Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01003:0613
Extra
PDB:
ATOM 1 O3' C A1002 54.023 94.610 84.911 1.00 33.45 O
ATOM 2 P C A1003 55.168 95.735 84.992 1.00 31.93 P
ATOM 3 OP1 C A1003 55.810 95.820 83.671 1.00 34.98 O
ATOM 4 OP2 C A1003 55.989 95.406 86.182 1.00 36.32 O
ATOM 5 O5' C A1003 54.417 97.115 85.275 1.00 30.35 O
ATOM 6 C5' C A1003 53.555 97.283 86.413 1.00 30.10 C
ATOM 7 C4' C A1003 54.338 97.743 87.638 1.00 31.79 C
ATOM 8 O4' C A1003 54.797 99.128 87.490 1.00 30.42 O
ATOM 9 C3' C A1003 53.511 97.722 88.933 1.00 30.88 C
ATOM 10 O3' C A1003 54.317 97.348 90.042 1.00 30.65 O
ATOM 11 C2' C A1003 53.133 99.185 89.106 1.00 30.16 C
ATOM 12 O2' C A1003 52.820 99.526 90.434 1.00 28.78 O
ATOM 13 C1' C A1003 54.422 99.858 88.645 1.00 31.24 C
ATOM 14 N1 C A1003 54.282 101.299 88.332 1.00 34.07 N
ATOM 15 C2 C A1003 54.794 102.240 89.251 1.00 37.13 C
ATOM 16 O2 C A1003 55.394 101.837 90.267 1.00 44.24 O
ATOM 17 N3 C A1003 54.630 103.559 89.011 1.00 34.59 N
ATOM 18 C4 C A1003 54.006 103.960 87.908 1.00 34.24 C
ATOM 19 N4 C A1003 53.875 105.268 87.718 1.00 35.70 N
ATOM 20 C5 C A1003 53.492 103.035 86.950 1.00 33.99 C
ATOM 21 C6 C A1003 53.652 101.727 87.196 1.00 34.06 C
ATOM 22 P G A1004 54.711 95.807 90.268 1.00 33.27 P
ATOM 23 OP1 G A1004 55.959 95.778 91.059 1.00 37.63 O
ATOM 24 OP2 G A1004 54.663 95.112 88.967 1.00 35.10 O
ATOM 25 O5' G A1004 53.600 95.217 91.246 1.00 34.61 O
TER
ATOM 1 O3' U B 612 50.666 108.140 85.700 1.00 25.27 O
ATOM 2 P U B 613 50.337 106.572 85.796 1.00 28.71 P
ATOM 3 OP1 U B 613 51.572 105.849 85.375 1.00 24.45 O
ATOM 4 OP2 U B 613 49.055 106.307 85.096 1.00 24.53 O
ATOM 5 O5' U B 613 50.090 106.306 87.351 1.00 26.96 O
ATOM 6 C5' U B 613 51.147 106.476 88.288 1.00 27.09 C
ATOM 7 C4' U B 613 50.619 106.493 89.701 1.00 29.25 C
ATOM 8 O4' U B 613 49.598 107.514 89.848 1.00 31.34 O
ATOM 9 C3' U B 613 49.878 105.275 90.225 1.00 28.76 C
ATOM 10 O3' U B 613 50.753 104.187 90.509 1.00 29.19 O
ATOM 11 C2' U B 613 49.294 105.857 91.508 1.00 28.76 C
ATOM 12 O2' U B 613 50.278 106.044 92.504 1.00 28.97 O
ATOM 13 C1' U B 613 48.867 107.250 91.039 1.00 28.88 C
ATOM 14 N1 U B 613 47.423 107.320 90.766 1.00 28.53 N
ATOM 15 C2 U B 613 46.573 107.550 91.848 1.00 29.84 C
ATOM 16 O2 U B 613 46.968 107.735 92.986 1.00 33.13 O
ATOM 17 N3 U B 613 45.239 107.549 91.549 1.00 29.94 N
ATOM 18 C4 U B 613 44.669 107.349 90.318 1.00 30.38 C
ATOM 19 O4 U B 613 43.448 107.312 90.229 1.00 28.97 O
ATOM 20 C5 U B 613 45.601 107.142 89.246 1.00 30.04 C
ATOM 21 C6 U B 613 46.916 107.140 89.501 1.00 27.60 C
ATOM 22 P U B 614 50.310 102.681 90.139 1.00 28.08 P
ATOM 23 OP1 U B 614 51.487 101.793 90.290 1.00 26.67 O
ATOM 24 OP2 U B 614 49.582 102.703 88.847 1.00 27.19 O
ATOM 25 O5' U B 614 49.269 102.319 91.284 1.00 27.95 O
TER
ATOM 2 P C A1003 55.168 95.735 84.992 1.00 31.93 P
ATOM 3 OP1 C A1003 55.810 95.820 83.671 1.00 34.98 O
ATOM 4 OP2 C A1003 55.989 95.406 86.182 1.00 36.32 O
ATOM 5 O5' C A1003 54.417 97.115 85.275 1.00 30.35 O
ATOM 6 C5' C A1003 53.555 97.283 86.413 1.00 30.10 C
ATOM 7 C4' C A1003 54.338 97.743 87.638 1.00 31.79 C
ATOM 8 O4' C A1003 54.797 99.128 87.490 1.00 30.42 O
ATOM 9 C3' C A1003 53.511 97.722 88.933 1.00 30.88 C
ATOM 10 O3' C A1003 54.317 97.348 90.042 1.00 30.65 O
ATOM 11 C2' C A1003 53.133 99.185 89.106 1.00 30.16 C
ATOM 12 O2' C A1003 52.820 99.526 90.434 1.00 28.78 O
ATOM 13 C1' C A1003 54.422 99.858 88.645 1.00 31.24 C
ATOM 14 N1 C A1003 54.282 101.299 88.332 1.00 34.07 N
ATOM 15 C2 C A1003 54.794 102.240 89.251 1.00 37.13 C
ATOM 16 O2 C A1003 55.394 101.837 90.267 1.00 44.24 O
ATOM 17 N3 C A1003 54.630 103.559 89.011 1.00 34.59 N
ATOM 18 C4 C A1003 54.006 103.960 87.908 1.00 34.24 C
ATOM 19 N4 C A1003 53.875 105.268 87.718 1.00 35.70 N
ATOM 20 C5 C A1003 53.492 103.035 86.950 1.00 33.99 C
ATOM 21 C6 C A1003 53.652 101.727 87.196 1.00 34.06 C
ATOM 22 P G A1004 54.711 95.807 90.268 1.00 33.27 P
ATOM 23 OP1 G A1004 55.959 95.778 91.059 1.00 37.63 O
ATOM 24 OP2 G A1004 54.663 95.112 88.967 1.00 35.10 O
ATOM 25 O5' G A1004 53.600 95.217 91.246 1.00 34.61 O
TER
ATOM 1 O3' U B 612 50.666 108.140 85.700 1.00 25.27 O
ATOM 2 P U B 613 50.337 106.572 85.796 1.00 28.71 P
ATOM 3 OP1 U B 613 51.572 105.849 85.375 1.00 24.45 O
ATOM 4 OP2 U B 613 49.055 106.307 85.096 1.00 24.53 O
ATOM 5 O5' U B 613 50.090 106.306 87.351 1.00 26.96 O
ATOM 6 C5' U B 613 51.147 106.476 88.288 1.00 27.09 C
ATOM 7 C4' U B 613 50.619 106.493 89.701 1.00 29.25 C
ATOM 8 O4' U B 613 49.598 107.514 89.848 1.00 31.34 O
ATOM 9 C3' U B 613 49.878 105.275 90.225 1.00 28.76 C
ATOM 10 O3' U B 613 50.753 104.187 90.509 1.00 29.19 O
ATOM 11 C2' U B 613 49.294 105.857 91.508 1.00 28.76 C
ATOM 12 O2' U B 613 50.278 106.044 92.504 1.00 28.97 O
ATOM 13 C1' U B 613 48.867 107.250 91.039 1.00 28.88 C
ATOM 14 N1 U B 613 47.423 107.320 90.766 1.00 28.53 N
ATOM 15 C2 U B 613 46.573 107.550 91.848 1.00 29.84 C
ATOM 16 O2 U B 613 46.968 107.735 92.986 1.00 33.13 O
ATOM 17 N3 U B 613 45.239 107.549 91.549 1.00 29.94 N
ATOM 18 C4 U B 613 44.669 107.349 90.318 1.00 30.38 C
ATOM 19 O4 U B 613 43.448 107.312 90.229 1.00 28.97 O
ATOM 20 C5 U B 613 45.601 107.142 89.246 1.00 30.04 C
ATOM 21 C6 U B 613 46.916 107.140 89.501 1.00 27.60 C
ATOM 22 P U B 614 50.310 102.681 90.139 1.00 28.08 P
ATOM 23 OP1 U B 614 51.487 101.793 90.290 1.00 26.67 O
ATOM 24 OP2 U B 614 49.582 102.703 88.847 1.00 27.19 O
ATOM 25 O5' U B 614 49.269 102.319 91.284 1.00 27.95 O
TER
Atoms:
C2: (54.794,102.240,89.251)
OP1: (55.810,95.820,83.671)
OP2: (55.989,95.406,86.182)
C4: (54.006,103.960,87.908)
O5': (54.417,97.115,85.275)
C3': (53.511,97.722,88.933)
C1': (54.422,99.858,88.645)
O4': (54.797,99.128,87.490)
C5': (53.555,97.283,86.413)
P: (55.168,95.735,84.992)
O2: (55.394,101.837,90.267)
C4': (54.338,97.743,87.638)
C2': (53.133,99.185,89.106)
O2': (52.820,99.526,90.434)
N1: (54.282,101.299,88.332)
N3: (54.630,103.559,89.011)
N4: (53.875,105.268,87.718)
C6: (53.652,101.727,87.196)
C5: (53.492,103.035,86.950)
O3': (54.317,97.348,90.042)
OP1: (55.810,95.820,83.671)
OP2: (55.989,95.406,86.182)
C4: (54.006,103.960,87.908)
O5': (54.417,97.115,85.275)
C3': (53.511,97.722,88.933)
C1': (54.422,99.858,88.645)
O4': (54.797,99.128,87.490)
C5': (53.555,97.283,86.413)
P: (55.168,95.735,84.992)
O2: (55.394,101.837,90.267)
C4': (54.338,97.743,87.638)
C2': (53.133,99.185,89.106)
O2': (52.820,99.526,90.434)
N1: (54.282,101.299,88.332)
N3: (54.630,103.559,89.011)
N4: (53.875,105.268,87.718)
C6: (53.652,101.727,87.196)
C5: (53.492,103.035,86.950)
O3': (54.317,97.348,90.042)
C4: (44.669,107.349,90.318)
N3: (45.239,107.549,91.549)
OP1: (51.572,105.849,85.375)
OP2: (49.055,106.307,85.096)
C2: (46.573,107.550,91.848)
C1': (48.867,107.250,91.039)
C3': (49.878,105.275,90.225)
O5': (50.090,106.306,87.351)
O4': (49.598,107.514,89.848)
C5': (51.147,106.476,88.288)
P: (50.337,106.572,85.796)
C4': (50.619,106.493,89.701)
C2': (49.294,105.857,91.508)
O2': (50.278,106.044,92.504)
N1: (47.423,107.320,90.766)
O4: (43.448,107.312,90.229)
O2: (46.968,107.735,92.986)
C6: (46.916,107.140,89.501)
C5: (45.601,107.142,89.246)
O3': (50.753,104.187,90.509)
N3: (45.239,107.549,91.549)
OP1: (51.572,105.849,85.375)
OP2: (49.055,106.307,85.096)
C2: (46.573,107.550,91.848)
C1': (48.867,107.250,91.039)
C3': (49.878,105.275,90.225)
O5': (50.090,106.306,87.351)
O4': (49.598,107.514,89.848)
C5': (51.147,106.476,88.288)
P: (50.337,106.572,85.796)
C4': (50.619,106.493,89.701)
C2': (49.294,105.857,91.508)
O2': (50.278,106.044,92.504)
N1: (47.423,107.320,90.766)
O4: (43.448,107.312,90.229)
O2: (46.968,107.735,92.986)
C6: (46.916,107.140,89.501)
C5: (45.601,107.142,89.246)
O3': (50.753,104.187,90.509)
Image (generated by PyMOL):