Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.511 93.380 114.621 1.00 44.93 O
ATOM 2 P C A1085 43.873 94.028 115.152 1.00 44.92 P
ATOM 3 OP1 C A1085 44.930 93.058 114.778 1.00 44.08 O
ATOM 4 OP2 C A1085 43.690 94.421 116.574 1.00 44.80 O
ATOM 5 O5' C A1085 44.058 95.344 114.272 1.00 46.22 O
ATOM 6 C5' C A1085 44.065 95.271 112.834 1.00 46.28 C
ATOM 7 C4' C A1085 44.107 96.658 112.242 1.00 46.64 C
ATOM 8 O4' C A1085 42.983 97.423 112.761 1.00 46.13 O
ATOM 9 C3' C A1085 45.353 97.472 112.563 1.00 46.38 C
ATOM 10 O3' C A1085 45.625 98.347 111.473 1.00 45.39 O
ATOM 11 C2' C A1085 44.936 98.240 113.814 1.00 46.48 C
ATOM 12 O2' C A1085 45.644 99.451 113.990 1.00 46.45 O
ATOM 13 C1' C A1085 43.458 98.509 113.532 1.00 46.01 C
ATOM 14 N1 C A1085 42.630 98.584 114.745 1.00 45.18 N
ATOM 15 C2 C A1085 41.775 99.676 114.909 1.00 45.87 C
ATOM 16 O2 C A1085 41.774 100.580 114.052 1.00 47.12 O
ATOM 17 N3 C A1085 40.974 99.726 115.999 1.00 46.26 N
ATOM 18 C4 C A1085 41.018 98.747 116.906 1.00 43.95 C
ATOM 19 N4 C A1085 40.198 98.828 117.949 1.00 43.61 N
ATOM 20 C5 C A1085 41.898 97.640 116.776 1.00 44.25 C
ATOM 21 C6 C A1085 42.679 97.597 115.691 1.00 44.89 C
ATOM 22 P C A1086 47.099 98.380 110.831 1.00 47.85 P
ATOM 23 OP1 C A1086 47.023 99.191 109.585 1.00 50.12 O
ATOM 24 OP2 C A1086 47.633 96.988 110.772 1.00 46.57 O
ATOM 25 O5' C A1086 47.949 99.203 111.900 1.00 46.79 O
TER
ATOM 1 O3' A B1083 38.204 94.137 119.044 1.00 39.99 O
ATOM 2 P U B1084 39.568 94.943 118.867 1.00 38.29 P
ATOM 3 OP1 U B1084 40.579 94.305 119.763 1.00 37.42 O
ATOM 4 OP2 U B1084 39.246 96.382 119.023 1.00 35.29 O
ATOM 5 O5' U B1084 39.956 94.658 117.346 1.00 38.45 O
ATOM 6 C5' U B1084 40.252 93.314 116.901 1.00 39.41 C
ATOM 7 C4' U B1084 40.263 93.250 115.390 1.00 42.39 C
ATOM 8 O4' U B1084 38.999 93.736 114.871 1.00 43.66 O
ATOM 9 C3' U B1084 41.303 94.112 114.697 1.00 42.93 C
ATOM 10 O3' U B1084 42.511 93.380 114.621 1.00 44.93 O
ATOM 11 C2' U B1084 40.704 94.302 113.306 1.00 43.28 C
ATOM 12 O2' U B1084 40.907 93.172 112.473 1.00 43.59 O
ATOM 13 C1' U B1084 39.211 94.393 113.630 1.00 41.55 C
ATOM 14 N1 U B1084 38.658 95.750 113.731 1.00 38.71 N
ATOM 15 C2 U B1084 38.257 96.376 112.564 1.00 38.38 C
ATOM 16 O2 U B1084 38.401 95.877 111.469 1.00 40.01 O
ATOM 17 N3 U B1084 37.680 97.609 112.733 1.00 37.22 N
ATOM 18 C4 U B1084 37.476 98.264 113.931 1.00 38.80 C
ATOM 19 O4 U B1084 36.920 99.362 113.937 1.00 41.95 O
ATOM 20 C5 U B1084 37.950 97.566 115.084 1.00 38.69 C
ATOM 21 C6 U B1084 38.515 96.366 114.946 1.00 38.25 C
ATOM 22 P C B1085 43.873 94.028 115.152 1.00 44.92 P
ATOM 23 OP1 C B1085 44.930 93.058 114.778 1.00 44.08 O
ATOM 24 OP2 C B1085 43.690 94.421 116.574 1.00 44.80 O
ATOM 25 O5' C B1085 44.058 95.344 114.272 1.00 46.22 O
TER
ATOM 2 P C A1085 43.873 94.028 115.152 1.00 44.92 P
ATOM 3 OP1 C A1085 44.930 93.058 114.778 1.00 44.08 O
ATOM 4 OP2 C A1085 43.690 94.421 116.574 1.00 44.80 O
ATOM 5 O5' C A1085 44.058 95.344 114.272 1.00 46.22 O
ATOM 6 C5' C A1085 44.065 95.271 112.834 1.00 46.28 C
ATOM 7 C4' C A1085 44.107 96.658 112.242 1.00 46.64 C
ATOM 8 O4' C A1085 42.983 97.423 112.761 1.00 46.13 O
ATOM 9 C3' C A1085 45.353 97.472 112.563 1.00 46.38 C
ATOM 10 O3' C A1085 45.625 98.347 111.473 1.00 45.39 O
ATOM 11 C2' C A1085 44.936 98.240 113.814 1.00 46.48 C
ATOM 12 O2' C A1085 45.644 99.451 113.990 1.00 46.45 O
ATOM 13 C1' C A1085 43.458 98.509 113.532 1.00 46.01 C
ATOM 14 N1 C A1085 42.630 98.584 114.745 1.00 45.18 N
ATOM 15 C2 C A1085 41.775 99.676 114.909 1.00 45.87 C
ATOM 16 O2 C A1085 41.774 100.580 114.052 1.00 47.12 O
ATOM 17 N3 C A1085 40.974 99.726 115.999 1.00 46.26 N
ATOM 18 C4 C A1085 41.018 98.747 116.906 1.00 43.95 C
ATOM 19 N4 C A1085 40.198 98.828 117.949 1.00 43.61 N
ATOM 20 C5 C A1085 41.898 97.640 116.776 1.00 44.25 C
ATOM 21 C6 C A1085 42.679 97.597 115.691 1.00 44.89 C
ATOM 22 P C A1086 47.099 98.380 110.831 1.00 47.85 P
ATOM 23 OP1 C A1086 47.023 99.191 109.585 1.00 50.12 O
ATOM 24 OP2 C A1086 47.633 96.988 110.772 1.00 46.57 O
ATOM 25 O5' C A1086 47.949 99.203 111.900 1.00 46.79 O
TER
ATOM 1 O3' A B1083 38.204 94.137 119.044 1.00 39.99 O
ATOM 2 P U B1084 39.568 94.943 118.867 1.00 38.29 P
ATOM 3 OP1 U B1084 40.579 94.305 119.763 1.00 37.42 O
ATOM 4 OP2 U B1084 39.246 96.382 119.023 1.00 35.29 O
ATOM 5 O5' U B1084 39.956 94.658 117.346 1.00 38.45 O
ATOM 6 C5' U B1084 40.252 93.314 116.901 1.00 39.41 C
ATOM 7 C4' U B1084 40.263 93.250 115.390 1.00 42.39 C
ATOM 8 O4' U B1084 38.999 93.736 114.871 1.00 43.66 O
ATOM 9 C3' U B1084 41.303 94.112 114.697 1.00 42.93 C
ATOM 10 O3' U B1084 42.511 93.380 114.621 1.00 44.93 O
ATOM 11 C2' U B1084 40.704 94.302 113.306 1.00 43.28 C
ATOM 12 O2' U B1084 40.907 93.172 112.473 1.00 43.59 O
ATOM 13 C1' U B1084 39.211 94.393 113.630 1.00 41.55 C
ATOM 14 N1 U B1084 38.658 95.750 113.731 1.00 38.71 N
ATOM 15 C2 U B1084 38.257 96.376 112.564 1.00 38.38 C
ATOM 16 O2 U B1084 38.401 95.877 111.469 1.00 40.01 O
ATOM 17 N3 U B1084 37.680 97.609 112.733 1.00 37.22 N
ATOM 18 C4 U B1084 37.476 98.264 113.931 1.00 38.80 C
ATOM 19 O4 U B1084 36.920 99.362 113.937 1.00 41.95 O
ATOM 20 C5 U B1084 37.950 97.566 115.084 1.00 38.69 C
ATOM 21 C6 U B1084 38.515 96.366 114.946 1.00 38.25 C
ATOM 22 P C B1085 43.873 94.028 115.152 1.00 44.92 P
ATOM 23 OP1 C B1085 44.930 93.058 114.778 1.00 44.08 O
ATOM 24 OP2 C B1085 43.690 94.421 116.574 1.00 44.80 O
ATOM 25 O5' C B1085 44.058 95.344 114.272 1.00 46.22 O
TER
Atoms:
C2: (41.775,99.676,114.909)
OP1: (44.930,93.058,114.778)
OP2: (43.690,94.421,116.574)
C4: (41.018,98.747,116.906)
O5': (44.058,95.344,114.272)
C3': (45.353,97.472,112.563)
C1': (43.458,98.509,113.532)
O4': (42.983,97.423,112.761)
C5': (44.065,95.271,112.834)
P: (43.873,94.028,115.152)
O2: (41.774,100.580,114.052)
C4': (44.107,96.658,112.242)
C2': (44.936,98.240,113.814)
O2': (45.644,99.451,113.990)
N1: (42.630,98.584,114.745)
N3: (40.974,99.726,115.999)
N4: (40.198,98.828,117.949)
C6: (42.679,97.597,115.691)
C5: (41.898,97.640,116.776)
O3': (45.625,98.347,111.473)
OP1: (44.930,93.058,114.778)
OP2: (43.690,94.421,116.574)
C4: (41.018,98.747,116.906)
O5': (44.058,95.344,114.272)
C3': (45.353,97.472,112.563)
C1': (43.458,98.509,113.532)
O4': (42.983,97.423,112.761)
C5': (44.065,95.271,112.834)
P: (43.873,94.028,115.152)
O2: (41.774,100.580,114.052)
C4': (44.107,96.658,112.242)
C2': (44.936,98.240,113.814)
O2': (45.644,99.451,113.990)
N1: (42.630,98.584,114.745)
N3: (40.974,99.726,115.999)
N4: (40.198,98.828,117.949)
C6: (42.679,97.597,115.691)
C5: (41.898,97.640,116.776)
O3': (45.625,98.347,111.473)
C4: (37.476,98.264,113.931)
N3: (37.680,97.609,112.733)
OP1: (40.579,94.305,119.763)
OP2: (39.246,96.382,119.023)
C2: (38.257,96.376,112.564)
C1': (39.211,94.393,113.630)
C3': (41.303,94.112,114.697)
O5': (39.956,94.658,117.346)
O4': (38.999,93.736,114.871)
C5': (40.252,93.314,116.901)
P: (39.568,94.943,118.867)
C4': (40.263,93.250,115.390)
C2': (40.704,94.302,113.306)
O2': (40.907,93.172,112.473)
N1: (38.658,95.750,113.731)
O4: (36.920,99.362,113.937)
O2: (38.401,95.877,111.469)
C6: (38.515,96.366,114.946)
C5: (37.950,97.566,115.084)
O3': (42.511,93.380,114.621)
N3: (37.680,97.609,112.733)
OP1: (40.579,94.305,119.763)
OP2: (39.246,96.382,119.023)
C2: (38.257,96.376,112.564)
C1': (39.211,94.393,113.630)
C3': (41.303,94.112,114.697)
O5': (39.956,94.658,117.346)
O4': (38.999,93.736,114.871)
C5': (40.252,93.314,116.901)
P: (39.568,94.943,118.867)
C4': (40.263,93.250,115.390)
C2': (40.704,94.302,113.306)
O2': (40.907,93.172,112.473)
N1: (38.658,95.750,113.731)
O4: (36.920,99.362,113.937)
O2: (38.401,95.877,111.469)
C6: (38.515,96.366,114.946)
C5: (37.950,97.566,115.084)
O3': (42.511,93.380,114.621)
Image (generated by PyMOL):