Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01949:01948
Extra
PDB:
ATOM 1 O3' C A1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 2 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 3 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 4 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 5 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
ATOM 6 C5' U A1949 111.237 115.461 117.802 1.00 73.61 C
ATOM 7 C4' U A1949 109.927 115.185 117.091 1.00 74.92 C
ATOM 8 O4' U A1949 109.120 116.394 117.051 1.00 76.26 O
ATOM 9 C3' U A1949 110.043 114.792 115.630 1.00 75.71 C
ATOM 10 O3' U A1949 110.341 113.426 115.471 1.00 79.24 O
ATOM 11 C2' U A1949 108.668 115.137 115.090 1.00 75.53 C
ATOM 12 O2' U A1949 107.708 114.165 115.441 1.00 74.09 O
ATOM 13 C1' U A1949 108.387 116.444 115.833 1.00 75.52 C
ATOM 14 N1 U A1949 108.808 117.642 115.082 1.00 75.86 N
ATOM 15 C2 U A1949 107.821 118.471 114.573 1.00 75.84 C
ATOM 16 O2 U A1949 106.633 118.260 114.724 1.00 77.60 O
ATOM 17 N3 U A1949 108.279 119.559 113.874 1.00 75.70 N
ATOM 18 C4 U A1949 109.594 119.899 113.629 1.00 76.51 C
ATOM 19 O4 U A1949 109.848 120.888 112.934 1.00 76.53 O
ATOM 20 C5 U A1949 110.555 119.002 114.194 1.00 76.13 C
ATOM 21 C6 U A1949 110.142 117.934 114.882 1.00 75.53 C
ATOM 22 P U A1950 110.846 112.887 114.050 1.00 82.67 P
ATOM 23 OP1 U A1950 111.688 111.691 114.306 1.00 82.37 O
ATOM 24 OP2 U A1950 111.405 114.018 113.273 1.00 81.95 O
ATOM 25 O5' U A1950 109.509 112.416 113.326 1.00 85.27 O
TER
ATOM 1 O3' G B1947 113.489 123.813 118.322 1.00 63.91 O
ATOM 2 P C B1948 113.550 122.591 117.278 1.00 65.99 P
ATOM 3 OP1 C B1948 114.962 122.183 117.184 1.00 66.17 O
ATOM 4 OP2 C B1948 112.821 122.963 116.041 1.00 66.49 O
ATOM 5 O5' C B1948 112.755 121.424 118.020 1.00 66.18 O
ATOM 6 C5' C B1948 113.194 120.955 119.304 1.00 66.42 C
ATOM 7 C4' C B1948 112.278 119.877 119.829 1.00 67.09 C
ATOM 8 O4' C B1948 110.969 120.424 120.131 1.00 67.28 O
ATOM 9 C3' C B1948 111.990 118.705 118.909 1.00 66.90 C
ATOM 10 O3' C B1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 11 C2' C B1948 110.718 118.137 119.524 1.00 66.91 C
ATOM 12 O2' C B1948 110.983 117.349 120.663 1.00 67.04 O
ATOM 13 C1' C B1948 109.987 119.414 119.953 1.00 67.23 C
ATOM 14 N1 C B1948 108.999 119.877 118.955 1.00 68.04 N
ATOM 15 C2 C B1948 107.645 119.527 119.122 1.00 67.43 C
ATOM 16 O2 C B1948 107.308 118.861 120.114 1.00 66.77 O
ATOM 17 N3 C B1948 106.742 119.926 118.195 1.00 67.12 N
ATOM 18 C4 C B1948 107.140 120.643 117.141 1.00 66.74 C
ATOM 19 N4 C B1948 106.221 121.000 116.245 1.00 65.73 N
ATOM 20 C5 C B1948 108.500 121.021 116.956 1.00 67.39 C
ATOM 21 C6 C B1948 109.387 120.623 117.876 1.00 67.46 C
ATOM 22 P U B1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 23 OP1 U B1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 24 OP2 U B1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 25 O5' U B1949 112.029 116.406 117.045 1.00 72.80 O
TER
ATOM 2 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 3 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 4 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 5 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
ATOM 6 C5' U A1949 111.237 115.461 117.802 1.00 73.61 C
ATOM 7 C4' U A1949 109.927 115.185 117.091 1.00 74.92 C
ATOM 8 O4' U A1949 109.120 116.394 117.051 1.00 76.26 O
ATOM 9 C3' U A1949 110.043 114.792 115.630 1.00 75.71 C
ATOM 10 O3' U A1949 110.341 113.426 115.471 1.00 79.24 O
ATOM 11 C2' U A1949 108.668 115.137 115.090 1.00 75.53 C
ATOM 12 O2' U A1949 107.708 114.165 115.441 1.00 74.09 O
ATOM 13 C1' U A1949 108.387 116.444 115.833 1.00 75.52 C
ATOM 14 N1 U A1949 108.808 117.642 115.082 1.00 75.86 N
ATOM 15 C2 U A1949 107.821 118.471 114.573 1.00 75.84 C
ATOM 16 O2 U A1949 106.633 118.260 114.724 1.00 77.60 O
ATOM 17 N3 U A1949 108.279 119.559 113.874 1.00 75.70 N
ATOM 18 C4 U A1949 109.594 119.899 113.629 1.00 76.51 C
ATOM 19 O4 U A1949 109.848 120.888 112.934 1.00 76.53 O
ATOM 20 C5 U A1949 110.555 119.002 114.194 1.00 76.13 C
ATOM 21 C6 U A1949 110.142 117.934 114.882 1.00 75.53 C
ATOM 22 P U A1950 110.846 112.887 114.050 1.00 82.67 P
ATOM 23 OP1 U A1950 111.688 111.691 114.306 1.00 82.37 O
ATOM 24 OP2 U A1950 111.405 114.018 113.273 1.00 81.95 O
ATOM 25 O5' U A1950 109.509 112.416 113.326 1.00 85.27 O
TER
ATOM 1 O3' G B1947 113.489 123.813 118.322 1.00 63.91 O
ATOM 2 P C B1948 113.550 122.591 117.278 1.00 65.99 P
ATOM 3 OP1 C B1948 114.962 122.183 117.184 1.00 66.17 O
ATOM 4 OP2 C B1948 112.821 122.963 116.041 1.00 66.49 O
ATOM 5 O5' C B1948 112.755 121.424 118.020 1.00 66.18 O
ATOM 6 C5' C B1948 113.194 120.955 119.304 1.00 66.42 C
ATOM 7 C4' C B1948 112.278 119.877 119.829 1.00 67.09 C
ATOM 8 O4' C B1948 110.969 120.424 120.131 1.00 67.28 O
ATOM 9 C3' C B1948 111.990 118.705 118.909 1.00 66.90 C
ATOM 10 O3' C B1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 11 C2' C B1948 110.718 118.137 119.524 1.00 66.91 C
ATOM 12 O2' C B1948 110.983 117.349 120.663 1.00 67.04 O
ATOM 13 C1' C B1948 109.987 119.414 119.953 1.00 67.23 C
ATOM 14 N1 C B1948 108.999 119.877 118.955 1.00 68.04 N
ATOM 15 C2 C B1948 107.645 119.527 119.122 1.00 67.43 C
ATOM 16 O2 C B1948 107.308 118.861 120.114 1.00 66.77 O
ATOM 17 N3 C B1948 106.742 119.926 118.195 1.00 67.12 N
ATOM 18 C4 C B1948 107.140 120.643 117.141 1.00 66.74 C
ATOM 19 N4 C B1948 106.221 121.000 116.245 1.00 65.73 N
ATOM 20 C5 C B1948 108.500 121.021 116.956 1.00 67.39 C
ATOM 21 C6 C B1948 109.387 120.623 117.876 1.00 67.46 C
ATOM 22 P U B1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 23 OP1 U B1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 24 OP2 U B1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 25 O5' U B1949 112.029 116.406 117.045 1.00 72.80 O
TER
Atoms:
C4: (109.594,119.899,113.629)
N3: (108.279,119.559,113.874)
OP1: (114.235,115.767,117.965)
OP2: (113.970,117.925,116.607)
C2: (107.821,118.471,114.573)
C1': (108.387,116.444,115.833)
C3': (110.043,114.792,115.630)
O5': (112.029,116.406,117.045)
O4': (109.120,116.394,117.051)
C5': (111.237,115.461,117.802)
P: (113.428,116.947,117.589)
C4': (109.927,115.185,117.091)
C2': (108.668,115.137,115.090)
O2': (107.708,114.165,115.441)
N1: (108.808,117.642,115.082)
O4: (109.848,120.888,112.934)
O2: (106.633,118.260,114.724)
C6: (110.142,117.934,114.882)
C5: (110.555,119.002,114.194)
O3': (110.341,113.426,115.471)
N3: (108.279,119.559,113.874)
OP1: (114.235,115.767,117.965)
OP2: (113.970,117.925,116.607)
C2: (107.821,118.471,114.573)
C1': (108.387,116.444,115.833)
C3': (110.043,114.792,115.630)
O5': (112.029,116.406,117.045)
O4': (109.120,116.394,117.051)
C5': (111.237,115.461,117.802)
P: (113.428,116.947,117.589)
C4': (109.927,115.185,117.091)
C2': (108.668,115.137,115.090)
O2': (107.708,114.165,115.441)
N1: (108.808,117.642,115.082)
O4: (109.848,120.888,112.934)
O2: (106.633,118.260,114.724)
C6: (110.142,117.934,114.882)
C5: (110.555,119.002,114.194)
O3': (110.341,113.426,115.471)
C2: (107.645,119.527,119.122)
OP1: (114.962,122.183,117.184)
OP2: (112.821,122.963,116.041)
C4: (107.140,120.643,117.141)
O5': (112.755,121.424,118.020)
C3': (111.990,118.705,118.909)
C1': (109.987,119.414,119.953)
O4': (110.969,120.424,120.131)
C5': (113.194,120.955,119.304)
P: (113.550,122.591,117.278)
O2: (107.308,118.861,120.114)
C4': (112.278,119.877,119.829)
C2': (110.718,118.137,119.524)
O2': (110.983,117.349,120.663)
N1: (108.999,119.877,118.955)
N3: (106.742,119.926,118.195)
N4: (106.221,121.000,116.245)
C6: (109.387,120.623,117.876)
C5: (108.500,121.021,116.956)
O3': (113.048,117.749,118.929)
OP1: (114.962,122.183,117.184)
OP2: (112.821,122.963,116.041)
C4: (107.140,120.643,117.141)
O5': (112.755,121.424,118.020)
C3': (111.990,118.705,118.909)
C1': (109.987,119.414,119.953)
O4': (110.969,120.424,120.131)
C5': (113.194,120.955,119.304)
P: (113.550,122.591,117.278)
O2: (107.308,118.861,120.114)
C4': (112.278,119.877,119.829)
C2': (110.718,118.137,119.524)
O2': (110.983,117.349,120.663)
N1: (108.999,119.877,118.955)
N3: (106.742,119.926,118.195)
N4: (106.221,121.000,116.245)
C6: (109.387,120.623,117.876)
C5: (108.500,121.021,116.956)
O3': (113.048,117.749,118.929)
Image (generated by PyMOL):