Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01948:01923
Extra
PDB:
ATOM 1 O3' G A1947 113.429 122.866 117.356 1.00 65.17 O
ATOM 2 P C A1948 113.539 121.562 116.416 1.00 69.26 P
ATOM 3 OP1 C A1948 114.978 121.188 116.417 1.00 70.47 O
ATOM 4 OP2 C A1948 112.844 121.818 115.123 1.00 68.72 O
ATOM 5 O5' C A1948 112.738 120.421 117.191 1.00 69.31 O
ATOM 6 C5' C A1948 113.258 119.847 118.403 1.00 69.66 C
ATOM 7 C4' C A1948 112.307 118.810 118.948 1.00 70.52 C
ATOM 8 O4' C A1948 111.012 119.420 119.179 1.00 69.82 O
ATOM 9 C3' C A1948 111.994 117.626 118.050 1.00 71.89 C
ATOM 10 O3' C A1948 113.004 116.624 118.145 1.00 76.72 O
ATOM 11 C2' C A1948 110.679 117.126 118.636 1.00 71.10 C
ATOM 12 O2' C A1948 110.877 116.349 119.801 1.00 70.04 O
ATOM 13 C1' C A1948 109.995 118.442 119.021 1.00 70.13 C
ATOM 14 N1 C A1948 109.008 118.921 118.031 1.00 69.34 N
ATOM 15 C2 C A1948 107.687 118.444 118.104 1.00 69.95 C
ATOM 16 O2 C A1948 107.377 117.651 119.011 1.00 70.02 O
ATOM 17 N3 C A1948 106.781 118.860 117.185 1.00 70.19 N
ATOM 18 C4 C A1948 107.147 119.716 116.227 1.00 69.84 C
ATOM 19 N4 C A1948 106.222 120.089 115.336 1.00 68.75 N
ATOM 20 C5 C A1948 108.476 120.226 116.138 1.00 69.87 C
ATOM 21 C6 C A1948 109.364 119.807 117.051 1.00 69.67 C
ATOM 22 P U A1949 113.305 115.659 116.889 1.00 80.46 P
ATOM 23 OP1 U A1949 113.959 114.424 117.404 1.00 80.22 O
ATOM 24 OP2 U A1949 113.991 116.480 115.853 1.00 79.74 O
ATOM 25 O5' U A1949 111.869 115.254 116.328 1.00 82.80 O
TER
ATOM 1 O3' G B1922 105.996 121.029 109.961 1.00 66.44 O
ATOM 2 P U B1923 105.390 120.795 111.431 1.00 65.97 P
ATOM 3 OP1 U B1923 104.376 121.855 111.638 1.00 67.65 O
ATOM 4 OP2 U B1923 106.500 120.645 112.403 1.00 67.55 O
ATOM 5 O5' U B1923 104.609 119.412 111.319 1.00 65.55 O
ATOM 6 C5' U B1923 103.769 119.141 110.181 1.00 63.45 C
ATOM 7 C4' U B1923 102.326 118.996 110.601 1.00 61.95 C
ATOM 8 O4' U B1923 102.137 117.723 111.280 1.00 61.46 O
ATOM 9 C3' U B1923 101.763 120.074 111.524 1.00 60.36 C
ATOM 10 O3' U B1923 100.405 120.328 111.190 1.00 60.06 O
ATOM 11 C2' U B1923 101.821 119.402 112.892 1.00 60.55 C
ATOM 12 O2' U B1923 100.838 119.897 113.777 1.00 60.94 O
ATOM 13 C1' U B1923 101.522 117.946 112.532 1.00 60.31 C
ATOM 14 N1 U B1923 102.056 116.967 113.491 1.00 59.00 N
ATOM 15 C2 U B1923 101.156 116.126 114.123 1.00 59.68 C
ATOM 16 O2 U B1923 99.957 116.153 113.909 1.00 59.31 O
ATOM 17 N3 U B1923 101.713 115.248 115.017 1.00 59.74 N
ATOM 18 C4 U B1923 103.049 115.126 115.339 1.00 60.90 C
ATOM 19 O4 U B1923 103.394 114.289 116.174 1.00 63.39 O
ATOM 20 C5 U B1923 103.919 116.022 114.639 1.00 59.22 C
ATOM 21 C6 U B1923 103.406 116.888 113.761 1.00 59.45 C
ATOM 22 P A B1924 99.928 121.827 110.858 1.00 59.13 P
ATOM 23 OP1 A B1924 100.393 122.724 111.947 1.00 59.71 O
ATOM 24 OP2 A B1924 98.481 121.759 110.530 1.00 60.78 O
ATOM 25 O5' A B1924 100.726 122.208 109.532 1.00 60.15 O
TER
ATOM 2 P C A1948 113.539 121.562 116.416 1.00 69.26 P
ATOM 3 OP1 C A1948 114.978 121.188 116.417 1.00 70.47 O
ATOM 4 OP2 C A1948 112.844 121.818 115.123 1.00 68.72 O
ATOM 5 O5' C A1948 112.738 120.421 117.191 1.00 69.31 O
ATOM 6 C5' C A1948 113.258 119.847 118.403 1.00 69.66 C
ATOM 7 C4' C A1948 112.307 118.810 118.948 1.00 70.52 C
ATOM 8 O4' C A1948 111.012 119.420 119.179 1.00 69.82 O
ATOM 9 C3' C A1948 111.994 117.626 118.050 1.00 71.89 C
ATOM 10 O3' C A1948 113.004 116.624 118.145 1.00 76.72 O
ATOM 11 C2' C A1948 110.679 117.126 118.636 1.00 71.10 C
ATOM 12 O2' C A1948 110.877 116.349 119.801 1.00 70.04 O
ATOM 13 C1' C A1948 109.995 118.442 119.021 1.00 70.13 C
ATOM 14 N1 C A1948 109.008 118.921 118.031 1.00 69.34 N
ATOM 15 C2 C A1948 107.687 118.444 118.104 1.00 69.95 C
ATOM 16 O2 C A1948 107.377 117.651 119.011 1.00 70.02 O
ATOM 17 N3 C A1948 106.781 118.860 117.185 1.00 70.19 N
ATOM 18 C4 C A1948 107.147 119.716 116.227 1.00 69.84 C
ATOM 19 N4 C A1948 106.222 120.089 115.336 1.00 68.75 N
ATOM 20 C5 C A1948 108.476 120.226 116.138 1.00 69.87 C
ATOM 21 C6 C A1948 109.364 119.807 117.051 1.00 69.67 C
ATOM 22 P U A1949 113.305 115.659 116.889 1.00 80.46 P
ATOM 23 OP1 U A1949 113.959 114.424 117.404 1.00 80.22 O
ATOM 24 OP2 U A1949 113.991 116.480 115.853 1.00 79.74 O
ATOM 25 O5' U A1949 111.869 115.254 116.328 1.00 82.80 O
TER
ATOM 1 O3' G B1922 105.996 121.029 109.961 1.00 66.44 O
ATOM 2 P U B1923 105.390 120.795 111.431 1.00 65.97 P
ATOM 3 OP1 U B1923 104.376 121.855 111.638 1.00 67.65 O
ATOM 4 OP2 U B1923 106.500 120.645 112.403 1.00 67.55 O
ATOM 5 O5' U B1923 104.609 119.412 111.319 1.00 65.55 O
ATOM 6 C5' U B1923 103.769 119.141 110.181 1.00 63.45 C
ATOM 7 C4' U B1923 102.326 118.996 110.601 1.00 61.95 C
ATOM 8 O4' U B1923 102.137 117.723 111.280 1.00 61.46 O
ATOM 9 C3' U B1923 101.763 120.074 111.524 1.00 60.36 C
ATOM 10 O3' U B1923 100.405 120.328 111.190 1.00 60.06 O
ATOM 11 C2' U B1923 101.821 119.402 112.892 1.00 60.55 C
ATOM 12 O2' U B1923 100.838 119.897 113.777 1.00 60.94 O
ATOM 13 C1' U B1923 101.522 117.946 112.532 1.00 60.31 C
ATOM 14 N1 U B1923 102.056 116.967 113.491 1.00 59.00 N
ATOM 15 C2 U B1923 101.156 116.126 114.123 1.00 59.68 C
ATOM 16 O2 U B1923 99.957 116.153 113.909 1.00 59.31 O
ATOM 17 N3 U B1923 101.713 115.248 115.017 1.00 59.74 N
ATOM 18 C4 U B1923 103.049 115.126 115.339 1.00 60.90 C
ATOM 19 O4 U B1923 103.394 114.289 116.174 1.00 63.39 O
ATOM 20 C5 U B1923 103.919 116.022 114.639 1.00 59.22 C
ATOM 21 C6 U B1923 103.406 116.888 113.761 1.00 59.45 C
ATOM 22 P A B1924 99.928 121.827 110.858 1.00 59.13 P
ATOM 23 OP1 A B1924 100.393 122.724 111.947 1.00 59.71 O
ATOM 24 OP2 A B1924 98.481 121.759 110.530 1.00 60.78 O
ATOM 25 O5' A B1924 100.726 122.208 109.532 1.00 60.15 O
TER
Atoms:
C2: (107.687,118.444,118.104)
OP1: (114.978,121.188,116.417)
OP2: (112.844,121.818,115.123)
C4: (107.147,119.716,116.227)
O5': (112.738,120.421,117.191)
C3': (111.994,117.626,118.050)
C1': (109.995,118.442,119.021)
O4': (111.012,119.420,119.179)
C5': (113.258,119.847,118.403)
P: (113.539,121.562,116.416)
O2: (107.377,117.651,119.011)
C4': (112.307,118.810,118.948)
C2': (110.679,117.126,118.636)
O2': (110.877,116.349,119.801)
N1: (109.008,118.921,118.031)
N3: (106.781,118.860,117.185)
N4: (106.222,120.089,115.336)
C6: (109.364,119.807,117.051)
C5: (108.476,120.226,116.138)
O3': (113.004,116.624,118.145)
OP1: (114.978,121.188,116.417)
OP2: (112.844,121.818,115.123)
C4: (107.147,119.716,116.227)
O5': (112.738,120.421,117.191)
C3': (111.994,117.626,118.050)
C1': (109.995,118.442,119.021)
O4': (111.012,119.420,119.179)
C5': (113.258,119.847,118.403)
P: (113.539,121.562,116.416)
O2: (107.377,117.651,119.011)
C4': (112.307,118.810,118.948)
C2': (110.679,117.126,118.636)
O2': (110.877,116.349,119.801)
N1: (109.008,118.921,118.031)
N3: (106.781,118.860,117.185)
N4: (106.222,120.089,115.336)
C6: (109.364,119.807,117.051)
C5: (108.476,120.226,116.138)
O3': (113.004,116.624,118.145)
C4: (103.049,115.126,115.339)
N3: (101.713,115.248,115.017)
OP1: (104.376,121.855,111.638)
OP2: (106.500,120.645,112.403)
C2: (101.156,116.126,114.123)
C1': (101.522,117.946,112.532)
C3': (101.763,120.074,111.524)
O5': (104.609,119.412,111.319)
O4': (102.137,117.723,111.280)
C5': (103.769,119.141,110.181)
P: (105.390,120.795,111.431)
C4': (102.326,118.996,110.601)
C2': (101.821,119.402,112.892)
O2': (100.838,119.897,113.777)
N1: (102.056,116.967,113.491)
O4: (103.394,114.289,116.174)
O2: (99.957,116.153,113.909)
C6: (103.406,116.888,113.761)
C5: (103.919,116.022,114.639)
O3': (100.405,120.328,111.190)
N3: (101.713,115.248,115.017)
OP1: (104.376,121.855,111.638)
OP2: (106.500,120.645,112.403)
C2: (101.156,116.126,114.123)
C1': (101.522,117.946,112.532)
C3': (101.763,120.074,111.524)
O5': (104.609,119.412,111.319)
O4': (102.137,117.723,111.280)
C5': (103.769,119.141,110.181)
P: (105.390,120.795,111.431)
C4': (102.326,118.996,110.601)
C2': (101.821,119.402,112.892)
O2': (100.838,119.897,113.777)
N1: (102.056,116.967,113.491)
O4: (103.394,114.289,116.174)
O2: (99.957,116.153,113.909)
C6: (103.406,116.888,113.761)
C5: (103.919,116.022,114.639)
O3': (100.405,120.328,111.190)
Image (generated by PyMOL):