 115.133 1.00 40.35 C
ATOM 22 P C B1085 43.835 93.891 115.231 1.00 46.34 P
ATOM 23 OP1 C B1085 44.878 92.900 114.888 1.00 47.52 O
ATOM 24 OP2 C B1085 43.648 94.312 116.646 1.00 47.15 O
ATOM 25 O5' C B1085 44.087 95.189 114.342 1.00 47.76 O
TER
Atoms:
C2: (41.688,99.540,114.869)
OP1: (44.878,92.900,114.888)
OP2: (43.648,94.312,116.646)
C4: (40.938,98.695,116.908)
O5': (44.087,95.189,114.342)
C3': (45.357,97.337,112.650)
C1': (43.424,98.352,113.563)
O4': (42.985,97.233,112.816)
C5': (44.112,95.107,112.905)
P: (43.835,93.891,115.231)
O2: (41.671,100.398,113.969)
C4': (44.133,96.494,112.310)
C2': (44.900,98.113,113.881)
O2': (45.580,99.337,114.076)
N1: (42.571,98.458,114.761)
N3: (40.880,99.628,115.952)
N4: (40.114,98.817,117.952)
C6: (42.627,97.514,115.752)
C5: (41.838,97.595,116.834)
O3': (45.645,98.204,111.556)
OP1: (44.878,92.900,114.888)
OP2: (43.648,94.312,116.646)
C4: (40.938,98.695,116.908)
O5': (44.087,95.189,114.342)
C3': (45.357,97.337,112.650)
C1': (43.424,98.352,113.563)
O4': (42.985,97.233,112.816)
C5': (44.112,95.107,112.905)
P: (43.835,93.891,115.231)
O2: (41.671,100.398,113.969)
C4': (44.133,96.494,112.310)
C2': (44.900,98.113,113.881)
O2': (45.580,99.337,114.076)
N1: (42.571,98.458,114.761)
N3: (40.880,99.628,115.952)
N4: (40.114,98.817,117.952)
C6: (42.627,97.514,115.752)
C5: (41.838,97.595,116.834)
O3': (45.645,98.204,111.556)
C4: (37.364,98.159,114.077)
N3: (37.627,97.511,112.888)
OP1: (40.623,94.291,119.928)
OP2: (39.206,96.302,119.177)
C2: (38.202,96.278,112.735)
C1': (39.106,94.283,113.834)
C3': (41.243,94.012,114.819)
O5': (39.986,94.585,117.517)
O4': (38.943,93.647,115.092)
C5': (40.264,93.239,117.073)
P: (39.581,94.870,119.034)
C4': (40.225,93.162,115.562)
C2': (40.586,94.191,113.454)
O2': (40.758,93.049,112.638)
N1: (38.538,95.637,113.918)
O4: (36.761,99.228,114.060)
O2: (38.400,95.795,111.638)
C6: (38.324,96.242,115.133)
C5: (37.764,97.446,115.250)
O3': (42.456,93.278,114.684)
N3: (37.627,97.511,112.888)
OP1: (40.623,94.291,119.928)
OP2: (39.206,96.302,119.177)
C2: (38.202,96.278,112.735)
C1': (39.106,94.283,113.834)
C3': (41.243,94.012,114.819)
O5': (39.986,94.585,117.517)
O4': (38.943,93.647,115.092)
C5': (40.264,93.239,117.073)
P: (39.581,94.870,119.034)
C4': (40.225,93.162,115.562)
C2': (40.586,94.191,113.454)
O2': (40.758,93.049,112.638)
N1: (38.538,95.637,113.918)
O4: (36.761,99.228,114.060)
O2: (38.400,95.795,111.638)
C6: (38.324,96.242,115.133)
C5: (37.764,97.446,115.250)
O3': (42.456,93.278,114.684)
Image (generated by PyMOL):