Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01948:01923
Extra
PDB:
ATOM 1 O3' G A1947 113.246 123.807 117.869 1.00 54.67 O
ATOM 2 P C A1948 113.331 122.586 116.832 1.00 58.22 P
ATOM 3 OP1 C A1948 114.772 122.244 116.702 1.00 58.55 O
ATOM 4 OP2 C A1948 112.549 122.933 115.616 1.00 58.75 O
ATOM 5 O5' C A1948 112.580 121.397 117.578 1.00 56.84 O
ATOM 6 C5' C A1948 113.029 120.931 118.855 1.00 56.31 C
ATOM 7 C4' C A1948 112.097 119.871 119.383 1.00 57.10 C
ATOM 8 O4' C A1948 110.784 120.436 119.630 1.00 57.84 O
ATOM 9 C3' C A1948 111.809 118.710 118.452 1.00 56.69 C
ATOM 10 O3' C A1948 112.855 117.756 118.477 1.00 58.35 O
ATOM 11 C2' C A1948 110.527 118.146 119.046 1.00 56.73 C
ATOM 12 O2' C A1948 110.752 117.364 120.194 1.00 56.64 O
ATOM 13 C1' C A1948 109.800 119.425 119.464 1.00 57.50 C
ATOM 14 N1 C A1948 108.811 119.864 118.461 1.00 58.21 N
ATOM 15 C2 C A1948 107.476 119.433 118.595 1.00 57.71 C
ATOM 16 O2 C A1948 107.163 118.714 119.561 1.00 56.30 O
ATOM 17 N3 C A1948 106.567 119.809 117.669 1.00 57.71 N
ATOM 18 C4 C A1948 106.937 120.577 116.642 1.00 57.98 C
ATOM 19 N4 C A1948 106.006 120.906 115.740 1.00 57.28 N
ATOM 20 C5 C A1948 108.279 121.038 116.489 1.00 58.04 C
ATOM 21 C6 C A1948 109.173 120.664 117.412 1.00 57.16 C
ATOM 22 P U A1949 113.167 116.880 117.169 1.00 60.93 P
ATOM 23 OP1 U A1949 113.935 115.682 117.593 1.00 59.69 O
ATOM 24 OP2 U A1949 113.726 117.790 116.133 1.00 59.36 O
ATOM 25 O5' U A1949 111.739 116.387 116.671 1.00 62.90 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
ATOM 2 P C A1948 113.331 122.586 116.832 1.00 58.22 P
ATOM 3 OP1 C A1948 114.772 122.244 116.702 1.00 58.55 O
ATOM 4 OP2 C A1948 112.549 122.933 115.616 1.00 58.75 O
ATOM 5 O5' C A1948 112.580 121.397 117.578 1.00 56.84 O
ATOM 6 C5' C A1948 113.029 120.931 118.855 1.00 56.31 C
ATOM 7 C4' C A1948 112.097 119.871 119.383 1.00 57.10 C
ATOM 8 O4' C A1948 110.784 120.436 119.630 1.00 57.84 O
ATOM 9 C3' C A1948 111.809 118.710 118.452 1.00 56.69 C
ATOM 10 O3' C A1948 112.855 117.756 118.477 1.00 58.35 O
ATOM 11 C2' C A1948 110.527 118.146 119.046 1.00 56.73 C
ATOM 12 O2' C A1948 110.752 117.364 120.194 1.00 56.64 O
ATOM 13 C1' C A1948 109.800 119.425 119.464 1.00 57.50 C
ATOM 14 N1 C A1948 108.811 119.864 118.461 1.00 58.21 N
ATOM 15 C2 C A1948 107.476 119.433 118.595 1.00 57.71 C
ATOM 16 O2 C A1948 107.163 118.714 119.561 1.00 56.30 O
ATOM 17 N3 C A1948 106.567 119.809 117.669 1.00 57.71 N
ATOM 18 C4 C A1948 106.937 120.577 116.642 1.00 57.98 C
ATOM 19 N4 C A1948 106.006 120.906 115.740 1.00 57.28 N
ATOM 20 C5 C A1948 108.279 121.038 116.489 1.00 58.04 C
ATOM 21 C6 C A1948 109.173 120.664 117.412 1.00 57.16 C
ATOM 22 P U A1949 113.167 116.880 117.169 1.00 60.93 P
ATOM 23 OP1 U A1949 113.935 115.682 117.593 1.00 59.69 O
ATOM 24 OP2 U A1949 113.726 117.790 116.133 1.00 59.36 O
ATOM 25 O5' U A1949 111.739 116.387 116.671 1.00 62.90 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
Atoms:
C2: (107.476,119.433,118.595)
OP1: (114.772,122.244,116.702)
OP2: (112.549,122.933,115.616)
C4: (106.937,120.577,116.642)
O5': (112.580,121.397,117.578)
C3': (111.809,118.710,118.452)
C1': (109.800,119.425,119.464)
O4': (110.784,120.436,119.630)
C5': (113.029,120.931,118.855)
P: (113.331,122.586,116.832)
O2: (107.163,118.714,119.561)
C4': (112.097,119.871,119.383)
C2': (110.527,118.146,119.046)
O2': (110.752,117.364,120.194)
N1: (108.811,119.864,118.461)
N3: (106.567,119.809,117.669)
N4: (106.006,120.906,115.740)
C6: (109.173,120.664,117.412)
C5: (108.279,121.038,116.489)
O3': (112.855,117.756,118.477)
OP1: (114.772,122.244,116.702)
OP2: (112.549,122.933,115.616)
C4: (106.937,120.577,116.642)
O5': (112.580,121.397,117.578)
C3': (111.809,118.710,118.452)
C1': (109.800,119.425,119.464)
O4': (110.784,120.436,119.630)
C5': (113.029,120.931,118.855)
P: (113.331,122.586,116.832)
O2: (107.163,118.714,119.561)
C4': (112.097,119.871,119.383)
C2': (110.527,118.146,119.046)
O2': (110.752,117.364,120.194)
N1: (108.811,119.864,118.461)
N3: (106.567,119.809,117.669)
N4: (106.006,120.906,115.740)
C6: (109.173,120.664,117.412)
C5: (108.279,121.038,116.489)
O3': (112.855,117.756,118.477)
C4: (102.666,116.026,115.809)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
Image (generated by PyMOL):