Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01379:01378
Extra
PDB:
ATOM 1 O3' U A1378 63.249 170.650 65.724 1.00 37.25 O
ATOM 2 P C A1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 3 OP1 C A1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 4 OP2 C A1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 5 O5' C A1379 64.359 172.559 64.545 1.00 39.91 O
ATOM 6 C5' C A1379 65.600 172.785 65.258 1.00 41.22 C
ATOM 7 C4' C A1379 66.399 173.846 64.548 1.00 42.36 C
ATOM 8 O4' C A1379 66.828 173.344 63.259 1.00 42.38 O
ATOM 9 C3' C A1379 65.589 175.099 64.254 1.00 42.01 C
ATOM 10 O3' C A1379 65.705 176.016 65.334 1.00 41.72 O
ATOM 11 C2' C A1379 66.201 175.610 62.962 1.00 42.60 C
ATOM 12 O2' C A1379 67.396 176.326 63.190 1.00 42.63 O
ATOM 13 C1' C A1379 66.536 174.295 62.251 1.00 43.59 C
ATOM 14 N1 C A1379 65.491 173.722 61.366 1.00 45.40 N
ATOM 15 C2 C A1379 65.006 174.475 60.277 1.00 45.90 C
ATOM 16 O2 C A1379 65.411 175.632 60.109 1.00 48.70 O
ATOM 17 N3 C A1379 64.106 173.916 59.438 1.00 46.53 N
ATOM 18 C4 C A1379 63.679 172.668 59.651 1.00 47.16 C
ATOM 19 N4 C A1379 62.813 172.144 58.778 1.00 45.87 N
ATOM 20 C5 C A1379 64.125 171.896 60.764 1.00 45.52 C
ATOM 21 C6 C A1379 65.017 172.455 61.587 1.00 44.95 C
ATOM 22 P C A1380 64.405 176.769 65.887 1.00 40.86 P
ATOM 23 OP1 C A1380 64.854 177.537 67.073 1.00 41.19 O
ATOM 24 OP2 C A1380 63.290 175.800 66.019 1.00 42.21 O
ATOM 25 O5' C A1380 64.026 177.775 64.717 1.00 40.37 O
TER
ATOM 1 O3' U B1377 62.087 169.024 59.968 1.00 29.44 O
ATOM 2 P U B1378 60.763 168.953 60.862 1.00 35.08 P
ATOM 3 OP1 U B1378 59.962 167.779 60.405 1.00 41.75 O
ATOM 4 OP2 U B1378 60.132 170.294 60.902 1.00 36.31 O
ATOM 5 O5' U B1378 61.287 168.579 62.315 1.00 35.23 O
ATOM 6 C5' U B1378 62.018 169.527 63.077 1.00 35.43 C
ATOM 7 C4' U B1378 62.725 168.859 64.224 1.00 34.21 C
ATOM 8 O4' U B1378 63.432 167.690 63.757 1.00 33.93 O
ATOM 9 C3' U B1378 63.816 169.749 64.779 1.00 34.43 C
ATOM 10 O3' U B1378 63.249 170.650 65.724 1.00 37.25 O
ATOM 11 C2' U B1378 64.788 168.762 65.411 1.00 34.94 C
ATOM 12 O2' U B1378 64.445 168.453 66.742 1.00 39.12 O
ATOM 13 C1' U B1378 64.604 167.524 64.521 1.00 33.50 C
ATOM 14 N1 U B1378 65.702 167.141 63.622 1.00 33.09 N
ATOM 15 C2 U B1378 66.197 168.070 62.723 1.00 33.27 C
ATOM 16 O2 U B1378 65.758 169.197 62.622 1.00 34.59 O
ATOM 17 N3 U B1378 67.232 167.621 61.939 1.00 32.95 N
ATOM 18 C4 U B1378 67.803 166.365 61.954 1.00 33.25 C
ATOM 19 O4 U B1378 68.735 166.109 61.190 1.00 33.39 O
ATOM 20 C5 U B1378 67.228 165.463 62.898 1.00 34.35 C
ATOM 21 C6 U B1378 66.223 165.873 63.681 1.00 34.40 C
ATOM 22 P C B1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 23 OP1 C B1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 24 OP2 C B1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 25 O5' C B1379 64.359 172.559 64.545 1.00 39.91 O
TER
ATOM 2 P C A1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 3 OP1 C A1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 4 OP2 C A1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 5 O5' C A1379 64.359 172.559 64.545 1.00 39.91 O
ATOM 6 C5' C A1379 65.600 172.785 65.258 1.00 41.22 C
ATOM 7 C4' C A1379 66.399 173.846 64.548 1.00 42.36 C
ATOM 8 O4' C A1379 66.828 173.344 63.259 1.00 42.38 O
ATOM 9 C3' C A1379 65.589 175.099 64.254 1.00 42.01 C
ATOM 10 O3' C A1379 65.705 176.016 65.334 1.00 41.72 O
ATOM 11 C2' C A1379 66.201 175.610 62.962 1.00 42.60 C
ATOM 12 O2' C A1379 67.396 176.326 63.190 1.00 42.63 O
ATOM 13 C1' C A1379 66.536 174.295 62.251 1.00 43.59 C
ATOM 14 N1 C A1379 65.491 173.722 61.366 1.00 45.40 N
ATOM 15 C2 C A1379 65.006 174.475 60.277 1.00 45.90 C
ATOM 16 O2 C A1379 65.411 175.632 60.109 1.00 48.70 O
ATOM 17 N3 C A1379 64.106 173.916 59.438 1.00 46.53 N
ATOM 18 C4 C A1379 63.679 172.668 59.651 1.00 47.16 C
ATOM 19 N4 C A1379 62.813 172.144 58.778 1.00 45.87 N
ATOM 20 C5 C A1379 64.125 171.896 60.764 1.00 45.52 C
ATOM 21 C6 C A1379 65.017 172.455 61.587 1.00 44.95 C
ATOM 22 P C A1380 64.405 176.769 65.887 1.00 40.86 P
ATOM 23 OP1 C A1380 64.854 177.537 67.073 1.00 41.19 O
ATOM 24 OP2 C A1380 63.290 175.800 66.019 1.00 42.21 O
ATOM 25 O5' C A1380 64.026 177.775 64.717 1.00 40.37 O
TER
ATOM 1 O3' U B1377 62.087 169.024 59.968 1.00 29.44 O
ATOM 2 P U B1378 60.763 168.953 60.862 1.00 35.08 P
ATOM 3 OP1 U B1378 59.962 167.779 60.405 1.00 41.75 O
ATOM 4 OP2 U B1378 60.132 170.294 60.902 1.00 36.31 O
ATOM 5 O5' U B1378 61.287 168.579 62.315 1.00 35.23 O
ATOM 6 C5' U B1378 62.018 169.527 63.077 1.00 35.43 C
ATOM 7 C4' U B1378 62.725 168.859 64.224 1.00 34.21 C
ATOM 8 O4' U B1378 63.432 167.690 63.757 1.00 33.93 O
ATOM 9 C3' U B1378 63.816 169.749 64.779 1.00 34.43 C
ATOM 10 O3' U B1378 63.249 170.650 65.724 1.00 37.25 O
ATOM 11 C2' U B1378 64.788 168.762 65.411 1.00 34.94 C
ATOM 12 O2' U B1378 64.445 168.453 66.742 1.00 39.12 O
ATOM 13 C1' U B1378 64.604 167.524 64.521 1.00 33.50 C
ATOM 14 N1 U B1378 65.702 167.141 63.622 1.00 33.09 N
ATOM 15 C2 U B1378 66.197 168.070 62.723 1.00 33.27 C
ATOM 16 O2 U B1378 65.758 169.197 62.622 1.00 34.59 O
ATOM 17 N3 U B1378 67.232 167.621 61.939 1.00 32.95 N
ATOM 18 C4 U B1378 67.803 166.365 61.954 1.00 33.25 C
ATOM 19 O4 U B1378 68.735 166.109 61.190 1.00 33.39 O
ATOM 20 C5 U B1378 67.228 165.463 62.898 1.00 34.35 C
ATOM 21 C6 U B1378 66.223 165.873 63.681 1.00 34.40 C
ATOM 22 P C B1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 23 OP1 C B1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 24 OP2 C B1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 25 O5' C B1379 64.359 172.559 64.545 1.00 39.91 O
TER
Atoms:
C2: (65.006,174.475,60.277)
OP1: (62.959,172.953,66.588)
OP2: (61.895,172.290,64.356)
C4: (63.679,172.668,59.651)
O5': (64.359,172.559,64.545)
C3': (65.589,175.099,64.254)
C1': (66.536,174.295,62.251)
O4': (66.828,173.344,63.259)
C5': (65.600,172.785,65.258)
P: (63.017,172.186,65.318)
O2: (65.411,175.632,60.109)
C4': (66.399,173.846,64.548)
C2': (66.201,175.610,62.962)
O2': (67.396,176.326,63.190)
N1: (65.491,173.722,61.366)
N3: (64.106,173.916,59.438)
N4: (62.813,172.144,58.778)
C6: (65.017,172.455,61.587)
C5: (64.125,171.896,60.764)
O3': (65.705,176.016,65.334)
OP1: (62.959,172.953,66.588)
OP2: (61.895,172.290,64.356)
C4: (63.679,172.668,59.651)
O5': (64.359,172.559,64.545)
C3': (65.589,175.099,64.254)
C1': (66.536,174.295,62.251)
O4': (66.828,173.344,63.259)
C5': (65.600,172.785,65.258)
P: (63.017,172.186,65.318)
O2: (65.411,175.632,60.109)
C4': (66.399,173.846,64.548)
C2': (66.201,175.610,62.962)
O2': (67.396,176.326,63.190)
N1: (65.491,173.722,61.366)
N3: (64.106,173.916,59.438)
N4: (62.813,172.144,58.778)
C6: (65.017,172.455,61.587)
C5: (64.125,171.896,60.764)
O3': (65.705,176.016,65.334)
C4: (67.803,166.365,61.954)
N3: (67.232,167.621,61.939)
OP1: (59.962,167.779,60.405)
OP2: (60.132,170.294,60.902)
C2: (66.197,168.070,62.723)
C1': (64.604,167.524,64.521)
C3': (63.816,169.749,64.779)
O5': (61.287,168.579,62.315)
O4': (63.432,167.690,63.757)
C5': (62.018,169.527,63.077)
P: (60.763,168.953,60.862)
C4': (62.725,168.859,64.224)
C2': (64.788,168.762,65.411)
O2': (64.445,168.453,66.742)
N1: (65.702,167.141,63.622)
O4: (68.735,166.109,61.190)
O2: (65.758,169.197,62.622)
C6: (66.223,165.873,63.681)
C5: (67.228,165.463,62.898)
O3': (63.249,170.650,65.724)
N3: (67.232,167.621,61.939)
OP1: (59.962,167.779,60.405)
OP2: (60.132,170.294,60.902)
C2: (66.197,168.070,62.723)
C1': (64.604,167.524,64.521)
C3': (63.816,169.749,64.779)
O5': (61.287,168.579,62.315)
O4': (63.432,167.690,63.757)
C5': (62.018,169.527,63.077)
P: (60.763,168.953,60.862)
C4': (62.725,168.859,64.224)
C2': (64.788,168.762,65.411)
O2': (64.445,168.453,66.742)
N1: (65.702,167.141,63.622)
O4: (68.735,166.109,61.190)
O2: (65.758,169.197,62.622)
C6: (66.223,165.873,63.681)
C5: (67.228,165.463,62.898)
O3': (63.249,170.650,65.724)
Image (generated by PyMOL):