Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.574 93.372 114.862 1.00 49.64 O
ATOM 2 P C A1085 43.933 94.028 115.405 1.00 50.77 P
ATOM 3 OP1 C A1085 45.015 93.056 115.124 1.00 50.93 O
ATOM 4 OP2 C A1085 43.715 94.505 116.794 1.00 52.13 O
ATOM 5 O5' C A1085 44.159 95.312 114.493 1.00 52.84 O
ATOM 6 C5' C A1085 44.151 95.217 113.058 1.00 52.05 C
ATOM 7 C4' C A1085 44.174 96.599 112.459 1.00 52.62 C
ATOM 8 O4' C A1085 43.037 97.339 112.988 1.00 52.09 O
ATOM 9 C3' C A1085 45.407 97.434 112.792 1.00 52.97 C
ATOM 10 O3' C A1085 45.666 98.327 111.712 1.00 52.68 O
ATOM 11 C2' C A1085 44.966 98.189 114.044 1.00 53.84 C
ATOM 12 O2' C A1085 45.662 99.400 114.269 1.00 53.71 O
ATOM 13 C1' C A1085 43.493 98.452 113.732 1.00 53.63 C
ATOM 14 N1 C A1085 42.637 98.577 114.923 1.00 54.29 N
ATOM 15 C2 C A1085 41.782 99.682 115.030 1.00 55.41 C
ATOM 16 O2 C A1085 41.801 100.553 114.141 1.00 57.76 O
ATOM 17 N3 C A1085 40.960 99.776 116.102 1.00 56.24 N
ATOM 18 C4 C A1085 40.985 98.831 117.048 1.00 55.93 C
ATOM 19 N4 C A1085 40.152 98.957 118.081 1.00 56.26 N
ATOM 20 C5 C A1085 41.864 97.714 116.975 1.00 55.37 C
ATOM 21 C6 C A1085 42.662 97.625 115.906 1.00 54.45 C
ATOM 22 P C A1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 23 OP1 C A1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 24 OP2 C A1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 25 O5' C A1086 47.973 99.217 112.172 1.00 52.41 O
TER
ATOM 1 O3' A B1083 38.310 94.090 119.353 1.00 44.85 O
ATOM 2 P U B1084 39.669 94.915 119.164 1.00 44.08 P
ATOM 3 OP1 U B1084 40.710 94.313 120.040 1.00 41.97 O
ATOM 4 OP2 U B1084 39.328 96.349 119.301 1.00 40.26 O
ATOM 5 O5' U B1084 40.050 94.628 117.642 1.00 44.17 O
ATOM 6 C5' U B1084 40.337 93.283 117.197 1.00 44.90 C
ATOM 7 C4' U B1084 40.322 93.214 115.687 1.00 47.18 C
ATOM 8 O4' U B1084 39.044 93.692 115.199 1.00 48.00 O
ATOM 9 C3' U B1084 41.345 94.082 114.972 1.00 48.12 C
ATOM 10 O3' U B1084 42.574 93.372 114.862 1.00 49.64 O
ATOM 11 C2' U B1084 40.713 94.277 113.596 1.00 48.23 C
ATOM 12 O2' U B1084 40.927 93.173 112.736 1.00 50.01 O
ATOM 13 C1' U B1084 39.224 94.333 113.947 1.00 46.54 C
ATOM 14 N1 U B1084 38.630 95.677 114.010 1.00 43.16 N
ATOM 15 C2 U B1084 38.265 96.274 112.816 1.00 41.96 C
ATOM 16 O2 U B1084 38.444 95.751 111.737 1.00 44.83 O
ATOM 17 N3 U B1084 37.682 97.506 112.936 1.00 39.76 N
ATOM 18 C4 U B1084 37.426 98.183 114.107 1.00 41.50 C
ATOM 19 O4 U B1084 36.875 99.276 114.063 1.00 42.87 O
ATOM 20 C5 U B1084 37.850 97.509 115.295 1.00 42.31 C
ATOM 21 C6 U B1084 38.424 96.312 115.207 1.00 42.01 C
ATOM 22 P C B1085 43.933 94.028 115.405 1.00 50.77 P
ATOM 23 OP1 C B1085 45.015 93.056 115.124 1.00 50.93 O
ATOM 24 OP2 C B1085 43.715 94.505 116.794 1.00 52.13 O
ATOM 25 O5' C B1085 44.159 95.312 114.493 1.00 52.84 O
TER
ATOM 2 P C A1085 43.933 94.028 115.405 1.00 50.77 P
ATOM 3 OP1 C A1085 45.015 93.056 115.124 1.00 50.93 O
ATOM 4 OP2 C A1085 43.715 94.505 116.794 1.00 52.13 O
ATOM 5 O5' C A1085 44.159 95.312 114.493 1.00 52.84 O
ATOM 6 C5' C A1085 44.151 95.217 113.058 1.00 52.05 C
ATOM 7 C4' C A1085 44.174 96.599 112.459 1.00 52.62 C
ATOM 8 O4' C A1085 43.037 97.339 112.988 1.00 52.09 O
ATOM 9 C3' C A1085 45.407 97.434 112.792 1.00 52.97 C
ATOM 10 O3' C A1085 45.666 98.327 111.712 1.00 52.68 O
ATOM 11 C2' C A1085 44.966 98.189 114.044 1.00 53.84 C
ATOM 12 O2' C A1085 45.662 99.400 114.269 1.00 53.71 O
ATOM 13 C1' C A1085 43.493 98.452 113.732 1.00 53.63 C
ATOM 14 N1 C A1085 42.637 98.577 114.923 1.00 54.29 N
ATOM 15 C2 C A1085 41.782 99.682 115.030 1.00 55.41 C
ATOM 16 O2 C A1085 41.801 100.553 114.141 1.00 57.76 O
ATOM 17 N3 C A1085 40.960 99.776 116.102 1.00 56.24 N
ATOM 18 C4 C A1085 40.985 98.831 117.048 1.00 55.93 C
ATOM 19 N4 C A1085 40.152 98.957 118.081 1.00 56.26 N
ATOM 20 C5 C A1085 41.864 97.714 116.975 1.00 55.37 C
ATOM 21 C6 C A1085 42.662 97.625 115.906 1.00 54.45 C
ATOM 22 P C A1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 23 OP1 C A1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 24 OP2 C A1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 25 O5' C A1086 47.973 99.217 112.172 1.00 52.41 O
TER
ATOM 1 O3' A B1083 38.310 94.090 119.353 1.00 44.85 O
ATOM 2 P U B1084 39.669 94.915 119.164 1.00 44.08 P
ATOM 3 OP1 U B1084 40.710 94.313 120.040 1.00 41.97 O
ATOM 4 OP2 U B1084 39.328 96.349 119.301 1.00 40.26 O
ATOM 5 O5' U B1084 40.050 94.628 117.642 1.00 44.17 O
ATOM 6 C5' U B1084 40.337 93.283 117.197 1.00 44.90 C
ATOM 7 C4' U B1084 40.322 93.214 115.687 1.00 47.18 C
ATOM 8 O4' U B1084 39.044 93.692 115.199 1.00 48.00 O
ATOM 9 C3' U B1084 41.345 94.082 114.972 1.00 48.12 C
ATOM 10 O3' U B1084 42.574 93.372 114.862 1.00 49.64 O
ATOM 11 C2' U B1084 40.713 94.277 113.596 1.00 48.23 C
ATOM 12 O2' U B1084 40.927 93.173 112.736 1.00 50.01 O
ATOM 13 C1' U B1084 39.224 94.333 113.947 1.00 46.54 C
ATOM 14 N1 U B1084 38.630 95.677 114.010 1.00 43.16 N
ATOM 15 C2 U B1084 38.265 96.274 112.816 1.00 41.96 C
ATOM 16 O2 U B1084 38.444 95.751 111.737 1.00 44.83 O
ATOM 17 N3 U B1084 37.682 97.506 112.936 1.00 39.76 N
ATOM 18 C4 U B1084 37.426 98.183 114.107 1.00 41.50 C
ATOM 19 O4 U B1084 36.875 99.276 114.063 1.00 42.87 O
ATOM 20 C5 U B1084 37.850 97.509 115.295 1.00 42.31 C
ATOM 21 C6 U B1084 38.424 96.312 115.207 1.00 42.01 C
ATOM 22 P C B1085 43.933 94.028 115.405 1.00 50.77 P
ATOM 23 OP1 C B1085 45.015 93.056 115.124 1.00 50.93 O
ATOM 24 OP2 C B1085 43.715 94.505 116.794 1.00 52.13 O
ATOM 25 O5' C B1085 44.159 95.312 114.493 1.00 52.84 O
TER
Atoms:
C2: (41.782,99.682,115.030)
OP1: (45.015,93.056,115.124)
OP2: (43.715,94.505,116.794)
C4: (40.985,98.831,117.048)
O5': (44.159,95.312,114.493)
C3': (45.407,97.434,112.792)
C1': (43.493,98.452,113.732)
O4': (43.037,97.339,112.988)
C5': (44.151,95.217,113.058)
P: (43.933,94.028,115.405)
O2: (41.801,100.553,114.141)
C4': (44.174,96.599,112.459)
C2': (44.966,98.189,114.044)
O2': (45.662,99.400,114.269)
N1: (42.637,98.577,114.923)
N3: (40.960,99.776,116.102)
N4: (40.152,98.957,118.081)
C6: (42.662,97.625,115.906)
C5: (41.864,97.714,116.975)
O3': (45.666,98.327,111.712)
OP1: (45.015,93.056,115.124)
OP2: (43.715,94.505,116.794)
C4: (40.985,98.831,117.048)
O5': (44.159,95.312,114.493)
C3': (45.407,97.434,112.792)
C1': (43.493,98.452,113.732)
O4': (43.037,97.339,112.988)
C5': (44.151,95.217,113.058)
P: (43.933,94.028,115.405)
O2: (41.801,100.553,114.141)
C4': (44.174,96.599,112.459)
C2': (44.966,98.189,114.044)
O2': (45.662,99.400,114.269)
N1: (42.637,98.577,114.923)
N3: (40.960,99.776,116.102)
N4: (40.152,98.957,118.081)
C6: (42.662,97.625,115.906)
C5: (41.864,97.714,116.975)
O3': (45.666,98.327,111.712)
C4: (37.426,98.183,114.107)
N3: (37.682,97.506,112.936)
OP1: (40.710,94.313,120.040)
OP2: (39.328,96.349,119.301)
C2: (38.265,96.274,112.816)
C1': (39.224,94.333,113.947)
C3': (41.345,94.082,114.972)
O5': (40.050,94.628,117.642)
O4': (39.044,93.692,115.199)
C5': (40.337,93.283,117.197)
P: (39.669,94.915,119.164)
C4': (40.322,93.214,115.687)
C2': (40.713,94.277,113.596)
O2': (40.927,93.173,112.736)
N1: (38.630,95.677,114.010)
O4: (36.875,99.276,114.063)
O2: (38.444,95.751,111.737)
C6: (38.424,96.312,115.207)
C5: (37.850,97.509,115.295)
O3': (42.574,93.372,114.862)
N3: (37.682,97.506,112.936)
OP1: (40.710,94.313,120.040)
OP2: (39.328,96.349,119.301)
C2: (38.265,96.274,112.816)
C1': (39.224,94.333,113.947)
C3': (41.345,94.082,114.972)
O5': (40.050,94.628,117.642)
O4': (39.044,93.692,115.199)
C5': (40.337,93.283,117.197)
P: (39.669,94.915,119.164)
C4': (40.322,93.214,115.687)
C2': (40.713,94.277,113.596)
O2': (40.927,93.173,112.736)
N1: (38.630,95.677,114.010)
O4: (36.875,99.276,114.063)
O2: (38.444,95.751,111.737)
C6: (38.424,96.312,115.207)
C5: (37.850,97.509,115.295)
O3': (42.574,93.372,114.862)
Image (generated by PyMOL):