Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.543 93.434 114.830 1.00 49.35 O
ATOM 2 P C A1085 43.915 94.058 115.385 1.00 49.78 P
ATOM 3 OP1 C A1085 44.962 93.043 115.121 1.00 50.42 O
ATOM 4 OP2 C A1085 43.694 94.546 116.767 1.00 52.82 O
ATOM 5 O5' C A1085 44.209 95.326 114.470 1.00 51.97 O
ATOM 6 C5' C A1085 44.201 95.231 113.035 1.00 51.67 C
ATOM 7 C4' C A1085 44.189 96.615 112.435 1.00 53.09 C
ATOM 8 O4' C A1085 43.040 97.330 112.968 1.00 52.68 O
ATOM 9 C3' C A1085 45.406 97.478 112.757 1.00 53.41 C
ATOM 10 O3' C A1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 11 C2' C A1085 44.957 98.233 114.007 1.00 54.13 C
ATOM 12 O2' C A1085 45.643 99.454 114.229 1.00 52.26 O
ATOM 13 C1' C A1085 43.473 98.454 113.711 1.00 53.84 C
ATOM 14 N1 C A1085 42.622 98.550 114.911 1.00 54.43 N
ATOM 15 C2 C A1085 41.759 99.649 115.049 1.00 55.07 C
ATOM 16 O2 C A1085 41.760 100.535 114.178 1.00 56.69 O
ATOM 17 N3 C A1085 40.948 99.720 116.129 1.00 55.38 N
ATOM 18 C4 C A1085 40.982 98.756 117.054 1.00 54.09 C
ATOM 19 N4 C A1085 40.152 98.858 118.092 1.00 53.21 N
ATOM 20 C5 C A1085 41.863 97.642 116.951 1.00 55.23 C
ATOM 21 C6 C A1085 42.658 97.578 115.873 1.00 54.38 C
ATOM 22 P C A1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 23 OP1 C A1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 24 OP2 C A1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 25 O5' C A1086 47.962 99.261 112.149 1.00 52.48 O
TER
ATOM 1 O3' A B1083 38.270 94.144 119.309 1.00 46.58 O
ATOM 2 P U B1084 39.608 94.994 119.110 1.00 46.08 P
ATOM 3 OP1 U B1084 40.652 94.422 119.997 1.00 47.35 O
ATOM 4 OP2 U B1084 39.228 96.416 119.251 1.00 44.73 O
ATOM 5 O5' U B1084 39.996 94.705 117.590 1.00 45.74 O
ATOM 6 C5' U B1084 40.250 93.351 117.136 1.00 45.23 C
ATOM 7 C4' U B1084 40.278 93.297 115.621 1.00 46.87 C
ATOM 8 O4' U B1084 39.012 93.774 115.100 1.00 47.49 O
ATOM 9 C3' U B1084 41.324 94.163 114.935 1.00 46.43 C
ATOM 10 O3' U B1084 42.543 93.434 114.830 1.00 49.35 O
ATOM 11 C2' U B1084 40.721 94.375 113.547 1.00 46.76 C
ATOM 12 O2' U B1084 40.956 93.289 112.669 1.00 47.98 O
ATOM 13 C1' U B1084 39.224 94.432 113.861 1.00 45.44 C
ATOM 14 N1 U B1084 38.645 95.782 113.937 1.00 42.74 N
ATOM 15 C2 U B1084 38.306 96.406 112.749 1.00 41.75 C
ATOM 16 O2 U B1084 38.519 95.915 111.664 1.00 44.17 O
ATOM 17 N3 U B1084 37.699 97.627 112.886 1.00 41.70 N
ATOM 18 C4 U B1084 37.404 98.271 114.068 1.00 43.30 C
ATOM 19 O4 U B1084 36.813 99.349 114.036 1.00 46.70 O
ATOM 20 C5 U B1084 37.830 97.588 115.248 1.00 42.57 C
ATOM 21 C6 U B1084 38.426 96.400 115.146 1.00 41.82 C
ATOM 22 P C B1085 43.915 94.058 115.385 1.00 49.78 P
ATOM 23 OP1 C B1085 44.962 93.043 115.121 1.00 50.42 O
ATOM 24 OP2 C B1085 43.694 94.546 116.767 1.00 52.82 O
ATOM 25 O5' C B1085 44.209 95.326 114.470 1.00 51.97 O
TER
ATOM 2 P C A1085 43.915 94.058 115.385 1.00 49.78 P
ATOM 3 OP1 C A1085 44.962 93.043 115.121 1.00 50.42 O
ATOM 4 OP2 C A1085 43.694 94.546 116.767 1.00 52.82 O
ATOM 5 O5' C A1085 44.209 95.326 114.470 1.00 51.97 O
ATOM 6 C5' C A1085 44.201 95.231 113.035 1.00 51.67 C
ATOM 7 C4' C A1085 44.189 96.615 112.435 1.00 53.09 C
ATOM 8 O4' C A1085 43.040 97.330 112.968 1.00 52.68 O
ATOM 9 C3' C A1085 45.406 97.478 112.757 1.00 53.41 C
ATOM 10 O3' C A1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 11 C2' C A1085 44.957 98.233 114.007 1.00 54.13 C
ATOM 12 O2' C A1085 45.643 99.454 114.229 1.00 52.26 O
ATOM 13 C1' C A1085 43.473 98.454 113.711 1.00 53.84 C
ATOM 14 N1 C A1085 42.622 98.550 114.911 1.00 54.43 N
ATOM 15 C2 C A1085 41.759 99.649 115.049 1.00 55.07 C
ATOM 16 O2 C A1085 41.760 100.535 114.178 1.00 56.69 O
ATOM 17 N3 C A1085 40.948 99.720 116.129 1.00 55.38 N
ATOM 18 C4 C A1085 40.982 98.756 117.054 1.00 54.09 C
ATOM 19 N4 C A1085 40.152 98.858 118.092 1.00 53.21 N
ATOM 20 C5 C A1085 41.863 97.642 116.951 1.00 55.23 C
ATOM 21 C6 C A1085 42.658 97.578 115.873 1.00 54.38 C
ATOM 22 P C A1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 23 OP1 C A1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 24 OP2 C A1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 25 O5' C A1086 47.962 99.261 112.149 1.00 52.48 O
TER
ATOM 1 O3' A B1083 38.270 94.144 119.309 1.00 46.58 O
ATOM 2 P U B1084 39.608 94.994 119.110 1.00 46.08 P
ATOM 3 OP1 U B1084 40.652 94.422 119.997 1.00 47.35 O
ATOM 4 OP2 U B1084 39.228 96.416 119.251 1.00 44.73 O
ATOM 5 O5' U B1084 39.996 94.705 117.590 1.00 45.74 O
ATOM 6 C5' U B1084 40.250 93.351 117.136 1.00 45.23 C
ATOM 7 C4' U B1084 40.278 93.297 115.621 1.00 46.87 C
ATOM 8 O4' U B1084 39.012 93.774 115.100 1.00 47.49 O
ATOM 9 C3' U B1084 41.324 94.163 114.935 1.00 46.43 C
ATOM 10 O3' U B1084 42.543 93.434 114.830 1.00 49.35 O
ATOM 11 C2' U B1084 40.721 94.375 113.547 1.00 46.76 C
ATOM 12 O2' U B1084 40.956 93.289 112.669 1.00 47.98 O
ATOM 13 C1' U B1084 39.224 94.432 113.861 1.00 45.44 C
ATOM 14 N1 U B1084 38.645 95.782 113.937 1.00 42.74 N
ATOM 15 C2 U B1084 38.306 96.406 112.749 1.00 41.75 C
ATOM 16 O2 U B1084 38.519 95.915 111.664 1.00 44.17 O
ATOM 17 N3 U B1084 37.699 97.627 112.886 1.00 41.70 N
ATOM 18 C4 U B1084 37.404 98.271 114.068 1.00 43.30 C
ATOM 19 O4 U B1084 36.813 99.349 114.036 1.00 46.70 O
ATOM 20 C5 U B1084 37.830 97.588 115.248 1.00 42.57 C
ATOM 21 C6 U B1084 38.426 96.400 115.146 1.00 41.82 C
ATOM 22 P C B1085 43.915 94.058 115.385 1.00 49.78 P
ATOM 23 OP1 C B1085 44.962 93.043 115.121 1.00 50.42 O
ATOM 24 OP2 C B1085 43.694 94.546 116.767 1.00 52.82 O
ATOM 25 O5' C B1085 44.209 95.326 114.470 1.00 51.97 O
TER
Atoms:
C2: (41.759,99.649,115.049)
OP1: (44.962,93.043,115.121)
OP2: (43.694,94.546,116.767)
C4: (40.982,98.756,117.054)
O5': (44.209,95.326,114.470)
C3': (45.406,97.478,112.757)
C1': (43.473,98.454,113.711)
O4': (43.040,97.330,112.968)
C5': (44.201,95.231,113.035)
P: (43.915,94.058,115.385)
O2: (41.760,100.535,114.178)
C4': (44.189,96.615,112.435)
C2': (44.957,98.233,114.007)
O2': (45.643,99.454,114.229)
N1: (42.622,98.550,114.911)
N3: (40.948,99.720,116.129)
N4: (40.152,98.858,118.092)
C6: (42.658,97.578,115.873)
C5: (41.863,97.642,116.951)
O3': (45.660,98.362,111.667)
OP1: (44.962,93.043,115.121)
OP2: (43.694,94.546,116.767)
C4: (40.982,98.756,117.054)
O5': (44.209,95.326,114.470)
C3': (45.406,97.478,112.757)
C1': (43.473,98.454,113.711)
O4': (43.040,97.330,112.968)
C5': (44.201,95.231,113.035)
P: (43.915,94.058,115.385)
O2: (41.760,100.535,114.178)
C4': (44.189,96.615,112.435)
C2': (44.957,98.233,114.007)
O2': (45.643,99.454,114.229)
N1: (42.622,98.550,114.911)
N3: (40.948,99.720,116.129)
N4: (40.152,98.858,118.092)
C6: (42.658,97.578,115.873)
C5: (41.863,97.642,116.951)
O3': (45.660,98.362,111.667)
C4: (37.404,98.271,114.068)
N3: (37.699,97.627,112.886)
OP1: (40.652,94.422,119.997)
OP2: (39.228,96.416,119.251)
C2: (38.306,96.406,112.749)
C1': (39.224,94.432,113.861)
C3': (41.324,94.163,114.935)
O5': (39.996,94.705,117.590)
O4': (39.012,93.774,115.100)
C5': (40.250,93.351,117.136)
P: (39.608,94.994,119.110)
C4': (40.278,93.297,115.621)
C2': (40.721,94.375,113.547)
O2': (40.956,93.289,112.669)
N1: (38.645,95.782,113.937)
O4: (36.813,99.349,114.036)
O2: (38.519,95.915,111.664)
C6: (38.426,96.400,115.146)
C5: (37.830,97.588,115.248)
O3': (42.543,93.434,114.830)
N3: (37.699,97.627,112.886)
OP1: (40.652,94.422,119.997)
OP2: (39.228,96.416,119.251)
C2: (38.306,96.406,112.749)
C1': (39.224,94.432,113.861)
C3': (41.324,94.163,114.935)
O5': (39.996,94.705,117.590)
O4': (39.012,93.774,115.100)
C5': (40.250,93.351,117.136)
P: (39.608,94.994,119.110)
C4': (40.278,93.297,115.621)
C2': (40.721,94.375,113.547)
O2': (40.956,93.289,112.669)
N1: (38.645,95.782,113.937)
O4: (36.813,99.349,114.036)
O2: (38.519,95.915,111.664)
C6: (38.426,96.400,115.146)
C5: (37.830,97.588,115.248)
O3': (42.543,93.434,114.830)
Image (generated by PyMOL):