Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01948:01923
Extra
PDB:
ATOM 1 O3' G A1947 113.442 123.623 117.728 1.00 53.23 O
ATOM 2 P C A1948 113.547 122.386 116.709 1.00 56.08 P
ATOM 3 OP1 C A1948 114.987 122.054 116.609 1.00 56.70 O
ATOM 4 OP2 C A1948 112.782 122.693 115.473 1.00 57.51 O
ATOM 5 O5' C A1948 112.797 121.205 117.465 1.00 53.58 O
ATOM 6 C5' C A1948 113.253 120.748 118.738 1.00 53.41 C
ATOM 7 C4' C A1948 112.334 119.681 119.263 1.00 53.87 C
ATOM 8 O4' C A1948 111.017 120.239 119.495 1.00 54.90 O
ATOM 9 C3' C A1948 112.064 118.530 118.317 1.00 53.54 C
ATOM 10 O3' C A1948 113.115 117.580 118.337 1.00 53.95 O
ATOM 11 C2' C A1948 110.775 117.954 118.881 1.00 54.37 C
ATOM 12 O2' C A1948 110.991 117.133 120.007 1.00 54.63 O
ATOM 13 C1' C A1948 110.040 119.225 119.312 1.00 55.61 C
ATOM 14 N1 C A1948 109.041 119.678 118.325 1.00 56.55 N
ATOM 15 C2 C A1948 107.710 119.247 118.465 1.00 56.47 C
ATOM 16 O2 C A1948 107.406 118.519 119.423 1.00 56.36 O
ATOM 17 N3 C A1948 106.792 119.637 117.554 1.00 56.52 N
ATOM 18 C4 C A1948 107.151 120.426 116.539 1.00 57.21 C
ATOM 19 N4 C A1948 106.211 120.780 115.659 1.00 58.06 N
ATOM 20 C5 C A1948 108.490 120.887 116.379 1.00 57.02 C
ATOM 21 C6 C A1948 109.393 120.493 117.286 1.00 56.50 C
ATOM 22 P U A1949 113.438 116.723 117.019 1.00 56.04 P
ATOM 23 OP1 U A1949 114.182 115.510 117.436 1.00 55.61 O
ATOM 24 OP2 U A1949 114.029 117.645 116.014 1.00 54.58 O
ATOM 25 O5' U A1949 112.010 116.252 116.490 1.00 60.06 O
TER
ATOM 1 O3' G B1922 105.949 121.842 110.265 1.00 44.95 O
ATOM 2 P U B1923 105.412 121.627 111.763 1.00 46.58 P
ATOM 3 OP1 U B1923 104.479 122.737 112.098 1.00 45.89 O
ATOM 4 OP2 U B1923 106.578 121.365 112.641 1.00 47.41 O
ATOM 5 O5' U B1923 104.563 120.283 111.678 1.00 45.71 O
ATOM 6 C5' U B1923 103.702 120.033 110.558 1.00 43.71 C
ATOM 7 C4' U B1923 102.272 119.889 111.010 1.00 41.77 C
ATOM 8 O4' U B1923 102.092 118.616 111.683 1.00 42.10 O
ATOM 9 C3' U B1923 101.736 120.959 111.952 1.00 40.75 C
ATOM 10 O3' U B1923 100.392 121.230 111.611 1.00 42.30 O
ATOM 11 C2' U B1923 101.786 120.267 113.311 1.00 42.15 C
ATOM 12 O2' U B1923 100.807 120.748 114.212 1.00 41.84 O
ATOM 13 C1' U B1923 101.469 118.825 112.929 1.00 42.24 C
ATOM 14 N1 U B1923 101.962 117.810 113.871 1.00 44.90 N
ATOM 15 C2 U B1923 101.027 116.977 114.465 1.00 47.46 C
ATOM 16 O2 U B1923 99.829 117.058 114.252 1.00 49.24 O
ATOM 17 N3 U B1923 101.546 116.042 115.319 1.00 48.80 N
ATOM 18 C4 U B1923 102.872 115.855 115.639 1.00 50.05 C
ATOM 19 O4 U B1923 103.182 114.946 116.414 1.00 53.78 O
ATOM 20 C5 U B1923 103.777 116.757 114.993 1.00 47.53 C
ATOM 21 C6 U B1923 103.303 117.679 114.154 1.00 45.38 C
ATOM 22 P A B1924 99.994 122.676 111.047 1.00 44.01 P
ATOM 23 OP1 A B1924 100.369 123.683 112.073 1.00 45.35 O
ATOM 24 OP2 A B1924 98.589 122.610 110.567 1.00 45.39 O
ATOM 25 O5' A B1924 100.941 122.855 109.782 1.00 42.68 O
TER
ATOM 2 P C A1948 113.547 122.386 116.709 1.00 56.08 P
ATOM 3 OP1 C A1948 114.987 122.054 116.609 1.00 56.70 O
ATOM 4 OP2 C A1948 112.782 122.693 115.473 1.00 57.51 O
ATOM 5 O5' C A1948 112.797 121.205 117.465 1.00 53.58 O
ATOM 6 C5' C A1948 113.253 120.748 118.738 1.00 53.41 C
ATOM 7 C4' C A1948 112.334 119.681 119.263 1.00 53.87 C
ATOM 8 O4' C A1948 111.017 120.239 119.495 1.00 54.90 O
ATOM 9 C3' C A1948 112.064 118.530 118.317 1.00 53.54 C
ATOM 10 O3' C A1948 113.115 117.580 118.337 1.00 53.95 O
ATOM 11 C2' C A1948 110.775 117.954 118.881 1.00 54.37 C
ATOM 12 O2' C A1948 110.991 117.133 120.007 1.00 54.63 O
ATOM 13 C1' C A1948 110.040 119.225 119.312 1.00 55.61 C
ATOM 14 N1 C A1948 109.041 119.678 118.325 1.00 56.55 N
ATOM 15 C2 C A1948 107.710 119.247 118.465 1.00 56.47 C
ATOM 16 O2 C A1948 107.406 118.519 119.423 1.00 56.36 O
ATOM 17 N3 C A1948 106.792 119.637 117.554 1.00 56.52 N
ATOM 18 C4 C A1948 107.151 120.426 116.539 1.00 57.21 C
ATOM 19 N4 C A1948 106.211 120.780 115.659 1.00 58.06 N
ATOM 20 C5 C A1948 108.490 120.887 116.379 1.00 57.02 C
ATOM 21 C6 C A1948 109.393 120.493 117.286 1.00 56.50 C
ATOM 22 P U A1949 113.438 116.723 117.019 1.00 56.04 P
ATOM 23 OP1 U A1949 114.182 115.510 117.436 1.00 55.61 O
ATOM 24 OP2 U A1949 114.029 117.645 116.014 1.00 54.58 O
ATOM 25 O5' U A1949 112.010 116.252 116.490 1.00 60.06 O
TER
ATOM 1 O3' G B1922 105.949 121.842 110.265 1.00 44.95 O
ATOM 2 P U B1923 105.412 121.627 111.763 1.00 46.58 P
ATOM 3 OP1 U B1923 104.479 122.737 112.098 1.00 45.89 O
ATOM 4 OP2 U B1923 106.578 121.365 112.641 1.00 47.41 O
ATOM 5 O5' U B1923 104.563 120.283 111.678 1.00 45.71 O
ATOM 6 C5' U B1923 103.702 120.033 110.558 1.00 43.71 C
ATOM 7 C4' U B1923 102.272 119.889 111.010 1.00 41.77 C
ATOM 8 O4' U B1923 102.092 118.616 111.683 1.00 42.10 O
ATOM 9 C3' U B1923 101.736 120.959 111.952 1.00 40.75 C
ATOM 10 O3' U B1923 100.392 121.230 111.611 1.00 42.30 O
ATOM 11 C2' U B1923 101.786 120.267 113.311 1.00 42.15 C
ATOM 12 O2' U B1923 100.807 120.748 114.212 1.00 41.84 O
ATOM 13 C1' U B1923 101.469 118.825 112.929 1.00 42.24 C
ATOM 14 N1 U B1923 101.962 117.810 113.871 1.00 44.90 N
ATOM 15 C2 U B1923 101.027 116.977 114.465 1.00 47.46 C
ATOM 16 O2 U B1923 99.829 117.058 114.252 1.00 49.24 O
ATOM 17 N3 U B1923 101.546 116.042 115.319 1.00 48.80 N
ATOM 18 C4 U B1923 102.872 115.855 115.639 1.00 50.05 C
ATOM 19 O4 U B1923 103.182 114.946 116.414 1.00 53.78 O
ATOM 20 C5 U B1923 103.777 116.757 114.993 1.00 47.53 C
ATOM 21 C6 U B1923 103.303 117.679 114.154 1.00 45.38 C
ATOM 22 P A B1924 99.994 122.676 111.047 1.00 44.01 P
ATOM 23 OP1 A B1924 100.369 123.683 112.073 1.00 45.35 O
ATOM 24 OP2 A B1924 98.589 122.610 110.567 1.00 45.39 O
ATOM 25 O5' A B1924 100.941 122.855 109.782 1.00 42.68 O
TER
Atoms:
C2: (107.710,119.247,118.465)
OP1: (114.987,122.054,116.609)
OP2: (112.782,122.693,115.473)
C4: (107.151,120.426,116.539)
O5': (112.797,121.205,117.465)
C3': (112.064,118.530,118.317)
C1': (110.040,119.225,119.312)
O4': (111.017,120.239,119.495)
C5': (113.253,120.748,118.738)
P: (113.547,122.386,116.709)
O2: (107.406,118.519,119.423)
C4': (112.334,119.681,119.263)
C2': (110.775,117.954,118.881)
O2': (110.991,117.133,120.007)
N1: (109.041,119.678,118.325)
N3: (106.792,119.637,117.554)
N4: (106.211,120.780,115.659)
C6: (109.393,120.493,117.286)
C5: (108.490,120.887,116.379)
O3': (113.115,117.580,118.337)
OP1: (114.987,122.054,116.609)
OP2: (112.782,122.693,115.473)
C4: (107.151,120.426,116.539)
O5': (112.797,121.205,117.465)
C3': (112.064,118.530,118.317)
C1': (110.040,119.225,119.312)
O4': (111.017,120.239,119.495)
C5': (113.253,120.748,118.738)
P: (113.547,122.386,116.709)
O2: (107.406,118.519,119.423)
C4': (112.334,119.681,119.263)
C2': (110.775,117.954,118.881)
O2': (110.991,117.133,120.007)
N1: (109.041,119.678,118.325)
N3: (106.792,119.637,117.554)
N4: (106.211,120.780,115.659)
C6: (109.393,120.493,117.286)
C5: (108.490,120.887,116.379)
O3': (113.115,117.580,118.337)
C4: (102.872,115.855,115.639)
N3: (101.546,116.042,115.319)
OP1: (104.479,122.737,112.098)
OP2: (106.578,121.365,112.641)
C2: (101.027,116.977,114.465)
C1': (101.469,118.825,112.929)
C3': (101.736,120.959,111.952)
O5': (104.563,120.283,111.678)
O4': (102.092,118.616,111.683)
C5': (103.702,120.033,110.558)
P: (105.412,121.627,111.763)
C4': (102.272,119.889,111.010)
C2': (101.786,120.267,113.311)
O2': (100.807,120.748,114.212)
N1: (101.962,117.810,113.871)
O4: (103.182,114.946,116.414)
O2: (99.829,117.058,114.252)
C6: (103.303,117.679,114.154)
C5: (103.777,116.757,114.993)
O3': (100.392,121.230,111.611)
N3: (101.546,116.042,115.319)
OP1: (104.479,122.737,112.098)
OP2: (106.578,121.365,112.641)
C2: (101.027,116.977,114.465)
C1': (101.469,118.825,112.929)
C3': (101.736,120.959,111.952)
O5': (104.563,120.283,111.678)
O4': (102.092,118.616,111.683)
C5': (103.702,120.033,110.558)
P: (105.412,121.627,111.763)
C4': (102.272,119.889,111.010)
C2': (101.786,120.267,113.311)
O2': (100.807,120.748,114.212)
N1: (101.962,117.810,113.871)
O4: (103.182,114.946,116.414)
O2: (99.829,117.058,114.252)
C6: (103.303,117.679,114.154)
C5: (103.777,116.757,114.993)
O3': (100.392,121.230,111.611)
Image (generated by PyMOL):