Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01003:0613
Extra
PDB:
ATOM 1 O3' C A1002 53.941 93.694 84.578 1.00 36.32 O
ATOM 2 P C A1003 55.055 94.857 84.617 1.00 36.01 P
ATOM 3 OP1 C A1003 55.523 95.174 83.230 1.00 36.38 O
ATOM 4 OP2 C A1003 56.038 94.408 85.646 1.00 36.90 O
ATOM 5 O5' C A1003 54.302 96.160 85.148 1.00 34.29 O
ATOM 6 C5' C A1003 53.495 96.126 86.314 1.00 33.20 C
ATOM 7 C4' C A1003 54.244 96.710 87.480 1.00 34.72 C
ATOM 8 O4' C A1003 54.538 98.120 87.227 1.00 35.41 O
ATOM 9 C3' C A1003 53.457 96.678 88.796 1.00 35.58 C
ATOM 10 O3' C A1003 54.345 96.332 89.860 1.00 36.26 O
ATOM 11 C2' C A1003 53.010 98.133 88.942 1.00 34.99 C
ATOM 12 O2' C A1003 52.782 98.525 90.273 1.00 35.86 O
ATOM 13 C1' C A1003 54.239 98.846 88.400 1.00 35.70 C
ATOM 14 N1 C A1003 54.087 100.290 88.111 1.00 37.14 N
ATOM 15 C2 C A1003 54.780 101.214 88.936 1.00 38.73 C
ATOM 16 O2 C A1003 55.521 100.785 89.841 1.00 42.35 O
ATOM 17 N3 C A1003 54.631 102.543 88.720 1.00 37.17 N
ATOM 18 C4 C A1003 53.859 102.971 87.724 1.00 36.02 C
ATOM 19 N4 C A1003 53.763 104.286 87.548 1.00 35.35 N
ATOM 20 C5 C A1003 53.155 102.064 86.862 1.00 36.02 C
ATOM 21 C6 C A1003 53.296 100.744 87.091 1.00 35.98 C
ATOM 22 P G A1004 54.739 94.786 90.104 1.00 40.31 P
ATOM 23 OP1 G A1004 56.046 94.691 90.807 1.00 41.68 O
ATOM 24 OP2 G A1004 54.549 94.061 88.821 1.00 41.64 O
ATOM 25 O5' G A1004 53.652 94.243 91.139 1.00 40.48 O
TER
ATOM 1 O3' U B 612 50.586 107.263 85.356 1.00 30.35 O
ATOM 2 P U B 613 50.268 105.696 85.391 1.00 34.07 P
ATOM 3 OP1 U B 613 51.534 105.022 84.983 1.00 35.51 O
ATOM 4 OP2 U B 613 49.018 105.451 84.625 1.00 32.29 O
ATOM 5 O5' U B 613 49.986 105.365 86.928 1.00 34.01 O
ATOM 6 C5' U B 613 51.029 105.487 87.903 1.00 32.92 C
ATOM 7 C4' U B 613 50.480 105.403 89.314 1.00 32.15 C
ATOM 8 O4' U B 613 49.467 106.413 89.517 1.00 33.52 O
ATOM 9 C3' U B 613 49.743 104.156 89.780 1.00 30.79 C
ATOM 10 O3' U B 613 50.646 103.102 90.091 1.00 29.62 O
ATOM 11 C2' U B 613 49.155 104.673 91.082 1.00 30.88 C
ATOM 12 O2' U B 613 50.167 104.825 92.054 1.00 33.74 O
ATOM 13 C1' U B 613 48.731 106.083 90.683 1.00 31.41 C
ATOM 14 N1 U B 613 47.296 106.156 90.388 1.00 32.21 N
ATOM 15 C2 U B 613 46.438 106.387 91.456 1.00 32.94 C
ATOM 16 O2 U B 613 46.831 106.540 92.605 1.00 32.98 O
ATOM 17 N3 U B 613 45.106 106.427 91.131 1.00 33.38 N
ATOM 18 C4 U B 613 44.557 106.242 89.881 1.00 33.94 C
ATOM 19 O4 U B 613 43.337 106.269 89.749 1.00 36.21 O
ATOM 20 C5 U B 613 45.510 106.024 88.831 1.00 33.38 C
ATOM 21 C6 U B 613 46.815 105.992 89.115 1.00 30.51 C
ATOM 22 P U B 614 50.231 101.579 89.804 1.00 29.57 P
ATOM 23 OP1 U B 614 51.435 100.729 90.005 1.00 29.38 O
ATOM 24 OP2 U B 614 49.505 101.512 88.508 1.00 30.21 O
ATOM 25 O5' U B 614 49.187 101.259 90.956 1.00 28.80 O
TER
ATOM 2 P C A1003 55.055 94.857 84.617 1.00 36.01 P
ATOM 3 OP1 C A1003 55.523 95.174 83.230 1.00 36.38 O
ATOM 4 OP2 C A1003 56.038 94.408 85.646 1.00 36.90 O
ATOM 5 O5' C A1003 54.302 96.160 85.148 1.00 34.29 O
ATOM 6 C5' C A1003 53.495 96.126 86.314 1.00 33.20 C
ATOM 7 C4' C A1003 54.244 96.710 87.480 1.00 34.72 C
ATOM 8 O4' C A1003 54.538 98.120 87.227 1.00 35.41 O
ATOM 9 C3' C A1003 53.457 96.678 88.796 1.00 35.58 C
ATOM 10 O3' C A1003 54.345 96.332 89.860 1.00 36.26 O
ATOM 11 C2' C A1003 53.010 98.133 88.942 1.00 34.99 C
ATOM 12 O2' C A1003 52.782 98.525 90.273 1.00 35.86 O
ATOM 13 C1' C A1003 54.239 98.846 88.400 1.00 35.70 C
ATOM 14 N1 C A1003 54.087 100.290 88.111 1.00 37.14 N
ATOM 15 C2 C A1003 54.780 101.214 88.936 1.00 38.73 C
ATOM 16 O2 C A1003 55.521 100.785 89.841 1.00 42.35 O
ATOM 17 N3 C A1003 54.631 102.543 88.720 1.00 37.17 N
ATOM 18 C4 C A1003 53.859 102.971 87.724 1.00 36.02 C
ATOM 19 N4 C A1003 53.763 104.286 87.548 1.00 35.35 N
ATOM 20 C5 C A1003 53.155 102.064 86.862 1.00 36.02 C
ATOM 21 C6 C A1003 53.296 100.744 87.091 1.00 35.98 C
ATOM 22 P G A1004 54.739 94.786 90.104 1.00 40.31 P
ATOM 23 OP1 G A1004 56.046 94.691 90.807 1.00 41.68 O
ATOM 24 OP2 G A1004 54.549 94.061 88.821 1.00 41.64 O
ATOM 25 O5' G A1004 53.652 94.243 91.139 1.00 40.48 O
TER
ATOM 1 O3' U B 612 50.586 107.263 85.356 1.00 30.35 O
ATOM 2 P U B 613 50.268 105.696 85.391 1.00 34.07 P
ATOM 3 OP1 U B 613 51.534 105.022 84.983 1.00 35.51 O
ATOM 4 OP2 U B 613 49.018 105.451 84.625 1.00 32.29 O
ATOM 5 O5' U B 613 49.986 105.365 86.928 1.00 34.01 O
ATOM 6 C5' U B 613 51.029 105.487 87.903 1.00 32.92 C
ATOM 7 C4' U B 613 50.480 105.403 89.314 1.00 32.15 C
ATOM 8 O4' U B 613 49.467 106.413 89.517 1.00 33.52 O
ATOM 9 C3' U B 613 49.743 104.156 89.780 1.00 30.79 C
ATOM 10 O3' U B 613 50.646 103.102 90.091 1.00 29.62 O
ATOM 11 C2' U B 613 49.155 104.673 91.082 1.00 30.88 C
ATOM 12 O2' U B 613 50.167 104.825 92.054 1.00 33.74 O
ATOM 13 C1' U B 613 48.731 106.083 90.683 1.00 31.41 C
ATOM 14 N1 U B 613 47.296 106.156 90.388 1.00 32.21 N
ATOM 15 C2 U B 613 46.438 106.387 91.456 1.00 32.94 C
ATOM 16 O2 U B 613 46.831 106.540 92.605 1.00 32.98 O
ATOM 17 N3 U B 613 45.106 106.427 91.131 1.00 33.38 N
ATOM 18 C4 U B 613 44.557 106.242 89.881 1.00 33.94 C
ATOM 19 O4 U B 613 43.337 106.269 89.749 1.00 36.21 O
ATOM 20 C5 U B 613 45.510 106.024 88.831 1.00 33.38 C
ATOM 21 C6 U B 613 46.815 105.992 89.115 1.00 30.51 C
ATOM 22 P U B 614 50.231 101.579 89.804 1.00 29.57 P
ATOM 23 OP1 U B 614 51.435 100.729 90.005 1.00 29.38 O
ATOM 24 OP2 U B 614 49.505 101.512 88.508 1.00 30.21 O
ATOM 25 O5' U B 614 49.187 101.259 90.956 1.00 28.80 O
TER
Atoms:
C2: (54.780,101.214,88.936)
OP1: (55.523,95.174,83.230)
OP2: (56.038,94.408,85.646)
C4: (53.859,102.971,87.724)
O5': (54.302,96.160,85.148)
C3': (53.457,96.678,88.796)
C1': (54.239,98.846,88.400)
O4': (54.538,98.120,87.227)
C5': (53.495,96.126,86.314)
P: (55.055,94.857,84.617)
O2: (55.521,100.785,89.841)
C4': (54.244,96.710,87.480)
C2': (53.010,98.133,88.942)
O2': (52.782,98.525,90.273)
N1: (54.087,100.290,88.111)
N3: (54.631,102.543,88.720)
N4: (53.763,104.286,87.548)
C6: (53.296,100.744,87.091)
C5: (53.155,102.064,86.862)
O3': (54.345,96.332,89.860)
OP1: (55.523,95.174,83.230)
OP2: (56.038,94.408,85.646)
C4: (53.859,102.971,87.724)
O5': (54.302,96.160,85.148)
C3': (53.457,96.678,88.796)
C1': (54.239,98.846,88.400)
O4': (54.538,98.120,87.227)
C5': (53.495,96.126,86.314)
P: (55.055,94.857,84.617)
O2: (55.521,100.785,89.841)
C4': (54.244,96.710,87.480)
C2': (53.010,98.133,88.942)
O2': (52.782,98.525,90.273)
N1: (54.087,100.290,88.111)
N3: (54.631,102.543,88.720)
N4: (53.763,104.286,87.548)
C6: (53.296,100.744,87.091)
C5: (53.155,102.064,86.862)
O3': (54.345,96.332,89.860)
C4: (44.557,106.242,89.881)
N3: (45.106,106.427,91.131)
OP1: (51.534,105.022,84.983)
OP2: (49.018,105.451,84.625)
C2: (46.438,106.387,91.456)
C1': (48.731,106.083,90.683)
C3': (49.743,104.156,89.780)
O5': (49.986,105.365,86.928)
O4': (49.467,106.413,89.517)
C5': (51.029,105.487,87.903)
P: (50.268,105.696,85.391)
C4': (50.480,105.403,89.314)
C2': (49.155,104.673,91.082)
O2': (50.167,104.825,92.054)
N1: (47.296,106.156,90.388)
O4: (43.337,106.269,89.749)
O2: (46.831,106.540,92.605)
C6: (46.815,105.992,89.115)
C5: (45.510,106.024,88.831)
O3': (50.646,103.102,90.091)
N3: (45.106,106.427,91.131)
OP1: (51.534,105.022,84.983)
OP2: (49.018,105.451,84.625)
C2: (46.438,106.387,91.456)
C1': (48.731,106.083,90.683)
C3': (49.743,104.156,89.780)
O5': (49.986,105.365,86.928)
O4': (49.467,106.413,89.517)
C5': (51.029,105.487,87.903)
P: (50.268,105.696,85.391)
C4': (50.480,105.403,89.314)
C2': (49.155,104.673,91.082)
O2': (50.167,104.825,92.054)
N1: (47.296,106.156,90.388)
O4: (43.337,106.269,89.749)
O2: (46.831,106.540,92.605)
C6: (46.815,105.992,89.115)
C5: (45.510,106.024,88.831)
O3': (50.646,103.102,90.091)
Image (generated by PyMOL):