Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01003:0613
Extra
PDB:
ATOM 1 O3' C A1002 54.005 94.528 84.840 1.00 30.37 O
ATOM 2 P C A1003 55.183 95.608 84.894 1.00 28.88 P
ATOM 3 OP1 C A1003 55.721 95.763 83.524 1.00 34.09 O
ATOM 4 OP2 C A1003 56.075 95.173 85.983 1.00 31.97 O
ATOM 5 O5' C A1003 54.497 96.989 85.312 1.00 30.89 O
ATOM 6 C5' C A1003 53.626 97.090 86.458 1.00 31.63 C
ATOM 7 C4' C A1003 54.388 97.574 87.683 1.00 31.66 C
ATOM 8 O4' C A1003 54.859 98.946 87.506 1.00 31.95 O
ATOM 9 C3' C A1003 53.569 97.584 88.977 1.00 30.86 C
ATOM 10 O3' C A1003 54.396 97.182 90.058 1.00 29.50 O
ATOM 11 C2' C A1003 53.207 99.055 89.136 1.00 30.15 C
ATOM 12 O2' C A1003 52.940 99.424 90.473 1.00 29.64 O
ATOM 13 C1' C A1003 54.486 99.713 88.635 1.00 31.38 C
ATOM 14 N1 C A1003 54.349 101.137 88.263 1.00 33.90 N
ATOM 15 C2 C A1003 54.808 102.117 89.170 1.00 35.57 C
ATOM 16 O2 C A1003 55.351 101.760 90.231 1.00 39.26 O
ATOM 17 N3 C A1003 54.654 103.422 88.867 1.00 34.39 N
ATOM 18 C4 C A1003 54.085 103.774 87.717 1.00 35.43 C
ATOM 19 N4 C A1003 53.948 105.076 87.470 1.00 37.62 N
ATOM 20 C5 C A1003 53.628 102.807 86.770 1.00 33.70 C
ATOM 21 C6 C A1003 53.778 101.514 87.080 1.00 33.48 C
ATOM 22 P G A1004 54.777 95.633 90.230 1.00 32.81 P
ATOM 23 OP1 G A1004 56.093 95.557 90.904 1.00 36.19 O
ATOM 24 OP2 G A1004 54.588 94.966 88.922 1.00 32.38 O
ATOM 25 O5' G A1004 53.716 95.044 91.264 1.00 32.06 O
TER
ATOM 1 O3' U B 612 50.754 107.950 85.647 1.00 25.11 O
ATOM 2 P U B 613 50.459 106.377 85.769 1.00 26.39 P
ATOM 3 OP1 U B 613 51.735 105.676 85.433 1.00 23.36 O
ATOM 4 OP2 U B 613 49.230 106.075 84.992 1.00 24.70 O
ATOM 5 O5' U B 613 50.153 106.152 87.318 1.00 26.32 O
ATOM 6 C5' U B 613 51.181 106.357 88.293 1.00 28.09 C
ATOM 7 C4' U B 613 50.619 106.320 89.692 1.00 29.17 C
ATOM 8 O4' U B 613 49.578 107.315 89.843 1.00 31.61 O
ATOM 9 C3' U B 613 49.876 105.079 90.141 1.00 29.25 C
ATOM 10 O3' U B 613 50.757 104.006 90.423 1.00 29.74 O
ATOM 11 C2' U B 613 49.236 105.594 91.424 1.00 29.48 C
ATOM 12 O2' U B 613 50.169 105.713 92.473 1.00 30.64 O
ATOM 13 C1' U B 613 48.836 107.012 91.011 1.00 30.36 C
ATOM 14 N1 U B 613 47.400 107.099 90.718 1.00 31.84 N
ATOM 15 C2 U B 613 46.539 107.256 91.796 1.00 33.30 C
ATOM 16 O2 U B 613 46.925 107.380 92.948 1.00 35.39 O
ATOM 17 N3 U B 613 45.208 107.255 91.477 1.00 32.78 N
ATOM 18 C4 U B 613 44.658 107.117 90.231 1.00 33.33 C
ATOM 19 O4 U B 613 43.439 107.008 90.126 1.00 35.19 O
ATOM 20 C5 U B 613 45.609 106.994 89.167 1.00 33.94 C
ATOM 21 C6 U B 613 46.915 106.995 89.440 1.00 31.56 C
ATOM 22 P U B 614 50.310 102.501 90.088 1.00 28.67 P
ATOM 23 OP1 U B 614 51.475 101.609 90.327 1.00 25.96 O
ATOM 24 OP2 U B 614 49.652 102.509 88.757 1.00 27.54 O
ATOM 25 O5' U B 614 49.207 102.193 91.188 1.00 28.11 O
TER
ATOM 2 P C A1003 55.183 95.608 84.894 1.00 28.88 P
ATOM 3 OP1 C A1003 55.721 95.763 83.524 1.00 34.09 O
ATOM 4 OP2 C A1003 56.075 95.173 85.983 1.00 31.97 O
ATOM 5 O5' C A1003 54.497 96.989 85.312 1.00 30.89 O
ATOM 6 C5' C A1003 53.626 97.090 86.458 1.00 31.63 C
ATOM 7 C4' C A1003 54.388 97.574 87.683 1.00 31.66 C
ATOM 8 O4' C A1003 54.859 98.946 87.506 1.00 31.95 O
ATOM 9 C3' C A1003 53.569 97.584 88.977 1.00 30.86 C
ATOM 10 O3' C A1003 54.396 97.182 90.058 1.00 29.50 O
ATOM 11 C2' C A1003 53.207 99.055 89.136 1.00 30.15 C
ATOM 12 O2' C A1003 52.940 99.424 90.473 1.00 29.64 O
ATOM 13 C1' C A1003 54.486 99.713 88.635 1.00 31.38 C
ATOM 14 N1 C A1003 54.349 101.137 88.263 1.00 33.90 N
ATOM 15 C2 C A1003 54.808 102.117 89.170 1.00 35.57 C
ATOM 16 O2 C A1003 55.351 101.760 90.231 1.00 39.26 O
ATOM 17 N3 C A1003 54.654 103.422 88.867 1.00 34.39 N
ATOM 18 C4 C A1003 54.085 103.774 87.717 1.00 35.43 C
ATOM 19 N4 C A1003 53.948 105.076 87.470 1.00 37.62 N
ATOM 20 C5 C A1003 53.628 102.807 86.770 1.00 33.70 C
ATOM 21 C6 C A1003 53.778 101.514 87.080 1.00 33.48 C
ATOM 22 P G A1004 54.777 95.633 90.230 1.00 32.81 P
ATOM 23 OP1 G A1004 56.093 95.557 90.904 1.00 36.19 O
ATOM 24 OP2 G A1004 54.588 94.966 88.922 1.00 32.38 O
ATOM 25 O5' G A1004 53.716 95.044 91.264 1.00 32.06 O
TER
ATOM 1 O3' U B 612 50.754 107.950 85.647 1.00 25.11 O
ATOM 2 P U B 613 50.459 106.377 85.769 1.00 26.39 P
ATOM 3 OP1 U B 613 51.735 105.676 85.433 1.00 23.36 O
ATOM 4 OP2 U B 613 49.230 106.075 84.992 1.00 24.70 O
ATOM 5 O5' U B 613 50.153 106.152 87.318 1.00 26.32 O
ATOM 6 C5' U B 613 51.181 106.357 88.293 1.00 28.09 C
ATOM 7 C4' U B 613 50.619 106.320 89.692 1.00 29.17 C
ATOM 8 O4' U B 613 49.578 107.315 89.843 1.00 31.61 O
ATOM 9 C3' U B 613 49.876 105.079 90.141 1.00 29.25 C
ATOM 10 O3' U B 613 50.757 104.006 90.423 1.00 29.74 O
ATOM 11 C2' U B 613 49.236 105.594 91.424 1.00 29.48 C
ATOM 12 O2' U B 613 50.169 105.713 92.473 1.00 30.64 O
ATOM 13 C1' U B 613 48.836 107.012 91.011 1.00 30.36 C
ATOM 14 N1 U B 613 47.400 107.099 90.718 1.00 31.84 N
ATOM 15 C2 U B 613 46.539 107.256 91.796 1.00 33.30 C
ATOM 16 O2 U B 613 46.925 107.380 92.948 1.00 35.39 O
ATOM 17 N3 U B 613 45.208 107.255 91.477 1.00 32.78 N
ATOM 18 C4 U B 613 44.658 107.117 90.231 1.00 33.33 C
ATOM 19 O4 U B 613 43.439 107.008 90.126 1.00 35.19 O
ATOM 20 C5 U B 613 45.609 106.994 89.167 1.00 33.94 C
ATOM 21 C6 U B 613 46.915 106.995 89.440 1.00 31.56 C
ATOM 22 P U B 614 50.310 102.501 90.088 1.00 28.67 P
ATOM 23 OP1 U B 614 51.475 101.609 90.327 1.00 25.96 O
ATOM 24 OP2 U B 614 49.652 102.509 88.757 1.00 27.54 O
ATOM 25 O5' U B 614 49.207 102.193 91.188 1.00 28.11 O
TER
Atoms:
C2: (54.808,102.117,89.170)
OP1: (55.721,95.763,83.524)
OP2: (56.075,95.173,85.983)
C4: (54.085,103.774,87.717)
O5': (54.497,96.989,85.312)
C3': (53.569,97.584,88.977)
C1': (54.486,99.713,88.635)
O4': (54.859,98.946,87.506)
C5': (53.626,97.090,86.458)
P: (55.183,95.608,84.894)
O2: (55.351,101.760,90.231)
C4': (54.388,97.574,87.683)
C2': (53.207,99.055,89.136)
O2': (52.940,99.424,90.473)
N1: (54.349,101.137,88.263)
N3: (54.654,103.422,88.867)
N4: (53.948,105.076,87.470)
C6: (53.778,101.514,87.080)
C5: (53.628,102.807,86.770)
O3': (54.396,97.182,90.058)
OP1: (55.721,95.763,83.524)
OP2: (56.075,95.173,85.983)
C4: (54.085,103.774,87.717)
O5': (54.497,96.989,85.312)
C3': (53.569,97.584,88.977)
C1': (54.486,99.713,88.635)
O4': (54.859,98.946,87.506)
C5': (53.626,97.090,86.458)
P: (55.183,95.608,84.894)
O2: (55.351,101.760,90.231)
C4': (54.388,97.574,87.683)
C2': (53.207,99.055,89.136)
O2': (52.940,99.424,90.473)
N1: (54.349,101.137,88.263)
N3: (54.654,103.422,88.867)
N4: (53.948,105.076,87.470)
C6: (53.778,101.514,87.080)
C5: (53.628,102.807,86.770)
O3': (54.396,97.182,90.058)
C4: (44.658,107.117,90.231)
N3: (45.208,107.255,91.477)
OP1: (51.735,105.676,85.433)
OP2: (49.230,106.075,84.992)
C2: (46.539,107.256,91.796)
C1': (48.836,107.012,91.011)
C3': (49.876,105.079,90.141)
O5': (50.153,106.152,87.318)
O4': (49.578,107.315,89.843)
C5': (51.181,106.357,88.293)
P: (50.459,106.377,85.769)
C4': (50.619,106.320,89.692)
C2': (49.236,105.594,91.424)
O2': (50.169,105.713,92.473)
N1: (47.400,107.099,90.718)
O4: (43.439,107.008,90.126)
O2: (46.925,107.380,92.948)
C6: (46.915,106.995,89.440)
C5: (45.609,106.994,89.167)
O3': (50.757,104.006,90.423)
N3: (45.208,107.255,91.477)
OP1: (51.735,105.676,85.433)
OP2: (49.230,106.075,84.992)
C2: (46.539,107.256,91.796)
C1': (48.836,107.012,91.011)
C3': (49.876,105.079,90.141)
O5': (50.153,106.152,87.318)
O4': (49.578,107.315,89.843)
C5': (51.181,106.357,88.293)
P: (50.459,106.377,85.769)
C4': (50.619,106.320,89.692)
C2': (49.236,105.594,91.424)
O2': (50.169,105.713,92.473)
N1: (47.400,107.099,90.718)
O4: (43.439,107.008,90.126)
O2: (46.925,107.380,92.948)
C6: (46.915,106.995,89.440)
C5: (45.609,106.994,89.167)
O3': (50.757,104.006,90.423)
Image (generated by PyMOL):