Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.438 93.241 114.677 1.00 55.91 O
ATOM 2 P C A1085 43.806 93.877 115.222 1.00 56.97 P
ATOM 3 OP1 C A1085 44.877 92.894 114.935 1.00 57.68 O
ATOM 4 OP2 C A1085 43.588 94.344 116.614 1.00 58.93 O
ATOM 5 O5' C A1085 44.053 95.168 114.324 1.00 58.87 O
ATOM 6 C5' C A1085 44.057 95.092 112.887 1.00 57.18 C
ATOM 7 C4' C A1085 44.093 96.483 112.305 1.00 57.88 C
ATOM 8 O4' C A1085 42.941 97.220 112.798 1.00 57.78 O
ATOM 9 C3' C A1085 45.314 97.320 112.677 1.00 58.07 C
ATOM 10 O3' C A1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 11 C2' C A1085 44.834 98.084 113.908 1.00 57.98 C
ATOM 12 O2' C A1085 45.512 99.305 114.132 1.00 56.87 O
ATOM 13 C1' C A1085 43.369 98.335 113.558 1.00 57.81 C
ATOM 14 N1 C A1085 42.488 98.447 114.735 1.00 58.12 N
ATOM 15 C2 C A1085 41.673 99.583 114.872 1.00 58.76 C
ATOM 16 O2 C A1085 41.740 100.488 114.021 1.00 61.09 O
ATOM 17 N3 C A1085 40.836 99.668 115.931 1.00 59.11 N
ATOM 18 C4 C A1085 40.798 98.685 116.836 1.00 56.82 C
ATOM 19 N4 C A1085 39.944 98.805 117.853 1.00 55.40 N
ATOM 20 C5 C A1085 41.630 97.535 116.734 1.00 57.71 C
ATOM 21 C6 C A1085 42.451 97.456 115.678 1.00 57.60 C
ATOM 22 P C A1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 23 OP1 C A1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 24 OP2 C A1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 25 O5' C A1086 47.949 99.062 111.908 1.00 56.45 O
TER
ATOM 1 O3' A B1083 38.175 93.966 119.139 1.00 52.00 O
ATOM 2 P U B1084 39.523 94.816 118.960 1.00 52.19 P
ATOM 3 OP1 U B1084 40.548 94.240 119.872 1.00 51.39 O
ATOM 4 OP2 U B1084 39.163 96.249 119.078 1.00 49.68 O
ATOM 5 O5' U B1084 39.938 94.512 117.450 1.00 51.57 O
ATOM 6 C5' U B1084 40.162 93.154 117.003 1.00 51.77 C
ATOM 7 C4' U B1084 40.174 93.091 115.489 1.00 53.87 C
ATOM 8 O4' U B1084 38.902 93.562 114.980 1.00 53.77 O
ATOM 9 C3' U B1084 41.214 93.961 114.797 1.00 54.50 C
ATOM 10 O3' U B1084 42.438 93.241 114.677 1.00 55.91 O
ATOM 11 C2' U B1084 40.596 94.198 113.421 1.00 54.06 C
ATOM 12 O2' U B1084 40.820 93.131 112.523 1.00 55.82 O
ATOM 13 C1' U B1084 39.102 94.247 113.754 1.00 52.87 C
ATOM 14 N1 U B1084 38.507 95.588 113.862 1.00 49.57 N
ATOM 15 C2 U B1084 38.233 96.267 112.691 1.00 48.80 C
ATOM 16 O2 U B1084 38.504 95.824 111.596 1.00 50.92 O
ATOM 17 N3 U B1084 37.628 97.487 112.853 1.00 48.88 N
ATOM 18 C4 U B1084 37.282 98.083 114.049 1.00 49.56 C
ATOM 19 O4 U B1084 36.720 99.174 114.041 1.00 49.96 O
ATOM 20 C5 U B1084 37.628 97.331 115.214 1.00 49.53 C
ATOM 21 C6 U B1084 38.213 96.142 115.084 1.00 49.00 C
ATOM 22 P C B1085 43.806 93.877 115.222 1.00 56.97 P
ATOM 23 OP1 C B1085 44.877 92.894 114.935 1.00 57.68 O
ATOM 24 OP2 C B1085 43.588 94.344 116.614 1.00 58.93 O
ATOM 25 O5' C B1085 44.053 95.168 114.324 1.00 58.87 O
TER
ATOM 2 P C A1085 43.806 93.877 115.222 1.00 56.97 P
ATOM 3 OP1 C A1085 44.877 92.894 114.935 1.00 57.68 O
ATOM 4 OP2 C A1085 43.588 94.344 116.614 1.00 58.93 O
ATOM 5 O5' C A1085 44.053 95.168 114.324 1.00 58.87 O
ATOM 6 C5' C A1085 44.057 95.092 112.887 1.00 57.18 C
ATOM 7 C4' C A1085 44.093 96.483 112.305 1.00 57.88 C
ATOM 8 O4' C A1085 42.941 97.220 112.798 1.00 57.78 O
ATOM 9 C3' C A1085 45.314 97.320 112.677 1.00 58.07 C
ATOM 10 O3' C A1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 11 C2' C A1085 44.834 98.084 113.908 1.00 57.98 C
ATOM 12 O2' C A1085 45.512 99.305 114.132 1.00 56.87 O
ATOM 13 C1' C A1085 43.369 98.335 113.558 1.00 57.81 C
ATOM 14 N1 C A1085 42.488 98.447 114.735 1.00 58.12 N
ATOM 15 C2 C A1085 41.673 99.583 114.872 1.00 58.76 C
ATOM 16 O2 C A1085 41.740 100.488 114.021 1.00 61.09 O
ATOM 17 N3 C A1085 40.836 99.668 115.931 1.00 59.11 N
ATOM 18 C4 C A1085 40.798 98.685 116.836 1.00 56.82 C
ATOM 19 N4 C A1085 39.944 98.805 117.853 1.00 55.40 N
ATOM 20 C5 C A1085 41.630 97.535 116.734 1.00 57.71 C
ATOM 21 C6 C A1085 42.451 97.456 115.678 1.00 57.60 C
ATOM 22 P C A1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 23 OP1 C A1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 24 OP2 C A1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 25 O5' C A1086 47.949 99.062 111.908 1.00 56.45 O
TER
ATOM 1 O3' A B1083 38.175 93.966 119.139 1.00 52.00 O
ATOM 2 P U B1084 39.523 94.816 118.960 1.00 52.19 P
ATOM 3 OP1 U B1084 40.548 94.240 119.872 1.00 51.39 O
ATOM 4 OP2 U B1084 39.163 96.249 119.078 1.00 49.68 O
ATOM 5 O5' U B1084 39.938 94.512 117.450 1.00 51.57 O
ATOM 6 C5' U B1084 40.162 93.154 117.003 1.00 51.77 C
ATOM 7 C4' U B1084 40.174 93.091 115.489 1.00 53.87 C
ATOM 8 O4' U B1084 38.902 93.562 114.980 1.00 53.77 O
ATOM 9 C3' U B1084 41.214 93.961 114.797 1.00 54.50 C
ATOM 10 O3' U B1084 42.438 93.241 114.677 1.00 55.91 O
ATOM 11 C2' U B1084 40.596 94.198 113.421 1.00 54.06 C
ATOM 12 O2' U B1084 40.820 93.131 112.523 1.00 55.82 O
ATOM 13 C1' U B1084 39.102 94.247 113.754 1.00 52.87 C
ATOM 14 N1 U B1084 38.507 95.588 113.862 1.00 49.57 N
ATOM 15 C2 U B1084 38.233 96.267 112.691 1.00 48.80 C
ATOM 16 O2 U B1084 38.504 95.824 111.596 1.00 50.92 O
ATOM 17 N3 U B1084 37.628 97.487 112.853 1.00 48.88 N
ATOM 18 C4 U B1084 37.282 98.083 114.049 1.00 49.56 C
ATOM 19 O4 U B1084 36.720 99.174 114.041 1.00 49.96 O
ATOM 20 C5 U B1084 37.628 97.331 115.214 1.00 49.53 C
ATOM 21 C6 U B1084 38.213 96.142 115.084 1.00 49.00 C
ATOM 22 P C B1085 43.806 93.877 115.222 1.00 56.97 P
ATOM 23 OP1 C B1085 44.877 92.894 114.935 1.00 57.68 O
ATOM 24 OP2 C B1085 43.588 94.344 116.614 1.00 58.93 O
ATOM 25 O5' C B1085 44.053 95.168 114.324 1.00 58.87 O
TER
Atoms:
C2: (41.673,99.583,114.872)
OP1: (44.877,92.894,114.935)
OP2: (43.588,94.344,116.614)
C4: (40.798,98.685,116.836)
O5': (44.053,95.168,114.324)
C3': (45.314,97.320,112.677)
C1': (43.369,98.335,113.558)
O4': (42.941,97.220,112.798)
C5': (44.057,95.092,112.887)
P: (43.806,93.877,115.222)
O2: (41.740,100.488,114.021)
C4': (44.093,96.483,112.305)
C2': (44.834,98.084,113.908)
O2': (45.512,99.305,114.132)
N1: (42.488,98.447,114.735)
N3: (40.836,99.668,115.931)
N4: (39.944,98.805,117.853)
C6: (42.451,97.456,115.678)
C5: (41.630,97.535,116.734)
O3': (45.615,98.200,111.598)
OP1: (44.877,92.894,114.935)
OP2: (43.588,94.344,116.614)
C4: (40.798,98.685,116.836)
O5': (44.053,95.168,114.324)
C3': (45.314,97.320,112.677)
C1': (43.369,98.335,113.558)
O4': (42.941,97.220,112.798)
C5': (44.057,95.092,112.887)
P: (43.806,93.877,115.222)
O2: (41.740,100.488,114.021)
C4': (44.093,96.483,112.305)
C2': (44.834,98.084,113.908)
O2': (45.512,99.305,114.132)
N1: (42.488,98.447,114.735)
N3: (40.836,99.668,115.931)
N4: (39.944,98.805,117.853)
C6: (42.451,97.456,115.678)
C5: (41.630,97.535,116.734)
O3': (45.615,98.200,111.598)
C4: (37.282,98.083,114.049)
N3: (37.628,97.487,112.853)
OP1: (40.548,94.240,119.872)
OP2: (39.163,96.249,119.078)
C2: (38.233,96.267,112.691)
C1': (39.102,94.247,113.754)
C3': (41.214,93.961,114.797)
O5': (39.938,94.512,117.450)
O4': (38.902,93.562,114.980)
C5': (40.162,93.154,117.003)
P: (39.523,94.816,118.960)
C4': (40.174,93.091,115.489)
C2': (40.596,94.198,113.421)
O2': (40.820,93.131,112.523)
N1: (38.507,95.588,113.862)
O4: (36.720,99.174,114.041)
O2: (38.504,95.824,111.596)
C6: (38.213,96.142,115.084)
C5: (37.628,97.331,115.214)
O3': (42.438,93.241,114.677)
N3: (37.628,97.487,112.853)
OP1: (40.548,94.240,119.872)
OP2: (39.163,96.249,119.078)
C2: (38.233,96.267,112.691)
C1': (39.102,94.247,113.754)
C3': (41.214,93.961,114.797)
O5': (39.938,94.512,117.450)
O4': (38.902,93.562,114.980)
C5': (40.162,93.154,117.003)
P: (39.523,94.816,118.960)
C4': (40.174,93.091,115.489)
C2': (40.596,94.198,113.421)
O2': (40.820,93.131,112.523)
N1: (38.507,95.588,113.862)
O4: (36.720,99.174,114.041)
O2: (38.504,95.824,111.596)
C6: (38.213,96.142,115.084)
C5: (37.628,97.331,115.214)
O3': (42.438,93.241,114.677)
Image (generated by PyMOL):