Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.461 93.306 114.678 1.00 48.30 O
ATOM 2 P C A1085 43.825 93.933 115.237 1.00 48.36 P
ATOM 3 OP1 C A1085 44.886 92.939 114.962 1.00 50.38 O
ATOM 4 OP2 C A1085 43.597 94.407 116.624 1.00 51.41 O
ATOM 5 O5' C A1085 44.098 95.217 114.340 1.00 50.30 O
ATOM 6 C5' C A1085 44.070 95.145 112.906 1.00 49.03 C
ATOM 7 C4' C A1085 44.078 96.537 112.330 1.00 48.52 C
ATOM 8 O4' C A1085 42.935 97.265 112.857 1.00 48.13 O
ATOM 9 C3' C A1085 45.302 97.369 112.691 1.00 49.48 C
ATOM 10 O3' C A1085 45.587 98.261 111.621 1.00 48.94 O
ATOM 11 C2' C A1085 44.843 98.118 113.937 1.00 49.35 C
ATOM 12 O2' C A1085 45.546 99.322 114.176 1.00 49.33 O
ATOM 13 C1' C A1085 43.377 98.382 113.604 1.00 49.25 C
ATOM 14 N1 C A1085 42.511 98.507 114.790 1.00 50.58 N
ATOM 15 C2 C A1085 41.687 99.637 114.916 1.00 50.67 C
ATOM 16 O2 C A1085 41.730 100.523 114.045 1.00 53.46 O
ATOM 17 N3 C A1085 40.868 99.736 115.987 1.00 51.41 N
ATOM 18 C4 C A1085 40.854 98.770 116.910 1.00 49.66 C
ATOM 19 N4 C A1085 40.015 98.900 117.935 1.00 49.00 N
ATOM 20 C5 C A1085 41.694 97.627 116.818 1.00 50.75 C
ATOM 21 C6 C A1085 42.498 97.534 115.751 1.00 50.15 C
ATOM 22 P C A1086 47.050 98.269 110.969 1.00 47.76 P
ATOM 23 OP1 C A1086 46.952 99.016 109.690 1.00 51.40 O
ATOM 24 OP2 C A1086 47.571 96.881 110.972 1.00 49.00 O
ATOM 25 O5' C A1086 47.907 99.135 111.989 1.00 48.10 O
TER
ATOM 1 O3' A B1083 38.201 94.103 119.184 1.00 45.65 O
ATOM 2 P U B1084 39.564 94.918 118.986 1.00 46.07 P
ATOM 3 OP1 U B1084 40.589 94.318 119.882 1.00 45.78 O
ATOM 4 OP2 U B1084 39.242 96.358 119.102 1.00 43.20 O
ATOM 5 O5' U B1084 39.952 94.605 117.470 1.00 45.66 O
ATOM 6 C5' U B1084 40.223 93.251 117.040 1.00 44.73 C
ATOM 7 C4' U B1084 40.213 93.167 115.527 1.00 46.35 C
ATOM 8 O4' U B1084 38.934 93.635 115.033 1.00 46.79 O
ATOM 9 C3' U B1084 41.237 94.026 114.800 1.00 46.37 C
ATOM 10 O3' U B1084 42.461 93.306 114.678 1.00 48.30 O
ATOM 11 C2' U B1084 40.601 94.214 113.426 1.00 45.88 C
ATOM 12 O2' U B1084 40.809 93.112 112.567 1.00 45.88 O
ATOM 13 C1' U B1084 39.113 94.272 113.779 1.00 45.34 C
ATOM 14 N1 U B1084 38.526 95.618 113.843 1.00 42.20 N
ATOM 15 C2 U B1084 38.226 96.248 112.649 1.00 42.25 C
ATOM 16 O2 U B1084 38.458 95.753 111.566 1.00 44.78 O
ATOM 17 N3 U B1084 37.643 97.480 112.774 1.00 40.93 N
ATOM 18 C4 U B1084 37.340 98.129 113.948 1.00 42.22 C
ATOM 19 O4 U B1084 36.798 99.226 113.906 1.00 44.76 O
ATOM 20 C5 U B1084 37.702 97.424 115.136 1.00 42.32 C
ATOM 21 C6 U B1084 38.268 96.224 115.044 1.00 41.42 C
ATOM 22 P C B1085 43.825 93.933 115.237 1.00 48.36 P
ATOM 23 OP1 C B1085 44.886 92.939 114.962 1.00 50.38 O
ATOM 24 OP2 C B1085 43.597 94.407 116.624 1.00 51.41 O
ATOM 25 O5' C B1085 44.098 95.217 114.340 1.00 50.30 O
TER
ATOM 2 P C A1085 43.825 93.933 115.237 1.00 48.36 P
ATOM 3 OP1 C A1085 44.886 92.939 114.962 1.00 50.38 O
ATOM 4 OP2 C A1085 43.597 94.407 116.624 1.00 51.41 O
ATOM 5 O5' C A1085 44.098 95.217 114.340 1.00 50.30 O
ATOM 6 C5' C A1085 44.070 95.145 112.906 1.00 49.03 C
ATOM 7 C4' C A1085 44.078 96.537 112.330 1.00 48.52 C
ATOM 8 O4' C A1085 42.935 97.265 112.857 1.00 48.13 O
ATOM 9 C3' C A1085 45.302 97.369 112.691 1.00 49.48 C
ATOM 10 O3' C A1085 45.587 98.261 111.621 1.00 48.94 O
ATOM 11 C2' C A1085 44.843 98.118 113.937 1.00 49.35 C
ATOM 12 O2' C A1085 45.546 99.322 114.176 1.00 49.33 O
ATOM 13 C1' C A1085 43.377 98.382 113.604 1.00 49.25 C
ATOM 14 N1 C A1085 42.511 98.507 114.790 1.00 50.58 N
ATOM 15 C2 C A1085 41.687 99.637 114.916 1.00 50.67 C
ATOM 16 O2 C A1085 41.730 100.523 114.045 1.00 53.46 O
ATOM 17 N3 C A1085 40.868 99.736 115.987 1.00 51.41 N
ATOM 18 C4 C A1085 40.854 98.770 116.910 1.00 49.66 C
ATOM 19 N4 C A1085 40.015 98.900 117.935 1.00 49.00 N
ATOM 20 C5 C A1085 41.694 97.627 116.818 1.00 50.75 C
ATOM 21 C6 C A1085 42.498 97.534 115.751 1.00 50.15 C
ATOM 22 P C A1086 47.050 98.269 110.969 1.00 47.76 P
ATOM 23 OP1 C A1086 46.952 99.016 109.690 1.00 51.40 O
ATOM 24 OP2 C A1086 47.571 96.881 110.972 1.00 49.00 O
ATOM 25 O5' C A1086 47.907 99.135 111.989 1.00 48.10 O
TER
ATOM 1 O3' A B1083 38.201 94.103 119.184 1.00 45.65 O
ATOM 2 P U B1084 39.564 94.918 118.986 1.00 46.07 P
ATOM 3 OP1 U B1084 40.589 94.318 119.882 1.00 45.78 O
ATOM 4 OP2 U B1084 39.242 96.358 119.102 1.00 43.20 O
ATOM 5 O5' U B1084 39.952 94.605 117.470 1.00 45.66 O
ATOM 6 C5' U B1084 40.223 93.251 117.040 1.00 44.73 C
ATOM 7 C4' U B1084 40.213 93.167 115.527 1.00 46.35 C
ATOM 8 O4' U B1084 38.934 93.635 115.033 1.00 46.79 O
ATOM 9 C3' U B1084 41.237 94.026 114.800 1.00 46.37 C
ATOM 10 O3' U B1084 42.461 93.306 114.678 1.00 48.30 O
ATOM 11 C2' U B1084 40.601 94.214 113.426 1.00 45.88 C
ATOM 12 O2' U B1084 40.809 93.112 112.567 1.00 45.88 O
ATOM 13 C1' U B1084 39.113 94.272 113.779 1.00 45.34 C
ATOM 14 N1 U B1084 38.526 95.618 113.843 1.00 42.20 N
ATOM 15 C2 U B1084 38.226 96.248 112.649 1.00 42.25 C
ATOM 16 O2 U B1084 38.458 95.753 111.566 1.00 44.78 O
ATOM 17 N3 U B1084 37.643 97.480 112.774 1.00 40.93 N
ATOM 18 C4 U B1084 37.340 98.129 113.948 1.00 42.22 C
ATOM 19 O4 U B1084 36.798 99.226 113.906 1.00 44.76 O
ATOM 20 C5 U B1084 37.702 97.424 115.136 1.00 42.32 C
ATOM 21 C6 U B1084 38.268 96.224 115.044 1.00 41.42 C
ATOM 22 P C B1085 43.825 93.933 115.237 1.00 48.36 P
ATOM 23 OP1 C B1085 44.886 92.939 114.962 1.00 50.38 O
ATOM 24 OP2 C B1085 43.597 94.407 116.624 1.00 51.41 O
ATOM 25 O5' C B1085 44.098 95.217 114.340 1.00 50.30 O
TER
Atoms:
C2: (41.687,99.637,114.916)
OP1: (44.886,92.939,114.962)
OP2: (43.597,94.407,116.624)
C4: (40.854,98.770,116.910)
O5': (44.098,95.217,114.340)
C3': (45.302,97.369,112.691)
C1': (43.377,98.382,113.604)
O4': (42.935,97.265,112.857)
C5': (44.070,95.145,112.906)
P: (43.825,93.933,115.237)
O2: (41.730,100.523,114.045)
C4': (44.078,96.537,112.330)
C2': (44.843,98.118,113.937)
O2': (45.546,99.322,114.176)
N1: (42.511,98.507,114.790)
N3: (40.868,99.736,115.987)
N4: (40.015,98.900,117.935)
C6: (42.498,97.534,115.751)
C5: (41.694,97.627,116.818)
O3': (45.587,98.261,111.621)
OP1: (44.886,92.939,114.962)
OP2: (43.597,94.407,116.624)
C4: (40.854,98.770,116.910)
O5': (44.098,95.217,114.340)
C3': (45.302,97.369,112.691)
C1': (43.377,98.382,113.604)
O4': (42.935,97.265,112.857)
C5': (44.070,95.145,112.906)
P: (43.825,93.933,115.237)
O2: (41.730,100.523,114.045)
C4': (44.078,96.537,112.330)
C2': (44.843,98.118,113.937)
O2': (45.546,99.322,114.176)
N1: (42.511,98.507,114.790)
N3: (40.868,99.736,115.987)
N4: (40.015,98.900,117.935)
C6: (42.498,97.534,115.751)
C5: (41.694,97.627,116.818)
O3': (45.587,98.261,111.621)
C4: (37.340,98.129,113.948)
N3: (37.643,97.480,112.774)
OP1: (40.589,94.318,119.882)
OP2: (39.242,96.358,119.102)
C2: (38.226,96.248,112.649)
C1': (39.113,94.272,113.779)
C3': (41.237,94.026,114.800)
O5': (39.952,94.605,117.470)
O4': (38.934,93.635,115.033)
C5': (40.223,93.251,117.040)
P: (39.564,94.918,118.986)
C4': (40.213,93.167,115.527)
C2': (40.601,94.214,113.426)
O2': (40.809,93.112,112.567)
N1: (38.526,95.618,113.843)
O4: (36.798,99.226,113.906)
O2: (38.458,95.753,111.566)
C6: (38.268,96.224,115.044)
C5: (37.702,97.424,115.136)
O3': (42.461,93.306,114.678)
N3: (37.643,97.480,112.774)
OP1: (40.589,94.318,119.882)
OP2: (39.242,96.358,119.102)
C2: (38.226,96.248,112.649)
C1': (39.113,94.272,113.779)
C3': (41.237,94.026,114.800)
O5': (39.952,94.605,117.470)
O4': (38.934,93.635,115.033)
C5': (40.223,93.251,117.040)
P: (39.564,94.918,118.986)
C4': (40.213,93.167,115.527)
C2': (40.601,94.214,113.426)
O2': (40.809,93.112,112.567)
N1: (38.526,95.618,113.843)
O4: (36.798,99.226,113.906)
O2: (38.458,95.753,111.566)
C6: (38.268,96.224,115.044)
C5: (37.702,97.424,115.136)
O3': (42.461,93.306,114.678)
Image (generated by PyMOL):