ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01379:01378

Extra

PDB:
ATOM 1 O3' U A1378 62.998 169.515 65.758 1.00 37.99 O
ATOM 2 P C A1379 62.813 171.064 65.403 1.00 38.86 P
ATOM 3 OP1 C A1379 62.859 171.773 66.698 1.00 39.91 O
ATOM 4 OP2 C A1379 61.651 171.240 64.524 1.00 38.08 O
ATOM 5 O5' C A1379 64.124 171.401 64.564 1.00 40.24 O
ATOM 6 C5' C A1379 65.401 171.603 65.210 1.00 38.80 C
ATOM 7 C4' C A1379 66.165 172.685 64.487 1.00 38.56 C
ATOM 8 O4' C A1379 66.572 172.203 63.184 1.00 38.77 O
ATOM 9 C3' C A1379 65.337 173.934 64.226 1.00 38.37 C
ATOM 10 O3' C A1379 65.503 174.821 65.318 1.00 36.61 O
ATOM 11 C2' C A1379 65.913 174.461 62.919 1.00 38.41 C
ATOM 12 O2' C A1379 67.131 175.152 63.109 1.00 40.41 O
ATOM 13 C1' C A1379 66.236 173.153 62.192 1.00 37.93 C
ATOM 14 N1 C A1379 65.166 172.577 61.347 1.00 38.05 N
ATOM 15 C2 C A1379 64.617 173.348 60.304 1.00 38.68 C
ATOM 16 O2 C A1379 65.004 174.517 60.149 1.00 37.89 O
ATOM 17 N3 C A1379 63.680 172.795 59.497 1.00 37.95 N
ATOM 18 C4 C A1379 63.283 171.534 59.701 1.00 38.58 C
ATOM 19 N4 C A1379 62.378 171.020 58.875 1.00 37.91 N
ATOM 20 C5 C A1379 63.804 170.742 60.765 1.00 39.31 C
ATOM 21 C6 C A1379 64.729 171.298 61.557 1.00 37.56 C
ATOM 22 P C A1380 64.273 175.701 65.833 1.00 36.06 P
ATOM 23 OP1 C A1380 64.835 176.485 66.949 1.00 36.94 O
ATOM 24 OP2 C A1380 63.058 174.872 66.057 1.00 36.47 O
ATOM 25 O5' C A1380 63.962 176.653 64.598 1.00 37.45 O
TER

ATOM 1 O3' U B1377 61.784 167.967 60.030 1.00 38.19 O
ATOM 2 P U B1378 60.433 167.931 60.904 1.00 40.76 P
ATOM 3 OP1 U B1378 59.605 166.770 60.484 1.00 46.81 O
ATOM 4 OP2 U B1378 59.825 169.281 60.919 1.00 41.98 O
ATOM 5 O5' U B1378 60.920 167.572 62.373 1.00 41.09 O
ATOM 6 C5' U B1378 61.738 168.473 63.101 1.00 39.95 C
ATOM 7 C4' U B1378 62.429 167.766 64.240 1.00 36.88 C
ATOM 8 O4' U B1378 63.103 166.576 63.766 1.00 34.72 O
ATOM 9 C3' U B1378 63.539 168.633 64.793 1.00 34.48 C
ATOM 10 O3' U B1378 62.998 169.515 65.758 1.00 37.99 O
ATOM 11 C2' U B1378 64.518 167.633 65.391 1.00 34.43 C
ATOM 12 O2' U B1378 64.245 167.347 66.748 1.00 35.57 O
ATOM 13 C1' U B1378 64.301 166.404 64.494 1.00 34.46 C
ATOM 14 N1 U B1378 65.377 166.033 63.563 1.00 32.69 N
ATOM 15 C2 U B1378 65.906 166.993 62.700 1.00 31.77 C
ATOM 16 O2 U B1378 65.500 168.139 62.639 1.00 29.39 O
ATOM 17 N3 U B1378 66.937 166.547 61.909 1.00 28.83 N
ATOM 18 C4 U B1378 67.474 165.273 61.878 1.00 30.38 C
ATOM 19 O4 U B1378 68.412 165.024 61.117 1.00 29.93 O
ATOM 20 C5 U B1378 66.857 164.348 62.767 1.00 30.41 C
ATOM 21 C6 U B1378 65.858 164.750 63.559 1.00 33.49 C
ATOM 22 P C B1379 62.813 171.064 65.403 1.00 38.86 P
ATOM 23 OP1 C B1379 62.859 171.773 66.698 1.00 39.91 O
ATOM 24 OP2 C B1379 61.651 171.240 64.524 1.00 38.08 O
ATOM 25 O5' C B1379 64.124 171.401 64.564 1.00 40.24 O
TER

Atoms:
C2: (64.617,173.348,60.304)
OP1: (62.859,171.773,66.698)
OP2: (61.651,171.240,64.524)
C4: (63.283,171.534,59.701)
O5': (64.124,171.401,64.564)
C3': (65.337,173.934,64.226)
C1': (66.236,173.153,62.192)
O4': (66.572,172.203,63.184)
C5': (65.401,171.603,65.210)
P: (62.813,171.064,65.403)
O2: (65.004,174.517,60.149)
C4': (66.165,172.685,64.487)
C2': (65.913,174.461,62.919)
O2': (67.131,175.152,63.109)
N1: (65.166,172.577,61.347)
N3: (63.680,172.795,59.497)
N4: (62.378,171.020,58.875)
C6: (64.729,171.298,61.557)
C5: (63.804,170.742,60.765)
O3': (65.503,174.821,65.318)
C4: (67.474,165.273,61.878)
N3: (66.937,166.547,61.909)
OP1: (59.605,166.770,60.484)
OP2: (59.825,169.281,60.919)
C2: (65.906,166.993,62.700)
C1': (64.301,166.404,64.494)
C3': (63.539,168.633,64.793)
O5': (60.920,167.572,62.373)
O4': (63.103,166.576,63.766)
C5': (61.738,168.473,63.101)
P: (60.433,167.931,60.904)
C4': (62.429,167.766,64.240)
C2': (64.518,167.633,65.391)
O2': (64.245,167.347,66.748)
N1: (65.377,166.033,63.563)
O4: (68.412,165.024,61.117)
O2: (65.500,168.139,62.639)
C6: (65.858,164.750,63.559)
C5: (66.857,164.348,62.767)
O3': (62.998,169.515,65.758)
Image (generated by PyMOL):
PyMOL image
show in jmol