Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.653 93.813 114.850 1.00 47.84 O
ATOM 2 P C A1085 44.014 94.442 115.414 1.00 51.45 P
ATOM 3 OP1 C A1085 45.089 93.458 115.147 1.00 49.42 O
ATOM 4 OP2 C A1085 43.773 94.912 116.803 1.00 52.23 O
ATOM 5 O5' C A1085 44.274 95.731 114.516 1.00 51.81 O
ATOM 6 C5' C A1085 44.278 95.649 113.080 1.00 50.80 C
ATOM 7 C4' C A1085 44.304 97.038 112.486 1.00 49.82 C
ATOM 8 O4' C A1085 43.157 97.781 112.984 1.00 49.60 O
ATOM 9 C3' C A1085 45.525 97.881 112.830 1.00 49.53 C
ATOM 10 O3' C A1085 45.783 98.754 111.736 1.00 49.52 O
ATOM 11 C2' C A1085 45.066 98.642 114.074 1.00 50.78 C
ATOM 12 O2' C A1085 45.750 99.862 114.310 1.00 47.60 O
ATOM 13 C1' C A1085 43.592 98.890 113.751 1.00 49.95 C
ATOM 14 N1 C A1085 42.720 98.987 114.938 1.00 50.32 N
ATOM 15 C2 C A1085 41.842 100.079 115.053 1.00 50.56 C
ATOM 16 O2 C A1085 41.867 100.969 114.188 1.00 51.87 O
ATOM 17 N3 C A1085 40.996 100.137 116.108 1.00 49.78 N
ATOM 18 C4 C A1085 41.017 99.172 117.034 1.00 48.74 C
ATOM 19 N4 C A1085 40.149 99.254 118.044 1.00 47.05 N
ATOM 20 C5 C A1085 41.923 98.076 116.961 1.00 48.75 C
ATOM 21 C6 C A1085 42.747 98.021 115.906 1.00 49.32 C
ATOM 22 P C A1086 47.255 98.820 111.104 1.00 50.07 P
ATOM 23 OP1 C A1086 47.178 99.635 109.865 1.00 52.19 O
ATOM 24 OP2 C A1086 47.797 97.439 111.042 1.00 50.51 O
ATOM 25 O5' C A1086 48.077 99.650 112.184 1.00 48.55 O
TER
ATOM 1 O3' A B1083 38.397 94.537 119.336 1.00 46.41 O
ATOM 2 P U B1084 39.764 95.349 119.159 1.00 46.06 P
ATOM 3 OP1 U B1084 40.783 94.739 120.056 1.00 45.28 O
ATOM 4 OP2 U B1084 39.429 96.785 119.287 1.00 43.56 O
ATOM 5 O5' U B1084 40.160 95.069 117.641 1.00 45.89 O
ATOM 6 C5' U B1084 40.425 93.726 117.185 1.00 44.85 C
ATOM 7 C4' U B1084 40.396 93.676 115.677 1.00 46.50 C
ATOM 8 O4' U B1084 39.133 94.216 115.217 1.00 47.23 O
ATOM 9 C3' U B1084 41.434 94.533 114.969 1.00 47.12 C
ATOM 10 O3' U B1084 42.653 93.813 114.850 1.00 47.84 O
ATOM 11 C2' U B1084 40.801 94.754 113.598 1.00 46.78 C
ATOM 12 O2' U B1084 40.981 93.649 112.729 1.00 46.70 O
ATOM 13 C1' U B1084 39.316 94.841 113.957 1.00 45.29 C
ATOM 14 N1 U B1084 38.734 96.190 114.006 1.00 42.17 N
ATOM 15 C2 U B1084 38.376 96.778 112.807 1.00 41.20 C
ATOM 16 O2 U B1084 38.573 96.250 111.729 1.00 43.91 O
ATOM 17 N3 U B1084 37.782 98.006 112.918 1.00 39.54 N
ATOM 18 C4 U B1084 37.525 98.696 114.084 1.00 41.73 C
ATOM 19 O4 U B1084 36.962 99.787 114.030 1.00 42.80 O
ATOM 20 C5 U B1084 37.957 98.039 115.278 1.00 40.89 C
ATOM 21 C6 U B1084 38.529 96.839 115.200 1.00 41.55 C
ATOM 22 P C B1085 44.014 94.442 115.414 1.00 51.45 P
ATOM 23 OP1 C B1085 45.089 93.458 115.147 1.00 49.42 O
ATOM 24 OP2 C B1085 43.773 94.912 116.803 1.00 52.23 O
ATOM 25 O5' C B1085 44.274 95.731 114.516 1.00 51.81 O
TER
ATOM 2 P C A1085 44.014 94.442 115.414 1.00 51.45 P
ATOM 3 OP1 C A1085 45.089 93.458 115.147 1.00 49.42 O
ATOM 4 OP2 C A1085 43.773 94.912 116.803 1.00 52.23 O
ATOM 5 O5' C A1085 44.274 95.731 114.516 1.00 51.81 O
ATOM 6 C5' C A1085 44.278 95.649 113.080 1.00 50.80 C
ATOM 7 C4' C A1085 44.304 97.038 112.486 1.00 49.82 C
ATOM 8 O4' C A1085 43.157 97.781 112.984 1.00 49.60 O
ATOM 9 C3' C A1085 45.525 97.881 112.830 1.00 49.53 C
ATOM 10 O3' C A1085 45.783 98.754 111.736 1.00 49.52 O
ATOM 11 C2' C A1085 45.066 98.642 114.074 1.00 50.78 C
ATOM 12 O2' C A1085 45.750 99.862 114.310 1.00 47.60 O
ATOM 13 C1' C A1085 43.592 98.890 113.751 1.00 49.95 C
ATOM 14 N1 C A1085 42.720 98.987 114.938 1.00 50.32 N
ATOM 15 C2 C A1085 41.842 100.079 115.053 1.00 50.56 C
ATOM 16 O2 C A1085 41.867 100.969 114.188 1.00 51.87 O
ATOM 17 N3 C A1085 40.996 100.137 116.108 1.00 49.78 N
ATOM 18 C4 C A1085 41.017 99.172 117.034 1.00 48.74 C
ATOM 19 N4 C A1085 40.149 99.254 118.044 1.00 47.05 N
ATOM 20 C5 C A1085 41.923 98.076 116.961 1.00 48.75 C
ATOM 21 C6 C A1085 42.747 98.021 115.906 1.00 49.32 C
ATOM 22 P C A1086 47.255 98.820 111.104 1.00 50.07 P
ATOM 23 OP1 C A1086 47.178 99.635 109.865 1.00 52.19 O
ATOM 24 OP2 C A1086 47.797 97.439 111.042 1.00 50.51 O
ATOM 25 O5' C A1086 48.077 99.650 112.184 1.00 48.55 O
TER
ATOM 1 O3' A B1083 38.397 94.537 119.336 1.00 46.41 O
ATOM 2 P U B1084 39.764 95.349 119.159 1.00 46.06 P
ATOM 3 OP1 U B1084 40.783 94.739 120.056 1.00 45.28 O
ATOM 4 OP2 U B1084 39.429 96.785 119.287 1.00 43.56 O
ATOM 5 O5' U B1084 40.160 95.069 117.641 1.00 45.89 O
ATOM 6 C5' U B1084 40.425 93.726 117.185 1.00 44.85 C
ATOM 7 C4' U B1084 40.396 93.676 115.677 1.00 46.50 C
ATOM 8 O4' U B1084 39.133 94.216 115.217 1.00 47.23 O
ATOM 9 C3' U B1084 41.434 94.533 114.969 1.00 47.12 C
ATOM 10 O3' U B1084 42.653 93.813 114.850 1.00 47.84 O
ATOM 11 C2' U B1084 40.801 94.754 113.598 1.00 46.78 C
ATOM 12 O2' U B1084 40.981 93.649 112.729 1.00 46.70 O
ATOM 13 C1' U B1084 39.316 94.841 113.957 1.00 45.29 C
ATOM 14 N1 U B1084 38.734 96.190 114.006 1.00 42.17 N
ATOM 15 C2 U B1084 38.376 96.778 112.807 1.00 41.20 C
ATOM 16 O2 U B1084 38.573 96.250 111.729 1.00 43.91 O
ATOM 17 N3 U B1084 37.782 98.006 112.918 1.00 39.54 N
ATOM 18 C4 U B1084 37.525 98.696 114.084 1.00 41.73 C
ATOM 19 O4 U B1084 36.962 99.787 114.030 1.00 42.80 O
ATOM 20 C5 U B1084 37.957 98.039 115.278 1.00 40.89 C
ATOM 21 C6 U B1084 38.529 96.839 115.200 1.00 41.55 C
ATOM 22 P C B1085 44.014 94.442 115.414 1.00 51.45 P
ATOM 23 OP1 C B1085 45.089 93.458 115.147 1.00 49.42 O
ATOM 24 OP2 C B1085 43.773 94.912 116.803 1.00 52.23 O
ATOM 25 O5' C B1085 44.274 95.731 114.516 1.00 51.81 O
TER
Atoms:
C2: (41.842,100.079,115.053)
OP1: (45.089,93.458,115.147)
OP2: (43.773,94.912,116.803)
C4: (41.017,99.172,117.034)
O5': (44.274,95.731,114.516)
C3': (45.525,97.881,112.830)
C1': (43.592,98.890,113.751)
O4': (43.157,97.781,112.984)
C5': (44.278,95.649,113.080)
P: (44.014,94.442,115.414)
O2: (41.867,100.969,114.188)
C4': (44.304,97.038,112.486)
C2': (45.066,98.642,114.074)
O2': (45.750,99.862,114.310)
N1: (42.720,98.987,114.938)
N3: (40.996,100.137,116.108)
N4: (40.149,99.254,118.044)
C6: (42.747,98.021,115.906)
C5: (41.923,98.076,116.961)
O3': (45.783,98.754,111.736)
OP1: (45.089,93.458,115.147)
OP2: (43.773,94.912,116.803)
C4: (41.017,99.172,117.034)
O5': (44.274,95.731,114.516)
C3': (45.525,97.881,112.830)
C1': (43.592,98.890,113.751)
O4': (43.157,97.781,112.984)
C5': (44.278,95.649,113.080)
P: (44.014,94.442,115.414)
O2: (41.867,100.969,114.188)
C4': (44.304,97.038,112.486)
C2': (45.066,98.642,114.074)
O2': (45.750,99.862,114.310)
N1: (42.720,98.987,114.938)
N3: (40.996,100.137,116.108)
N4: (40.149,99.254,118.044)
C6: (42.747,98.021,115.906)
C5: (41.923,98.076,116.961)
O3': (45.783,98.754,111.736)
C4: (37.525,98.696,114.084)
N3: (37.782,98.006,112.918)
OP1: (40.783,94.739,120.056)
OP2: (39.429,96.785,119.287)
C2: (38.376,96.778,112.807)
C1': (39.316,94.841,113.957)
C3': (41.434,94.533,114.969)
O5': (40.160,95.069,117.641)
O4': (39.133,94.216,115.217)
C5': (40.425,93.726,117.185)
P: (39.764,95.349,119.159)
C4': (40.396,93.676,115.677)
C2': (40.801,94.754,113.598)
O2': (40.981,93.649,112.729)
N1: (38.734,96.190,114.006)
O4: (36.962,99.787,114.030)
O2: (38.573,96.250,111.729)
C6: (38.529,96.839,115.200)
C5: (37.957,98.039,115.278)
O3': (42.653,93.813,114.850)
N3: (37.782,98.006,112.918)
OP1: (40.783,94.739,120.056)
OP2: (39.429,96.785,119.287)
C2: (38.376,96.778,112.807)
C1': (39.316,94.841,113.957)
C3': (41.434,94.533,114.969)
O5': (40.160,95.069,117.641)
O4': (39.133,94.216,115.217)
C5': (40.425,93.726,117.185)
P: (39.764,95.349,119.159)
C4': (40.396,93.676,115.677)
C2': (40.801,94.754,113.598)
O2': (40.981,93.649,112.729)
N1: (38.734,96.190,114.006)
O4: (36.962,99.787,114.030)
O2: (38.573,96.250,111.729)
C6: (38.529,96.839,115.200)
C5: (37.957,98.039,115.278)
O3': (42.653,93.813,114.850)
Image (generated by PyMOL):