Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.496 121.266 104.181 1.00 38.57 O
ATOM 2 P C A2023 34.560 120.420 105.171 1.00 38.75 P
ATOM 3 OP1 C A2023 33.187 120.479 104.638 1.00 39.23 O
ATOM 4 OP2 C A2023 34.831 120.931 106.538 1.00 41.18 O
ATOM 5 O5' C A2023 35.157 118.941 105.111 1.00 36.56 O
ATOM 6 C5' C A2023 34.585 117.918 104.271 1.00 35.47 C
ATOM 7 C4' C A2023 34.998 116.546 104.767 1.00 35.11 C
ATOM 8 O4' C A2023 36.438 116.373 104.651 1.00 35.61 O
ATOM 9 C3' C A2023 34.695 116.326 106.238 1.00 35.58 C
ATOM 10 O3' C A2023 33.368 115.847 106.381 1.00 37.07 O
ATOM 11 C2' C A2023 35.732 115.292 106.652 1.00 35.18 C
ATOM 12 O2' C A2023 35.363 113.971 106.329 1.00 33.63 O
ATOM 13 C1' C A2023 36.936 115.708 105.803 1.00 34.96 C
ATOM 14 N1 C A2023 37.880 116.611 106.495 1.00 37.02 N
ATOM 15 C2 C A2023 38.672 116.107 107.549 1.00 38.67 C
ATOM 16 O2 C A2023 38.528 114.925 107.913 1.00 37.45 O
ATOM 17 N3 C A2023 39.566 116.928 108.149 1.00 38.43 N
ATOM 18 C4 C A2023 39.678 118.197 107.755 1.00 38.58 C
ATOM 19 N4 C A2023 40.575 118.972 108.376 1.00 38.28 N
ATOM 20 C5 C A2023 38.877 118.733 106.707 1.00 38.63 C
ATOM 21 C6 C A2023 38.001 117.917 106.113 1.00 37.22 C
ATOM 22 P U A2024 32.400 116.487 107.484 1.00 40.15 P
ATOM 23 OP1 U A2024 31.043 115.986 107.142 1.00 42.24 O
ATOM 24 OP2 U A2024 32.638 117.946 107.594 1.00 41.67 O
ATOM 25 O5' U A2024 32.865 115.803 108.843 1.00 37.96 O
TER
ATOM 1 O3' G B2021 40.574 124.072 107.460 1.00 40.20 O
ATOM 2 P U B2022 40.396 122.579 106.904 1.00 38.07 P
ATOM 3 OP1 U B2022 39.974 121.743 108.039 1.00 39.88 O
ATOM 4 OP2 U B2022 41.602 122.209 106.132 1.00 38.51 O
ATOM 5 O5' U B2022 39.196 122.679 105.867 1.00 39.76 O
ATOM 6 C5' U B2022 37.904 123.136 106.266 1.00 37.67 C
ATOM 7 C4' U B2022 36.929 122.962 105.132 1.00 39.20 C
ATOM 8 O4' U B2022 37.333 123.818 104.023 1.00 39.76 O
ATOM 9 C3' U B2022 36.834 121.544 104.563 1.00 39.34 C
ATOM 10 O3' U B2022 35.496 121.266 104.181 1.00 38.57 O
ATOM 11 C2' U B2022 37.731 121.608 103.335 1.00 39.53 C
ATOM 12 O2' U B2022 37.383 120.690 102.323 1.00 39.90 O
ATOM 13 C1' U B2022 37.478 123.033 102.856 1.00 39.40 C
ATOM 14 N1 U B2022 38.589 123.555 102.050 1.00 38.75 N
ATOM 15 C2 U B2022 38.310 123.890 100.735 1.00 38.07 C
ATOM 16 O2 U B2022 37.196 123.819 100.255 1.00 37.49 O
ATOM 17 N3 U B2022 39.388 124.314 100.006 1.00 35.94 N
ATOM 18 C4 U B2022 40.686 124.439 100.442 1.00 35.99 C
ATOM 19 O4 U B2022 41.545 124.804 99.649 1.00 35.32 O
ATOM 20 C5 U B2022 40.896 124.114 101.822 1.00 35.36 C
ATOM 21 C6 U B2022 39.865 123.690 102.562 1.00 37.52 C
ATOM 22 P C B2023 34.560 120.420 105.171 1.00 38.75 P
ATOM 23 OP1 C B2023 33.187 120.479 104.638 1.00 39.23 O
ATOM 24 OP2 C B2023 34.831 120.931 106.538 1.00 41.18 O
ATOM 25 O5' C B2023 35.157 118.941 105.111 1.00 36.56 O
TER
ATOM 2 P C A2023 34.560 120.420 105.171 1.00 38.75 P
ATOM 3 OP1 C A2023 33.187 120.479 104.638 1.00 39.23 O
ATOM 4 OP2 C A2023 34.831 120.931 106.538 1.00 41.18 O
ATOM 5 O5' C A2023 35.157 118.941 105.111 1.00 36.56 O
ATOM 6 C5' C A2023 34.585 117.918 104.271 1.00 35.47 C
ATOM 7 C4' C A2023 34.998 116.546 104.767 1.00 35.11 C
ATOM 8 O4' C A2023 36.438 116.373 104.651 1.00 35.61 O
ATOM 9 C3' C A2023 34.695 116.326 106.238 1.00 35.58 C
ATOM 10 O3' C A2023 33.368 115.847 106.381 1.00 37.07 O
ATOM 11 C2' C A2023 35.732 115.292 106.652 1.00 35.18 C
ATOM 12 O2' C A2023 35.363 113.971 106.329 1.00 33.63 O
ATOM 13 C1' C A2023 36.936 115.708 105.803 1.00 34.96 C
ATOM 14 N1 C A2023 37.880 116.611 106.495 1.00 37.02 N
ATOM 15 C2 C A2023 38.672 116.107 107.549 1.00 38.67 C
ATOM 16 O2 C A2023 38.528 114.925 107.913 1.00 37.45 O
ATOM 17 N3 C A2023 39.566 116.928 108.149 1.00 38.43 N
ATOM 18 C4 C A2023 39.678 118.197 107.755 1.00 38.58 C
ATOM 19 N4 C A2023 40.575 118.972 108.376 1.00 38.28 N
ATOM 20 C5 C A2023 38.877 118.733 106.707 1.00 38.63 C
ATOM 21 C6 C A2023 38.001 117.917 106.113 1.00 37.22 C
ATOM 22 P U A2024 32.400 116.487 107.484 1.00 40.15 P
ATOM 23 OP1 U A2024 31.043 115.986 107.142 1.00 42.24 O
ATOM 24 OP2 U A2024 32.638 117.946 107.594 1.00 41.67 O
ATOM 25 O5' U A2024 32.865 115.803 108.843 1.00 37.96 O
TER
ATOM 1 O3' G B2021 40.574 124.072 107.460 1.00 40.20 O
ATOM 2 P U B2022 40.396 122.579 106.904 1.00 38.07 P
ATOM 3 OP1 U B2022 39.974 121.743 108.039 1.00 39.88 O
ATOM 4 OP2 U B2022 41.602 122.209 106.132 1.00 38.51 O
ATOM 5 O5' U B2022 39.196 122.679 105.867 1.00 39.76 O
ATOM 6 C5' U B2022 37.904 123.136 106.266 1.00 37.67 C
ATOM 7 C4' U B2022 36.929 122.962 105.132 1.00 39.20 C
ATOM 8 O4' U B2022 37.333 123.818 104.023 1.00 39.76 O
ATOM 9 C3' U B2022 36.834 121.544 104.563 1.00 39.34 C
ATOM 10 O3' U B2022 35.496 121.266 104.181 1.00 38.57 O
ATOM 11 C2' U B2022 37.731 121.608 103.335 1.00 39.53 C
ATOM 12 O2' U B2022 37.383 120.690 102.323 1.00 39.90 O
ATOM 13 C1' U B2022 37.478 123.033 102.856 1.00 39.40 C
ATOM 14 N1 U B2022 38.589 123.555 102.050 1.00 38.75 N
ATOM 15 C2 U B2022 38.310 123.890 100.735 1.00 38.07 C
ATOM 16 O2 U B2022 37.196 123.819 100.255 1.00 37.49 O
ATOM 17 N3 U B2022 39.388 124.314 100.006 1.00 35.94 N
ATOM 18 C4 U B2022 40.686 124.439 100.442 1.00 35.99 C
ATOM 19 O4 U B2022 41.545 124.804 99.649 1.00 35.32 O
ATOM 20 C5 U B2022 40.896 124.114 101.822 1.00 35.36 C
ATOM 21 C6 U B2022 39.865 123.690 102.562 1.00 37.52 C
ATOM 22 P C B2023 34.560 120.420 105.171 1.00 38.75 P
ATOM 23 OP1 C B2023 33.187 120.479 104.638 1.00 39.23 O
ATOM 24 OP2 C B2023 34.831 120.931 106.538 1.00 41.18 O
ATOM 25 O5' C B2023 35.157 118.941 105.111 1.00 36.56 O
TER
Atoms:
C2: (38.672,116.107,107.549)
OP1: (33.187,120.479,104.638)
OP2: (34.831,120.931,106.538)
C4: (39.678,118.197,107.755)
O5': (35.157,118.941,105.111)
C3': (34.695,116.326,106.238)
C1': (36.936,115.708,105.803)
O4': (36.438,116.373,104.651)
C5': (34.585,117.918,104.271)
P: (34.560,120.420,105.171)
O2: (38.528,114.925,107.913)
C4': (34.998,116.546,104.767)
C2': (35.732,115.292,106.652)
O2': (35.363,113.971,106.329)
N1: (37.880,116.611,106.495)
N3: (39.566,116.928,108.149)
N4: (40.575,118.972,108.376)
C6: (38.001,117.917,106.113)
C5: (38.877,118.733,106.707)
O3': (33.368,115.847,106.381)
OP1: (33.187,120.479,104.638)
OP2: (34.831,120.931,106.538)
C4: (39.678,118.197,107.755)
O5': (35.157,118.941,105.111)
C3': (34.695,116.326,106.238)
C1': (36.936,115.708,105.803)
O4': (36.438,116.373,104.651)
C5': (34.585,117.918,104.271)
P: (34.560,120.420,105.171)
O2: (38.528,114.925,107.913)
C4': (34.998,116.546,104.767)
C2': (35.732,115.292,106.652)
O2': (35.363,113.971,106.329)
N1: (37.880,116.611,106.495)
N3: (39.566,116.928,108.149)
N4: (40.575,118.972,108.376)
C6: (38.001,117.917,106.113)
C5: (38.877,118.733,106.707)
O3': (33.368,115.847,106.381)
C4: (40.686,124.439,100.442)
N3: (39.388,124.314,100.006)
OP1: (39.974,121.743,108.039)
OP2: (41.602,122.209,106.132)
C2: (38.310,123.890,100.735)
C1': (37.478,123.033,102.856)
C3': (36.834,121.544,104.563)
O5': (39.196,122.679,105.867)
O4': (37.333,123.818,104.023)
C5': (37.904,123.136,106.266)
P: (40.396,122.579,106.904)
C4': (36.929,122.962,105.132)
C2': (37.731,121.608,103.335)
O2': (37.383,120.690,102.323)
N1: (38.589,123.555,102.050)
O4: (41.545,124.804,99.649)
O2: (37.196,123.819,100.255)
C6: (39.865,123.690,102.562)
C5: (40.896,124.114,101.822)
O3': (35.496,121.266,104.181)
N3: (39.388,124.314,100.006)
OP1: (39.974,121.743,108.039)
OP2: (41.602,122.209,106.132)
C2: (38.310,123.890,100.735)
C1': (37.478,123.033,102.856)
C3': (36.834,121.544,104.563)
O5': (39.196,122.679,105.867)
O4': (37.333,123.818,104.023)
C5': (37.904,123.136,106.266)
P: (40.396,122.579,106.904)
C4': (36.929,122.962,105.132)
C2': (37.731,121.608,103.335)
O2': (37.383,120.690,102.323)
N1: (38.589,123.555,102.050)
O4: (41.545,124.804,99.649)
O2: (37.196,123.819,100.255)
C6: (39.865,123.690,102.562)
C5: (40.896,124.114,101.822)
O3': (35.496,121.266,104.181)
Image (generated by PyMOL):