Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.448 93.221 114.757 1.00 46.56 O
ATOM 2 P C A1085 43.835 93.816 115.304 1.00 48.19 P
ATOM 3 OP1 C A1085 44.882 92.802 115.029 1.00 47.28 O
ATOM 4 OP2 C A1085 43.627 94.304 116.692 1.00 49.57 O
ATOM 5 O5' C A1085 44.125 95.091 114.401 1.00 50.04 O
ATOM 6 C5' C A1085 44.108 95.011 112.967 1.00 49.46 C
ATOM 7 C4' C A1085 44.129 96.401 112.383 1.00 49.65 C
ATOM 8 O4' C A1085 42.981 97.130 112.895 1.00 49.31 O
ATOM 9 C3' C A1085 45.353 97.243 112.736 1.00 49.82 C
ATOM 10 O3' C A1085 45.630 98.120 111.649 1.00 50.33 O
ATOM 11 C2' C A1085 44.887 98.009 113.972 1.00 50.06 C
ATOM 12 O2' C A1085 45.553 99.239 114.194 1.00 49.00 O
ATOM 13 C1' C A1085 43.416 98.253 113.640 1.00 49.78 C
ATOM 14 N1 C A1085 42.554 98.372 114.828 1.00 50.84 N
ATOM 15 C2 C A1085 41.707 99.488 114.947 1.00 50.99 C
ATOM 16 O2 C A1085 41.736 100.371 114.071 1.00 52.60 O
ATOM 17 N3 C A1085 40.883 99.577 116.014 1.00 50.60 N
ATOM 18 C4 C A1085 40.888 98.620 116.945 1.00 48.79 C
ATOM 19 N4 C A1085 40.046 98.743 117.967 1.00 48.71 N
ATOM 20 C5 C A1085 41.752 97.493 116.864 1.00 50.71 C
ATOM 21 C6 C A1085 42.561 97.407 115.798 1.00 49.92 C
ATOM 22 P C A1086 47.101 98.153 111.010 1.00 49.91 P
ATOM 23 OP1 C A1086 47.007 98.940 109.756 1.00 52.68 O
ATOM 24 OP2 C A1086 47.643 96.771 110.970 1.00 51.12 O
ATOM 25 O5' C A1086 47.945 98.994 112.061 1.00 49.12 O
TER
ATOM 1 O3' A B1083 38.214 94.015 119.250 1.00 45.29 O
ATOM 2 P U B1084 39.555 94.862 119.051 1.00 45.11 P
ATOM 3 OP1 U B1084 40.588 94.289 119.950 1.00 46.93 O
ATOM 4 OP2 U B1084 39.198 96.292 119.166 1.00 45.04 O
ATOM 5 O5' U B1084 39.952 94.559 117.536 1.00 46.30 O
ATOM 6 C5' U B1084 40.204 93.202 117.100 1.00 45.13 C
ATOM 7 C4' U B1084 40.199 93.124 115.589 1.00 46.65 C
ATOM 8 O4' U B1084 38.930 93.614 115.094 1.00 46.94 O
ATOM 9 C3' U B1084 41.244 93.973 114.882 1.00 46.09 C
ATOM 10 O3' U B1084 42.448 93.221 114.757 1.00 46.56 O
ATOM 11 C2' U B1084 40.617 94.208 113.510 1.00 45.82 C
ATOM 12 O2' U B1084 40.814 93.128 112.620 1.00 46.50 O
ATOM 13 C1' U B1084 39.127 94.272 113.854 1.00 45.72 C
ATOM 14 N1 U B1084 38.528 95.613 113.925 1.00 43.15 N
ATOM 15 C2 U B1084 38.182 96.224 112.734 1.00 42.68 C
ATOM 16 O2 U B1084 38.393 95.720 111.649 1.00 45.36 O
ATOM 17 N3 U B1084 37.580 97.447 112.863 1.00 41.62 N
ATOM 18 C4 U B1084 37.289 98.104 114.040 1.00 43.28 C
ATOM 19 O4 U B1084 36.713 99.186 114.001 1.00 44.79 O
ATOM 20 C5 U B1084 37.704 97.422 115.226 1.00 42.80 C
ATOM 21 C6 U B1084 38.296 96.232 115.129 1.00 42.35 C
ATOM 22 P C B1085 43.835 93.816 115.304 1.00 48.19 P
ATOM 23 OP1 C B1085 44.882 92.802 115.029 1.00 47.28 O
ATOM 24 OP2 C B1085 43.627 94.304 116.692 1.00 49.57 O
ATOM 25 O5' C B1085 44.125 95.091 114.401 1.00 50.04 O
TER
ATOM 2 P C A1085 43.835 93.816 115.304 1.00 48.19 P
ATOM 3 OP1 C A1085 44.882 92.802 115.029 1.00 47.28 O
ATOM 4 OP2 C A1085 43.627 94.304 116.692 1.00 49.57 O
ATOM 5 O5' C A1085 44.125 95.091 114.401 1.00 50.04 O
ATOM 6 C5' C A1085 44.108 95.011 112.967 1.00 49.46 C
ATOM 7 C4' C A1085 44.129 96.401 112.383 1.00 49.65 C
ATOM 8 O4' C A1085 42.981 97.130 112.895 1.00 49.31 O
ATOM 9 C3' C A1085 45.353 97.243 112.736 1.00 49.82 C
ATOM 10 O3' C A1085 45.630 98.120 111.649 1.00 50.33 O
ATOM 11 C2' C A1085 44.887 98.009 113.972 1.00 50.06 C
ATOM 12 O2' C A1085 45.553 99.239 114.194 1.00 49.00 O
ATOM 13 C1' C A1085 43.416 98.253 113.640 1.00 49.78 C
ATOM 14 N1 C A1085 42.554 98.372 114.828 1.00 50.84 N
ATOM 15 C2 C A1085 41.707 99.488 114.947 1.00 50.99 C
ATOM 16 O2 C A1085 41.736 100.371 114.071 1.00 52.60 O
ATOM 17 N3 C A1085 40.883 99.577 116.014 1.00 50.60 N
ATOM 18 C4 C A1085 40.888 98.620 116.945 1.00 48.79 C
ATOM 19 N4 C A1085 40.046 98.743 117.967 1.00 48.71 N
ATOM 20 C5 C A1085 41.752 97.493 116.864 1.00 50.71 C
ATOM 21 C6 C A1085 42.561 97.407 115.798 1.00 49.92 C
ATOM 22 P C A1086 47.101 98.153 111.010 1.00 49.91 P
ATOM 23 OP1 C A1086 47.007 98.940 109.756 1.00 52.68 O
ATOM 24 OP2 C A1086 47.643 96.771 110.970 1.00 51.12 O
ATOM 25 O5' C A1086 47.945 98.994 112.061 1.00 49.12 O
TER
ATOM 1 O3' A B1083 38.214 94.015 119.250 1.00 45.29 O
ATOM 2 P U B1084 39.555 94.862 119.051 1.00 45.11 P
ATOM 3 OP1 U B1084 40.588 94.289 119.950 1.00 46.93 O
ATOM 4 OP2 U B1084 39.198 96.292 119.166 1.00 45.04 O
ATOM 5 O5' U B1084 39.952 94.559 117.536 1.00 46.30 O
ATOM 6 C5' U B1084 40.204 93.202 117.100 1.00 45.13 C
ATOM 7 C4' U B1084 40.199 93.124 115.589 1.00 46.65 C
ATOM 8 O4' U B1084 38.930 93.614 115.094 1.00 46.94 O
ATOM 9 C3' U B1084 41.244 93.973 114.882 1.00 46.09 C
ATOM 10 O3' U B1084 42.448 93.221 114.757 1.00 46.56 O
ATOM 11 C2' U B1084 40.617 94.208 113.510 1.00 45.82 C
ATOM 12 O2' U B1084 40.814 93.128 112.620 1.00 46.50 O
ATOM 13 C1' U B1084 39.127 94.272 113.854 1.00 45.72 C
ATOM 14 N1 U B1084 38.528 95.613 113.925 1.00 43.15 N
ATOM 15 C2 U B1084 38.182 96.224 112.734 1.00 42.68 C
ATOM 16 O2 U B1084 38.393 95.720 111.649 1.00 45.36 O
ATOM 17 N3 U B1084 37.580 97.447 112.863 1.00 41.62 N
ATOM 18 C4 U B1084 37.289 98.104 114.040 1.00 43.28 C
ATOM 19 O4 U B1084 36.713 99.186 114.001 1.00 44.79 O
ATOM 20 C5 U B1084 37.704 97.422 115.226 1.00 42.80 C
ATOM 21 C6 U B1084 38.296 96.232 115.129 1.00 42.35 C
ATOM 22 P C B1085 43.835 93.816 115.304 1.00 48.19 P
ATOM 23 OP1 C B1085 44.882 92.802 115.029 1.00 47.28 O
ATOM 24 OP2 C B1085 43.627 94.304 116.692 1.00 49.57 O
ATOM 25 O5' C B1085 44.125 95.091 114.401 1.00 50.04 O
TER
Atoms:
C2: (41.707,99.488,114.947)
OP1: (44.882,92.802,115.029)
OP2: (43.627,94.304,116.692)
C4: (40.888,98.620,116.945)
O5': (44.125,95.091,114.401)
C3': (45.353,97.243,112.736)
C1': (43.416,98.253,113.640)
O4': (42.981,97.130,112.895)
C5': (44.108,95.011,112.967)
P: (43.835,93.816,115.304)
O2: (41.736,100.371,114.071)
C4': (44.129,96.401,112.383)
C2': (44.887,98.009,113.972)
O2': (45.553,99.239,114.194)
N1: (42.554,98.372,114.828)
N3: (40.883,99.577,116.014)
N4: (40.046,98.743,117.967)
C6: (42.561,97.407,115.798)
C5: (41.752,97.493,116.864)
O3': (45.630,98.120,111.649)
OP1: (44.882,92.802,115.029)
OP2: (43.627,94.304,116.692)
C4: (40.888,98.620,116.945)
O5': (44.125,95.091,114.401)
C3': (45.353,97.243,112.736)
C1': (43.416,98.253,113.640)
O4': (42.981,97.130,112.895)
C5': (44.108,95.011,112.967)
P: (43.835,93.816,115.304)
O2: (41.736,100.371,114.071)
C4': (44.129,96.401,112.383)
C2': (44.887,98.009,113.972)
O2': (45.553,99.239,114.194)
N1: (42.554,98.372,114.828)
N3: (40.883,99.577,116.014)
N4: (40.046,98.743,117.967)
C6: (42.561,97.407,115.798)
C5: (41.752,97.493,116.864)
O3': (45.630,98.120,111.649)
C4: (37.289,98.104,114.040)
N3: (37.580,97.447,112.863)
OP1: (40.588,94.289,119.950)
OP2: (39.198,96.292,119.166)
C2: (38.182,96.224,112.734)
C1': (39.127,94.272,113.854)
C3': (41.244,93.973,114.882)
O5': (39.952,94.559,117.536)
O4': (38.930,93.614,115.094)
C5': (40.204,93.202,117.100)
P: (39.555,94.862,119.051)
C4': (40.199,93.124,115.589)
C2': (40.617,94.208,113.510)
O2': (40.814,93.128,112.620)
N1: (38.528,95.613,113.925)
O4: (36.713,99.186,114.001)
O2: (38.393,95.720,111.649)
C6: (38.296,96.232,115.129)
C5: (37.704,97.422,115.226)
O3': (42.448,93.221,114.757)
N3: (37.580,97.447,112.863)
OP1: (40.588,94.289,119.950)
OP2: (39.198,96.292,119.166)
C2: (38.182,96.224,112.734)
C1': (39.127,94.272,113.854)
C3': (41.244,93.973,114.882)
O5': (39.952,94.559,117.536)
O4': (38.930,93.614,115.094)
C5': (40.204,93.202,117.100)
P: (39.555,94.862,119.051)
C4': (40.199,93.124,115.589)
C2': (40.617,94.208,113.510)
O2': (40.814,93.128,112.620)
N1: (38.528,95.613,113.925)
O4: (36.713,99.186,114.001)
O2: (38.393,95.720,111.649)
C6: (38.296,96.232,115.129)
C5: (37.704,97.422,115.226)
O3': (42.448,93.221,114.757)
Image (generated by PyMOL):